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PDB: 51938 results

7CRK
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BU of 7crk by Molmil
2ps Structure of Chloride ion pumping rhodopsin (ClR) with NTQ motif
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Yun, J.H, Liu, H, Lee, W.T, Schmidt, M.
Deposit date:2020-08-13
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Early-stage dynamics of chloride ion-pumping rhodopsin revealed by a femtosecond X-ray laser.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CRX
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BU of 7crx by Molmil
Structure of Chloride ion pumping rhodopsin (ClR) with NTQ motif 100 ps after light activation (2.63mJ/mm2)
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Yun, J.H, Liu, H, Lee, W.T, Schmidt, M.
Deposit date:2020-08-14
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Early-stage dynamics of chloride ion-pumping rhodopsin revealed by a femtosecond X-ray laser.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CRT
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BU of 7crt by Molmil
Structure of Chloride ion pumping rhodopsin (ClR) with NTQ motif 100 ps after light activation (0.17mJ/mm2)
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Yun, J.H, Liu, H, Lee, W.T, Schmidt, M.
Deposit date:2020-08-14
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Early-stage dynamics of chloride ion-pumping rhodopsin revealed by a femtosecond X-ray laser.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CRS
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BU of 7crs by Molmil
Structure of Chloride ion pumping rhodopsin (ClR) with NTQ motif 100 ps after light activation (0.90mJ/mm2)
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Yun, J.H, Liu, H, Lee, W.T, Schmidt, M.
Deposit date:2020-08-14
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Early-stage dynamics of chloride ion-pumping rhodopsin revealed by a femtosecond X-ray laser.
Proc.Natl.Acad.Sci.USA, 118, 2021
7C5W
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BU of 7c5w by Molmil
Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with iodide
Descriptor: IODIDE ION, iota-carbonic anhydrase
Authors:Senda, M, Senda, T.
Deposit date:2020-05-20
Release date:2021-04-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
5IWS
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BU of 5iws by Molmil
Crystal structure of the transporter MalT, the EIIC domain from the maltose-specific phosphotransferase system
Descriptor: Protein-N(Pi)-phosphohistidine-sugar phosphotransferase (Enzyme II of the phosphotransferase system) (PTS system glucose-specific IIBC component), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:McCoy, J.G, Ren, Z, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2016-03-22
Release date:2016-05-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:The Structure of a Sugar Transporter of the Glucose EIIC Superfamily Provides Insight into the Elevator Mechanism of Membrane Transport.
Structure, 24, 2016
7C5Y
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BU of 7c5y by Molmil
Crystal structure of the iota-carbonic anhydrase from eukaryotic microalga complexed with iodide
Descriptor: IODIDE ION, iota-carbonic anhydrase
Authors:Senda, M, Senda, T.
Deposit date:2020-05-20
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
5IXO
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BU of 5ixo by Molmil
Crystal structure of the Arabidopsis receptor kinase HAESA LRR ectdomain (apo form).
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Santiago, J, Hothorn, M.
Deposit date:2016-03-23
Release date:2016-04-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife, 5, 2016
7JRI
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BU of 7jri by Molmil
High-resolution Crystal Structures of Transient Intermediates in the Phytochrome Photocycle, 33 ms structure
Descriptor: 3-[2-[[5-[[(3E,4S)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP
Authors:Schmidt, M, Stojkovic, E.
Deposit date:2020-08-12
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-resolution crystal structures of transient intermediates in the phytochrome photocycle.
Structure, 29, 2021
7C5X
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BU of 7c5x by Molmil
Crystal structure of the iota-carbonic anhydrase from eukaryotic microalga complexed with bicarbonate
Descriptor: BICARBONATE ION, iota-carbonic anhydrase
Authors:Senda, M, Senda, T.
Deposit date:2020-05-20
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
7C5V
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BU of 7c5v by Molmil
Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with bicarbonate
Descriptor: BICARBONATE ION, iota-carbonic anhydrase
Authors:Senda, M, Senda, T.
