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PDB: 52259 results

3P5P
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Crystal Structure of Taxadiene Synthase from Pacific Yew (Taxus brevifolia) in complex with Mg2+ and 13-aza-13,14-dihydrocopalyl diphosphate
Descriptor: 1,2-ETHANEDIOL, 2-(methyl{2-[(1S,4aS,8aS)-5,5,8a-trimethyl-2-methylidenedecahydronaphthalen-1-yl]ethyl}amino)ethyl trihydrogen diphosphate, MAGNESIUM ION, ...
Authors:Koksal, M, Christianson, D.W.
Deposit date:2010-10-10
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.816 Å)
Cite:Taxadiene synthase structure and evolution of modular architecture in terpene biosynthesis.
Nature, 469, 2011
4H5F
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Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 1
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ARGININE, ...
Authors:Stogios, P.J, Wawrzak, Z, Kudritska, M, Minasov, G, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-09-18
Release date:2012-10-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an amino acid ABC transporter substrate-binding protein from Streptococcus pneumoniae Canada MDR_19A bound to L-arginine, form 1
TO BE PUBLISHED
2VUT
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Crystal structure of NAD-bound NmrA-AreA zinc finger complex
Descriptor: CHLORIDE ION, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Kotaka, M, Johnson, C, Lamb, H.K, Hawkins, A.R, Ren, J, Stammers, D.K.
Deposit date:2008-05-30
Release date:2008-07-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Analysis of the Recognition of the Negative Regulator Nmra and DNA by the Zinc Finger from the Gata-Type Transcription Factor Area.
J.Mol.Biol., 381, 2008
1XTY
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Crystal structure of Sulfolobus solfataricus peptidyl-tRNA hydrolase
Descriptor: Peptidyl-tRNA hydrolase, SULFATE ION
Authors:Fromant, M, Schmitt, E, Mechulam, Y, Lazennec, C, Plateau, P, Blanquet, S.
Deposit date:2004-10-25
Release date:2005-03-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure at 1.8 A resolution and identification of active site residues of Sulfolobus solfataricus peptidyl-tRNA hydrolase.
Biochemistry, 44, 2005
1XU7
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Crystal Structure of the Interface Open Conformation of Tetrameric 11b-HSD1
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Corticosteroid 11-beta-dehydrogenase, isozyme 1, ...
Authors:Hosfield, D.J, Wu, Y, Skene, R.J, Hilger, M, Jennings, A, Snell, G.P, Aertgeerts, K.
Deposit date:2004-10-25
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational Flexibility in Crystal Structures of Human 11beta-hydroxysteroid dehydrogenase type I provide insights into glucocorticoid interconversion and enzyme regulation.
J.Biol.Chem., 280, 2005
3P8G
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BU of 3p8g by Molmil
Crystal Structure of MT-SP1 in complex with benzamidine
Descriptor: 1,2-ETHANEDIOL, BENZAMIDINE, GLUTATHIONE, ...
Authors:Yuan, C, Huang, M, Chen, L.
Deposit date:2010-10-13
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of catalytic domain of Matriptase in complex with Sunflower trypsin inhibitor-1.
Bmc Struct.Biol., 11, 2011
2W4B
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BU of 2w4b by Molmil
Epstein-Barr virus alkaline nuclease D203S mutant
Descriptor: ALKALINE EXONUCLEASE
Authors:Buisson, M, Geoui, T, Flot, D, Tarbouriech, N, Burmeister, W.P.
Deposit date:2008-11-24
Release date:2009-06-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A Bridge Crosses the Active Site Canyon of the Epstein-Barr Virus Nuclease with DNase and Rnase Activity.
J.Mol.Biol., 391, 2009
4J98
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BU of 4j98 by Molmil
Crystal Structure of FGF Receptor 2 (FGFR2) Kinase Domain Harboring the Gain-of-Function K659Q Mutation.
Descriptor: Fibroblast growth factor receptor 2, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, SULFATE ION
Authors:Huang, Z, Chen, H, Mohammadi, M.
Deposit date:2013-02-15
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3067 Å)
Cite:Cracking the Molecular Origin of Intrinsic Tyrosine Kinase Activity through Analysis of Pathogenic Gain-of-Function Mutations.
Cell Rep, 4, 2013
4J9Y
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Calcium-calmodulin complexed with the calmodulin binding domain from a small conductance potassium channel splice variant
Descriptor: CALCIUM ION, Calmodulin, GLYCEROL, ...
