Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51938 results

5QUT
DownloadVisualize
BU of 5qut by Molmil
HumRadA1 soaked with 10 mM indazole in 10% DMSO
Descriptor: 1H-indazole, PHOSPHATE ION, RadA
Authors:Marsh, M, Hyvonen, M.
Deposit date:2020-01-27
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.248 Å)
Cite:Optimisation of crystal forms for structure-guided drug discovery
To be published
5QUS
DownloadVisualize
BU of 5qus by Molmil
HumRadA1 soaked with 5 mM indazole in 10% DMSO
Descriptor: 1H-indazole, DIMETHYL SULFOXIDE, PHOSPHATE ION, ...
Authors:Marsh, M, Hyvonen, M.
Deposit date:2020-01-27
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.247 Å)
Cite:Optimisation of crystal forms for structure-guided drug discovery
To be published
3SQF
DownloadVisualize
BU of 3sqf by Molmil
Crystal structure of monomeric M-PMV retroviral protease
Descriptor: Protease
Authors:Jaskolski, M, Kazmierczyk, M, Gilski, M, Krzywda, S, Pichova, I, Zabranska, H, Khatib, F, DiMaio, F, Cooper, S, Thompson, J, Popovic, Z, Baker, D, Group, Foldit Contenders
Deposit date:2011-07-05
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6324 Å)
Cite:Crystal structure of a monomeric retroviral protease solved by protein folding game players.
Nat.Struct.Mol.Biol., 18, 2011
5QUU
DownloadVisualize
BU of 5quu by Molmil
HumRadA1 as soaking control with 10% DMSO
Descriptor: DIMETHYL SULFOXIDE, PHOSPHATE ION, RadA
Authors:Marsh, M, Hyvonen, M.
Deposit date:2020-01-27
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.248 Å)
Cite:Optimisation of crystal forms for structure-guided drug discovery
To be published
5QUR
DownloadVisualize
BU of 5qur by Molmil
HumRadA1 soaked with 2 mM indazole in 10% DMSO
Descriptor: 1H-indazole, PHOSPHATE ION, RadA
Authors:Marsh, M, Hyvonen, M.
Deposit date:2020-01-27
Release date:2021-03-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.247 Å)
Cite:Optimisation of crystal forms for structure-guided drug discovery
To be published
6FMR
DownloadVisualize
BU of 6fmr by Molmil
IMISX-EP of Se-PepTSt
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Di-or tripeptide:H+ symporter, PHOSPHATE ION
Authors:Huang, C.-Y, Olieric, V, Howe, N, Warshamanage, R, Weinert, T, Panepucci, E, Vogeley, L, Basu, S, Diederichs, K, Caffrey, M, Wang, M.
Deposit date:2018-02-02
Release date:2018-08-29
Last modified:2018-10-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:In situ serial crystallography for rapid de novo membrane protein structure determination.
Commun Biol, 1, 2018
6FMW
DownloadVisualize
BU of 6fmw by Molmil
IMISX-EP of Hg-BacA cocrystallization
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MERCURY (II) ION, ...
Authors:Huang, C.-Y, Olieric, V, Howe, N, Warshamanage, R, Weinert, T, Panepucci, E, Vogeley, L, Basu, S, Diederichs, K, Caffrey, M, Wang, M.
Deposit date:2018-02-02
Release date:2018-09-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:In situ serial crystallography for rapid de novo membrane protein structure determination.
Commun Biol, 1, 2018
7B9W
DownloadVisualize
BU of 7b9w by Molmil
Crystal structure of MurE from E.coli in complex with Z757284380
Descriptor: 1,2-ETHANEDIOL, 3-Chloro-N-[2-(2,4-dioxo-1,3-thiazolidin-3-yl)ethyl]benzamide, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase
Authors:Koekemoer, L, Steindel, M, Fairhead, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Krojer, T, Structural Genomics Consortium (SGC)
Deposit date:2020-12-14
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of MurE from E.coli
To Be Published
3DAY
DownloadVisualize
BU of 3day by Molmil
Crystal structure of human acyl-CoA synthetase medium-chain family member 2A (L64P mutation) in complex with AMP-CPP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor, ...