Deposit date:2020-05-20
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
2VPE
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BU of 2vpe by Molmil
Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex
Descriptor: B-CELL CLL/LYMPHOMA 9 PROTEIN, GLYCEROL, HISTONE H3 TAIL, ...
Authors:Fiedler, M, Sanchez-Barrena, M.J, Nekrasov, M, Mieszczanek, J, Rybin, V, Muller, J, Evans, P, Bienz, M.
Deposit date:2008-02-27
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex.
Mol.Cell, 30, 2008
5WBN
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BU of 5wbn by Molmil
Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Descriptor: 3-(3-benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Harding, R.J, Walker, J.R, Ferreira de Freitas, R, Ravichandran, M, Santhakumar, V, Schapira, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H.
Deposit date:2017-06-29
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
To be published
5J80
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BU of 5j80 by Molmil
Crystal Structure of Apo Hsp90-alpha N-domain L107A mutant
Descriptor: Heat shock protein HSP 90-alpha
Authors:Amaral, M, Matias, P.
Deposit date:2016-04-07
Release date:2017-12-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Protein conformational flexibility modulates kinetics and thermodynamics of drug binding.
Nat Commun, 8, 2017
2VPG
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BU of 2vpg by Molmil
Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex
Descriptor: B-CELL CLL/LYMPHOMA 9 PROTEIN, GLYCEROL, HISTONE H3 TAIL, ...
Authors:Fiedler, M, Sanchez-Barrena, M.J, Nekrasov, M, Mieszczanek, J, Rybin, V, Muller, J, Bienz, M, Evans, P.
Deposit date:2008-02-27
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex.
Mol.Cell, 30, 2008
5J8T
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BU of 5j8t by Molmil
NMR structure of Excalibur domain of CbpL
Descriptor: CALCIUM ION, Choline binding protein
Authors:Pantoja-Uceda, D, Trevino, M.A, Bruix, M.
Deposit date:2016-04-08
Release date:2017-05-10
Last modified:2019-10-23
Method:SOLUTION NMR
Cite:Molecular Choline-bindind Protein L Involved in Pneumococcal Adhesion and Virulence through Exposed Excalibur domanin
To Be Published
5WJE
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BU of 5wje by Molmil
Crystal structure of Naa80 bound to a bisubstrate analogue
Descriptor: Actin N-terminus peptide, CARBOXYMETHYL COENZYME *A, CG8481, ...
Authors:Goris, M, Magin, R.S, Marmorstein, R, Arnesen, T.
Deposit date:2017-07-21
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:Structural determinants and cellular environment define processed actin as the sole substrate of the N-terminal acetyltransferase NAA80.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5J9B
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BU of 5j9b by Molmil
Crystal structure of peroxiredoxin Asp f3
Descriptor: peroxiredoxin Asp f3
Authors:Bzymek, K.P, Williams, J.C, Hong, T.B, Bagramyan, K, Kalkum, M.
Deposit date:2016-04-08
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of Peroxiredoxin Asp f3 Provides Mechanistic Insight into Oxidative Stress Resistance and Virulence of Aspergillus fumigatus.
Sci Rep, 6, 2016
2VO1
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BU of 2vo1 by Molmil
CRYSTAL STRUCTURE OF THE SYNTHETASE DOMAIN OF HUMAN CTP SYNTHETASE
Descriptor: CTP SYNTHASE 1, SULFATE ION
Authors:Stenmark, P, Kursula, P, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Kotenyoa, T, Moche, M, Nilsson-Ehle, P, Ogg, D, Persson, C, Sagemark, J, Schuler, H, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Nordlund, P.
Deposit date:2008-02-08
Release date:2008-03-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Synthetase Domain of Human Ctp Synthetase, a Target for Anticancer Therapy.