Authors:Zhang, M, Pascal, J.M, Zhang, J.-F.
Deposit date:2013-02-17
Release date:2013-03-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Unstructured to structured transition of an intrinsically disordered protein peptide in coupling Ca2+-sensing and SK channel activation.
Proc.Natl.Acad.Sci.USA, 110, 2013
2WBJ
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TCR complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN, ...
Authors:Harkiolaki, M, Holmes, S.L, Svendsen, P, Gregersen, J.W, Jensen, L.T, McMahon, R, Friese, M.A, van Boxel, G, Etzensperger, R, Tzartos, J.S, Kranc, K, Sainsbury, S, Harlos, K, Mellins, E.D, Palace, J, Esiri, M.M, van der Merwe, P.A, Jones, E.Y, Fugger, L.
Deposit date:2009-03-02
Release date:2009-04-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:T Cell-Mediated Autoimmune Disease due to Low-Affinity Crossreactivity to Common Microbial Peptides.
Immunity, 30, 2009
1XUZ
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Crystal structure analysis of sialic acid synthase (NeuB)from Neisseria meningitidis, bound to Mn2+, Phosphoenolpyruvate, and N-acetyl mannosaminitol
Descriptor: 5-DEOXY-5-{[(1S)-1-HYDROXYETHYL]AMINO}-D-GLUCITOL, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
Authors:Gunawan, J, Simard, D, Gilbert, M, Lovering, A.L, Wakarchuk, W.W, Tanner, M.E, Strynadka, N.C.
Deposit date:2004-10-26
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and mechanistic analysis of sialic acid synthase NeuB from Neisseria meningitidis in complex with Mn2+, phosphoenolpyruvate, and N-acetylmannosaminitol.
J.Biol.Chem., 280, 2005
3P98
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The crystal structure of the extended spectrum beta-lactamase TEM-72 reveals inhibition by citrate
Descriptor: Beta-lactamase TEM-72, CITRIC ACID, DI(HYDROXYETHYL)ETHER
Authors:Docquier, J.D, Benvenuti, M, Calderone, V, Rossolini, G.M, Mangani, S.
Deposit date:2010-10-16
Release date:2011-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the extended-spectrum [beta]-lactamase TEM-72 inhibited by citrate
Acta Crystallogr.,Sect.F, 67, 2011
2W2E
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BU of 2w2e by Molmil
1.15 Angstrom crystal structure of P.pastoris aquaporin, Aqy1, in a closed conformation at pH 3.5
Descriptor: AQUAPORIN PIP2-7 7, CHLORIDE ION, octyl beta-D-glucopyranoside
Authors:Fischer, G, Kosinska-Eriksson, U, Aponte-Santamaria, C, Palmgren, M, Geijer, C, Hedfalk, K, Hohmann, S, de Groot, B.L, Neutze, R, Lindkvist-Petersson, K.
Deposit date:2008-10-29
Release date:2009-06-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of a Yeast Aquaporin at 1.15 A Reveals a Novel Gating Mechanism.1.15 A
Plos Biol., 7, 2009
5DAF
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BU of 5daf by Molmil
Crystal Structure of Human KEAP1 BTB Domain in Complex with Small Molecule TX64063
Descriptor: (5aS,6S,9aS)-7-hydroxy-2,6,9a-trimethyl-3-(pyridin-3-yl)-4,5,5a,6,9,9a-hexahydro-2H-benzo[g]indazole-8-carbonitrile, Kelch-like ECH-associated protein 1
Authors:Huerta, C, Jiang, X, Trevino, I, Bender, C.F, Swinger, K.K, Stoll, V.S, Ferguson, D.A, Thomas, P.J, Probst, B, Dulubova, I, Visnick, M, Wigley, W.C.
Deposit date:2015-08-19
Release date:2016-08-10
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Characterization of novel small-molecule NRF2 activators: Structural and biochemical validation of stereospecific KEAP1 binding.
Biochim.Biophys.Acta, 1860, 2016
1XWH
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BU of 1xwh by Molmil
NMR structure of the first phd finger of autoimmune regulator protein (AIRE1): insights into apeced
Descriptor: Autoimmune regulator, ZINC ION
Authors:Bottomley, M.J, Stier, G, Krasotkina, J, Legube, G, Simon, B, Akhtar, A, Sattler, M, Musco, G.