Authors:Pilka, E.S, Kochan, G.T, Yue, W.W, Bhatia, C, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Wikstrom, M, Bountra, C, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2008-05-30
Release date:2008-07-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural snapshots for the conformation-dependent catalysis by human medium-chain acyl-coenzyme A synthetase ACSM2A.
J.Mol.Biol., 388, 2009
1HL3
DownloadVisualize
BU of 1hl3 by Molmil
CtBP/BARS in ternary complex with NAD(H) and PIDLSKK peptide
Descriptor: C-TERMINAL BINDING PROTEIN 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PRO-ILE-ASP-LEU-SER-LYS-LYS PEPTIDE
Authors:Nardini, M, Spano, S, Cericola, C, Pesce, A, Massaro, A, Millo, E, Luini, A, Corda, D, Bolognesi, M.
Deposit date:2003-03-13
Release date:2003-06-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Ctbp/Bars: A Dual-Function Protein Involved in Transcription Co-Repression and Golgi Membrane Fission
Embo J., 22, 2003
7Q4A
DownloadVisualize
BU of 7q4a by Molmil
Toxoplasma gondii PRP4K kinase domain (L715F) bound to altiratinib
Descriptor: Altiratinib, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Swale, C, Bellini, V, Bowler, M.
Deposit date:2021-10-29
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Altiratinib blocks Toxoplasma gondii and Plasmodium falciparum development by selectively targeting a spliceosome kinase.
Sci Transl Med, 14, 2022
7F1I
DownloadVisualize
BU of 7f1i by Molmil
Designed enzyme RA61 M48K/I72D mutant: form II
Descriptor: Engineered Retroaldolase
Authors:Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
Deposit date:2021-06-09
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022
7ERH
DownloadVisualize
BU of 7erh by Molmil
Crystal structure of WT-TTR in complex with bithionol
Descriptor: 2,2'-sulfanediylbis(4,6-dichlorophenol), CALCIUM ION, Transthyretin
Authors:Yokoyama, T, Kashihara, M, Mizuguchi, M.
Deposit date:2021-05-06
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Repositioning of the Anthelmintic Drugs Bithionol and Triclabendazole as Transthyretin Amyloidogenesis Inhibitors.
J.Med.Chem., 64, 2021
8ERC
DownloadVisualize
BU of 8erc by Molmil
Human Membrane-bound O-acyltransferase 7
Descriptor: Lysophospholipid acyltransferase 7
Authors:Wang, K, Liao, M, Farese, R.V, Walther, T.C.
Deposit date:2022-10-11
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The structure of phosphatidylinositol remodeling MBOAT7 reveals its catalytic mechanism and enables inhibitor identification.
Nat Commun, 14, 2023
7F1H
DownloadVisualize
BU of 7f1h by Molmil
Designed enzyme RA61 M48K/I72D mutant: form I
Descriptor: Engineered Retroaldolase, FORMIC ACID, GLYCEROL
Authors:Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
Deposit date:2021-06-09
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022
7ERJ
DownloadVisualize
BU of 7erj by Molmil
Crystal structure of V30M-TTR in complex with dichlorophen
Descriptor: 4-chloranyl-2-[(5-chloranyl-2-oxidanyl-phenyl)methyl]phenol, CALCIUM ION, Transthyretin
Authors:Yokoyama, T, Kashihara, M, Mizuguchi, M.
Deposit date:2021-05-06
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Repositioning of the Anthelmintic Drugs Bithionol and Triclabendazole as Transthyretin Amyloidogenesis Inhibitors.
J.Med.Chem., 64, 2021
5F31
DownloadVisualize
BU of 5f31 by Molmil
Crystal structure of membrane associated PatA from Mycobacterium smegmatis in complex with palmitate - P 42 21 2 space group
Descriptor: ETHANOL, PALMITIC ACID, Phosphatidylinositol mannoside acyltransferase, ...
Authors:Albesa-Jove, D, Svetlikova, Z, Carreras-Gonzalez, A, Tersa, M, Sancho-Vaello, E, Cifuente, J.O, Mikusova, K, Guerin, M.E.