Acta Crystallogr.,Sect.F, 62, 2006
4KNB
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BU of 4knb by Molmil
C-Met in complex with OSI ligand
Descriptor: 7-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-3-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]furo[3,2-c]pyridin-6-amine, GAMMA-BUTYROLACTONE, Hepatocyte growth factor receptor
Authors:Wang, J, Steinig, A.G, Li, A.H, Chen, X, Dong, H, Ferraro, C, Jin, M, Kadalbajoo, M, Kleinberg, A, Stolz, K.M, Tavares-Greco, P.A, Wang, T, Albertella, M.R, Peng, Y, Crew, L, Kahler, J.
Deposit date:2013-05-09
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Novel 6-aminofuro[3,2-c]pyridines as potent, orally efficacious inhibitors of cMET and RON kinases.
Bioorg.Med.Chem.Lett., 23, 2013
2VPI
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BU of 2vpi by Molmil
Human GMP synthetase - glutaminase domain
Descriptor: GMP SYNTHASE
Authors:Welin, M, Tresaugues, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Herman, M.D, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Van Der Berg, S, Weigelt, J, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2008-02-29
Release date:2008-03-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human Gmp Synthetase - Glutaminase Domain
To be Published
5X9L
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BU of 5x9l by Molmil
Recombinant thaumatin I at 0.9 Angstrom
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
Authors:Masuda, T, Okubo, K, Sugahara, M, Suzuki, M, Mikami, B.
Deposit date:2017-03-08
Release date:2018-03-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Subatomic structure of hyper-sweet thaumatin D21N mutant reveals the importance of flexible conformations for enhanced sweetness.
Biochimie, 157, 2019
2D3Q
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BU of 2d3q by Molmil
Crystal Structure of a Decolorizing Peroxidase (DyP) That Catalyses the Biological Oxidation of Anthraquinone Derivatives
Descriptor: Decolorizing Peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sato, T, Sugano, Y, Shoda, M.
Deposit date:2005-09-30
Release date:2006-09-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The catalytic mechanism of dye-decolorizing peroxidase DyP may require the swinging movement of an aspartic acid residue
Febs J., 278, 2011
5XOF
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BU of 5xof by Molmil
Crystal structure of human paired immunoglobulin-like type 2 receptor alpha with synthesized glycopeptide I
Descriptor: N-acetyl-alpha-neuraminic acid-(2-6)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Paired immunoglobulin-like type 2 receptor alpha, Peptide from Nitric oxide synthase, ...
Authors:Furukawa, A, Kakita, K, Yamada, T, Ishizuka, M, Sakamoto, J, Hatori, N, Maeda, N, Ohsaka, F, Saitoh, T, Nomura, T, Kuroki, K, Nambu, H, Arase, H, Matsunaga, H, Anada, M, Ose, T, Hashimoto, S, Maenaka, K.
Deposit date:2017-05-28
Release date:2017-10-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.963 Å)
Cite:Structural and thermodynamic analyses reveal critical features of glycopeptide recognition by the human PILR alpha immune cell receptor.
J. Biol. Chem., 292, 2017
2Q9M
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BU of 2q9m by Molmil
4-Substituted Trinems as Broad Spectrum-Lactamase Inhibitors: Structure-based Design, Synthesis and Biological Activity
Descriptor: (1R,4S,7AS)-1-(1-FORMYLPROP-1-EN-1-YL)-4-METHOXY-2,4,5,6,7,7A-HEXAHYDRO-1H-ISOINDOLE-3-CARBOXYLIC ACID, Beta-lactamase
Authors:Plantan, I, Selic, L, Mesar, T, Stefanic Anderluh, P, Oblak, M, Prezelj, A, Hesse, L, Andrejasic, M, Vilar, M, Turk, D, Kocijan, A, Prevec, T, Vilfan, G, Kocjan, D, Copar, A, Urleb, U, Solmajer, T.
Deposit date:2007-06-13
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:4-Substituted Trinems as Broad Spectrum beta-Lactamase Inhibitors: Structure-Based Design, Synthesis, and Biological Activity
J.Med.Chem., 50, 2007

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