Deposit date:2004-11-01
Release date:2005-01-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of the first PHD finger of autoimmune regulator protein (AIRE1). Insights into autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED) disease
J.Biol.Chem., 280, 2005
3N3D
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BU of 3n3d by Molmil
Crystal structure of geranylgeranyl pyrophosphate synthase from lactobacillus brevis atcc 367
Descriptor: Geranylgeranyl pyrophosphate synthase, SULFATE ION
Authors:Patskovsky, Y, Toro, R, Rutter, M, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-19
Release date:2010-06-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Geranylgeranyl Pyrophosphate Synthase from Lactobacillus Brevis
To be Published
3N3X
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Crystal Structure of the complex formed between type I ribosome inactivating protein and hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 1.7 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GUANINE, Ribosome inactivating protein, ...
Authors:Kushwaha, G.S, Vikram, G, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-05-20
Release date:2010-06-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the complex formed between type I ribosome inactivating protein and hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 1.7 A resolution
To be Published
3NN1
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Structure of chlorite dismutase from Candidatus Nitrospira defluvii in complex with imidazole
Descriptor: 1,2-ETHANEDIOL, Chlorite dismutase, IMIDAZOLE, ...
Authors:Kostan, J, Sjoeblom, B, Maixner, F, Mlynek, G, Furtmueller, P.G, Obinger, C, Wagner, M, Daims, H, Djinovic-Carugo, K.
Deposit date:2010-06-23
Release date:2010-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and functional characterisation of the chlorite dismutase from the nitrite-oxidizing bacterium "Candidatus Nitrospira defluvii": Identification of a catalytically important amino acid residue
J.Struct.Biol., 172, 2010
4JMS
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BU of 4jms by Molmil
Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with imidazo[1,2-a]pyridin-5-amine
Descriptor: Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE, imidazo[1,2-a]pyridin-5-amine
Authors:Barelier, S, Fischer, M.
Deposit date:2013-03-14
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Docking to a water-filled model binding site in Cytochrome c Peroxidase
To be published
1YXB
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BU of 1yxb by Molmil
Crystal structure of Phosphoribosyl-ATP pyrophosphatase from Streptomyces coelicolor. NESG target RR8.
Descriptor: Phosphoribosyl-ATP pyrophosphatase
Authors:Benach, J, Kuzin, A.P, Forouhar, F, Abashidze, M, Vorobiev, S.M, Rong, X, Acton, T.B, Montelione, G.T, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-02-20
Release date:2005-03-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Phosphoribosyl-ATP pyrophosphatase from Streptomyces coelicolor. NESG target RR8.
To be Published
1YXK
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BU of 1yxk by Molmil
Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) disulfide-linked dimer
Descriptor: oxidised low density lipoprotein (lectin-like) receptor 1
Authors:Ohki, I, Ishigaki, T, Oyama, T, Matsunaga, S, Xie, Q, Ohnishi-Kameyama, M, Murata, T, Tsuchiya, D, Machida, S, Morikawa, K, Tate, S.
Deposit date:2005-02-22
Release date:2005-06-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL.
Structure, 13, 2005
3N4V
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apo APH(2")-IVa form III
Descriptor: APH(2'')-Id
Authors:Smith, C.A, Toth, M, Frase, H, Vakulenko, S.B.
Deposit date:2010-05-22
Release date:2010-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure and kinetic mechanism of aminoglycoside phosphotransferase-2''-IVa.
Protein Sci., 19, 2010
3N90
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The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen.
Descriptor: SULFATE ION, Thylakoid lumenal 15 kDa protein 1, chloroplastic
Authors:Ni, S, Mckgookey, M, Tinch, S.L, Jones, A.N, Jayaraman, S, Kennedy, M.A.
Deposit date:2010-05-28
Release date:2011-06-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen.
To be Published
2WBE
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BU of 2wbe by Molmil
Kinesin-5-Tubulin Complex with AMPPNP
Descriptor: BIPOLAR KINESIN KRP-130, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Bodey, A.J, Kikkawa, M, Moores, C.A.
Deposit date:2009-02-26
Release date:2009-03-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.4 Å)
Cite:9-Angstrom Structure of a Microtubule-Bound Mitotic Motor.
J.Mol.Biol., 388, 2009
4J62
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Crystal structure of Ribonuclease A soaked in 40% Cyclohexanol: One of twelve in MSCS set
Descriptor: CYCLOHEXANOL, Ribonuclease pancreatic, SULFATE ION
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published

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