Deposit date:2015-12-02
Release date:2016-03-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural basis for selective recognition of acyl chains by the membrane-associated acyltransferase PatA.
Nat Commun, 7, 2016
7F1J
DownloadVisualize
BU of 7f1j by Molmil
Designed enzyme RA61 M48K/I72D mutant: form III
Descriptor: Engineered Retroaldolase
Authors:Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
Deposit date:2021-06-09
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022
3LMM
DownloadVisualize
BU of 3lmm by Molmil
Crystal Structure of the DIP2311 protein from Corynebacterium diphtheriae, Northeast Structural Genomics Consortium Target CdR35
Descriptor: CHLORIDE ION, COBALT (II) ION, Uncharacterized protein
Authors:Forouhar, F, Lew, S, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Buchwald, W.A, Maglaqui, M, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-31
Release date:2010-02-16
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Northeast Structural Genomics Consortium Target CdR35
To be Published
7ERK
DownloadVisualize
BU of 7erk by Molmil
Crystal structure of V30M-TTR in complex with dasatinib
Descriptor: N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, Transthyretin
Authors:Yokoyama, T, Kashihara, M, Mizuguchi, M.
Deposit date:2021-05-06
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Repositioning of the Anthelmintic Drugs Bithionol and Triclabendazole as Transthyretin Amyloidogenesis Inhibitors.
J.Med.Chem., 64, 2021
7ERI
DownloadVisualize
BU of 7eri by Molmil
Crystal structure of V30M-TTR in complex with triclabendazole
Descriptor: 6-[2,3-bis(chloranyl)phenoxy]-5-chloranyl-2-methylsulfanyl-1H-benzimidazole, Transthyretin
Authors:Yokoyama, T, Kashihara, M, Mizuguchi, M.
Deposit date:2021-05-06
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.813 Å)
Cite:Repositioning of the Anthelmintic Drugs Bithionol and Triclabendazole as Transthyretin Amyloidogenesis Inhibitors.
J.Med.Chem., 64, 2021
8OLD
DownloadVisualize
BU of 8old by Molmil
Crystal structure of Archaeoglobus fulgidus AfAgo-N protein representing N-L1-L2 domains
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Archaeoglobus fulgidus AfAgo-N protein representing N-L1-L2 domains, CACODYLATE ION, ...
Authors:Manakova, E.N, Zaremba, M, Grazulis, S.
Deposit date:2023-03-30
Release date:2024-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The missing part: the Archaeoglobus fulgidus Argonaute forms a functional heterodimer with an N-L1-L2 domain protein.
Nucleic Acids Res., 52, 2024
7F1K
DownloadVisualize
BU of 7f1k by Molmil
Designed enzyme RA61 M48K/I72D mutant: form IV
Descriptor: Engineered Retroaldolase
Authors:Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
Deposit date:2021-06-09
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022
2SPZ
DownloadVisualize
BU of 2spz by Molmil
STAPHYLOCOCCAL PROTEIN A, Z-DOMAIN, NMR, 10 STRUCTURES
Descriptor: IMMUNOGLOBULIN G BINDING PROTEIN A
Authors:Montelione, G.T, Tashiro, M, Tejero, R, Lyons, B.A.
Deposit date:1998-07-29
Release date:1998-08-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High-resolution solution NMR structure of the Z domain of staphylococcal protein A.
J.Mol.Biol., 272, 1997
7F1L
DownloadVisualize
BU of 7f1l by Molmil
Designed enzyme RA61 M48K/I72D mutant: form V
Descriptor: CHLORIDE ION, Engineered Retroaldolase, IMIDAZOLE
Authors:Fujioka, T, Oka, M, Numoto, N, Ito, N, Oda, M, Tanaka, F.
Deposit date:2021-06-09
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Varying the Directionality of Protein Catalysts for Aldol and Retro-Aldol Reactions.
Chembiochem, 23, 2022

225681

数据于2024-10-02公开中

PDB statisticsPDBj update infoContact PDBjnumon