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PDB: 52230 results

8JFC
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V1/S quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 6 (B21591), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 4-[3-[[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]methyl]phenyl]benzoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Saepua, S, Thongpanchang, C, Yuthavong, Y, Kamchonwongpaisan, S, Hoarau, M.
Deposit date:2023-05-17
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of rigid biphenyl Plasmodium falciparum DHFR inhibitors using a fragment linking strategy.
Rsc Med Chem, 14, 2023
8IQK
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Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival proteins
Descriptor: Bcl-2-like protein 1, Bcl-2-modifying factor
Authors:Wang, H, Guo, M, Wei, H, Chen, Y.
Deposit date:2023-03-16
Release date:2023-08-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.879 Å)
Cite:Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival Bcl-2 family proteins.
Comput Struct Biotechnol J, 21, 2023
8IQL
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Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival proteins
Descriptor: Apoptosis regulator Bcl-2, Bcl-2-modifying factor
Authors:Wang, H, Guo, M, Wei, H, Chen, Y.
Deposit date:2023-03-16
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.9577 Å)
Cite:Structural basis of the specificity and interaction mechanism of Bmf binding to pro-survival Bcl-2 family proteins.
Comput Struct Biotechnol J, 21, 2023
8JFB
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V1/S quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 4 (B21588), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 3-[4-[[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]methyl]phenyl]benzoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Saepua, S, Thongpanchang, C, Yuthavong, Y, Kamchonwongpaisan, S, Hoarau, M.
Deposit date:2023-05-17
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of rigid biphenyl Plasmodium falciparum DHFR inhibitors using a fragment linking strategy.
Rsc Med Chem, 14, 2023
8JFD
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V1/S quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 8 (B21594), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 3-[3-[[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]methyl]phenyl]benzoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Saepua, S, Thongpanchang, C, Yuthavong, Y, Kamchonwongpaisan, S, Hoarau, M.
Deposit date:2023-05-17
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of rigid biphenyl Plasmodium falciparum DHFR inhibitors using a fragment linking strategy.
Rsc Med Chem, 14, 2023
8RFN
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BU of 8rfn by Molmil
Human NOQ1 enzyme in its holo form by serial crystallography
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1
Authors:Martin-Garcia, J.M, Grieco, A, Medina, M, Boneta, S, Pey, A.L.
Deposit date:2023-12-13
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural dynamics and functional cooperativity of human NQO1 by ambient temperature serial crystallography and simulations.
Protein Sci., 33, 2024
5X7P
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Crystal structure of Paenibacillus sp. 598K alpha-1,6-glucosyltransferase complexed with acarbose
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Fujimoto, Z, Kishine, N, Suzuki, N, Momma, M, Ichinose, H, Kimura, A, Funane, K.
Deposit date:2017-02-27
Release date:2017-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Carbohydrate-binding architecture of the multi-modular alpha-1,6-glucosyltransferase from Paenibacillus sp. 598K, which produces alpha-1,6-glucosyl-alpha-glucosaccharides from starch
Biochem. J., 474, 2017
8RPJ
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JanthE from Janthinobacterium sp. HH01
Descriptor: ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Lanza, L, Leogrande, C, Rabe von Pappenheim, F, Tittmann, K, Mueller, M.
Deposit date:2024-01-16
Release date:2024-06-12
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification and Characterization of Thiamine Diphosphate-Dependent Lyases with an Unusual CDG Motif.
Angew.Chem.Int.Ed.Engl., 63, 2024
8RPI
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JanthE from Janthinobacterium sp. HH01, lactyl-ThDP
Descriptor: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-CARBOXY-1-HYDROXYETHYL)-5-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Lanza, L, Leogrande, C, Rabe von Pappenheim, F, Tittmann, K, Mueller, M.
Deposit date:2024-01-16
Release date:2024-06-12
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Identification and Characterization of Thiamine Diphosphate-Dependent Lyases with an Unusual CDG Motif.
Angew.Chem.Int.Ed.Engl., 63, 2024
8JIA
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BU of 8jia by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP bound FtsE(E165Q)X/RipC complex in peptidisc
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
Authors:Li, J, Xu, X, Luo, M.
Deposit date:2023-05-26
Release date:2023-10-04
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Regulation of the cell division hydrolase RipC by the FtsEX system in Mycobacterium tuberculosis.
Nat Commun, 14, 2023
3DR0
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BU of 3dr0 by Molmil
Structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002
Descriptor: Cytochrome c6, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Bialek, W, Krzywda, S, Jaskolski, M, Szczepaniak, A.
Deposit date:2008-07-10
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Atomic-resolution structure of reduced cyanobacterial cytochrome c6 with an unusual sequence insertion
Febs J., 276, 2009
8IYB
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BU of 8iyb by Molmil
Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, ...
Authors:Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M.
Deposit date:2023-04-04
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii.
Int.J.Biol.Macromol., 253, 2023
8J83
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Crystal structure of formate dehydrogenase from Methylorubrum extorquens AM1
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Kobayashi, A, Taketa, M, Sowa, K, Kano, K, Higuchi, Y, Ogata, H.
Deposit date:2023-04-29
Release date:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and function relationship of formate dehydrogenases: an overview of recent progress.
Iucrj, 10, 2023
7VXR
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BU of 7vxr by Molmil
Crystal structure of BPSL1038 from Burkholderia pseudomallei
Descriptor: BPSL1038, SODIUM ION
Authors:Shaibullah, S, Mohd-Sharif, M, Ho, K.L, Firdaus-Raih, M, Nathan, S, Mohamed, R, Teh, A.K, Waterman, J, Ng, C.L.
Deposit date:2021-11-13
Release date:2023-08-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and functional analyses of Burkholderia pseudomallei BPSL1038 reveal a Cas-2/VapD nuclease sub-family.
Commun Biol, 6, 2023
8IYC
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BU of 8iyc by Molmil
Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M.
Deposit date:2023-04-04
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii.
Int.J.Biol.Macromol., 253, 2023
8IY8
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BU of 8iy8 by Molmil
Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Feruloyl esterase
Authors:Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M.
Deposit date:2023-04-04
Release date:2023-10-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii.
Int.J.Biol.Macromol., 253, 2023
7VXT
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BU of 7vxt by Molmil
Crystal structure of a selenomethionine-labeled BPSL1038 from Burkholderia pseudomallei
Descriptor: BETA-MERCAPTOETHANOL, BPSL1038, SODIUM ION
Authors:Shaibullah, S, Mohd-Sharif, M, Ho, K.L, Firdaus-Raih, M, Nathan, S, Mohamed, R, Teh, A.K, Waterman, J, Ng, C.L.
Deposit date:2021-11-13
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural and functional analyses of Burkholderia pseudomallei BPSL1038 reveal a Cas-2/VapD nuclease sub-family.
Commun Biol, 6, 2023
5Z9G
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BU of 5z9g by Molmil
Crystal structure of KAI2
Descriptor: Probable esterase KAI2
Authors:Kim, K.L, Cha, J.S, Soh, M.S, Cho, H.S.
Deposit date:2018-02-03
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A missense allele of KARRIKIN-INSENSITIVE2 impairs ligand-binding and downstream signaling in Arabidopsis thaliana.
J. Exp. Bot., 69, 2018
8J3S
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Complex structure of human cytomegalovirus protease and a macrocyclic peptide ligand
Descriptor: Assemblin, PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY
Authors:Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
Deposit date:2023-04-18
Release date:2023-11-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
8JE4
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BU of 8je4 by Molmil
Crystal structure of LimF prenyltransferase (H239G/W273T mutant) bound with the thiodiphosphate moiety of farnesyl S-thiolodiphosphate (FSPP)
Descriptor: MAGNESIUM ION, TRIHYDROGEN THIODIPHOSPHATE, prenyltransferase, ...
Authors:Hamada, K, Oguni, A, Zhang, Y, Satake, M, Goto, Y, Suga, H, Ogata, K, Sengoku, T.
Deposit date:2023-05-15
Release date:2023-11-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Switching Prenyl Donor Specificities of Cyanobactin Prenyltransferases.
J.Am.Chem.Soc., 145, 2023
8IN4
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BU of 8in4 by Molmil
Eisenia hydrolysis-enhancing protein from Aplysia kurodai
Descriptor: 25 kDa polyphenol-binding protein, ACETYL GROUP, GLYCEROL
Authors:Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M.
Deposit date:2023-03-08
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity.
Elife, 12, 2023
8J3T
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BU of 8j3t by Molmil
Complex structure of human cytomegalovirus protease and a non-covalent small-molecule ligand
Descriptor: (4R)-1-[1-[(S)-[1-cyclopentyl-3-(2-methylphenyl)pyrazol-4-yl]-(4-methylphenyl)methyl]-2-oxidanylidene-pyridin-3-yl]-3-methyl-2-oxidanylidene-N-(3-oxidanylidene-2-azabicyclo[2.2.2]octan-4-yl)imidazolidine-4-carboxamide, Assemblin
Authors:Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
Deposit date:2023-04-18
Release date:2023-11-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
8IN1
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BU of 8in1 by Molmil
beta-glucosidase protein from Aplysia kurodai
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-Glucosidase, alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M.
Deposit date:2023-03-08
Release date:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity.
Elife, 12, 2023
8YA8
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BU of 8ya8 by Molmil
The crystal structure of human Rtel1 HHD2 domain
Descriptor: Regulator of telomere elongation helicase 1
Authors:Chun, I.S, Kim, M.S.
Deposit date:2024-02-08
Release date:2024-02-28
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the HHD2 domain in human RTEL1
Biodesign, 12, 2024
8IN3
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BU of 8in3 by Molmil
Eisenia hydrolysis-enhancing protein from Aplysia kurodai
Descriptor: 25 kDa polyphenol-binding protein, GLYCEROL
Authors:Sun, X.M, Ye, Y.X, Kato, K, Yu, J, Yao, M.
Deposit date:2023-03-08
Release date:2023-11-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect aku BGL activity.
Elife, 12, 2023

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數據於2024-11-06公開中

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