Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51964 results

6H2G
DownloadVisualize
BU of 6h2g by Molmil
Structure of BlaC from Mycobacterium tuberculosis bound to the propionaldehyde ester adduct of clavulanic acid.
Descriptor: 3-oxidanylidenepropanoic acid, ACETATE ION, Beta-lactamase
Authors:Tassoni, R, Pannu, N.S, Ubbink, M.
Deposit date:2018-07-13
Release date:2019-01-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:New Conformations of Acylation Adducts of Inhibitors of beta-Lactamase from Mycobacterium tuberculosis.
Biochemistry, 58, 2019
6FAM
DownloadVisualize
BU of 6fam by Molmil
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-2-aminodeoxymannojirimycin
Descriptor: ACETATE ION, Glycosyl hydrolase family 71, alpha-D-mannopyranose, ...
Authors:Fernandes, P.Z, Petricevic, M, Sobala, L.F, Davies, G.J, Williams, S.J.
Deposit date:2017-12-15
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Exploration of Strategies for Mechanism-Based Inhibitor Design for Family GH99 endo-alpha-1,2-Mannanases.
Chemistry, 24, 2018
1HJP
DownloadVisualize
BU of 1hjp by Molmil
HOLLIDAY JUNCTION BINDING PROTEIN RUVA FROM E. COLI
Descriptor: RUVA
Authors:Nishino, T, Ariyoshi, M, Iwasaki, H, Shinagawa, H, Morikawa, K.
Deposit date:1997-08-21
Release date:1998-02-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Functional Analyses of the Domain Structure in the Holliday Junction Binding Protein Ruva
Structure, 6, 1998
3DPU
DownloadVisualize
BU of 3dpu by Molmil
RocCOR domain tandem of Rab family protein (Roco)
Descriptor: Rab family protein
Authors:Gotthardt, K, Weyand, M, Kortholt, A, Van Haastert, P.J.M, Wittinghofer, A.
Deposit date:2008-07-09
Release date:2008-08-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J., 27, 2008
6H2U
DownloadVisualize
BU of 6h2u by Molmil
Crystal structure of human METTL5-TRMT112 complex, the 18S rRNA m6A1832 methyltransferase at 1.6A resolution
Descriptor: 1,2-ETHANEDIOL, Methyltransferase-like protein 5, Multifunctional methyltransferase subunit TRM112-like protein, ...
Authors:van Tran, N, Graille, M.
Deposit date:2018-07-16
Release date:2019-07-31
Last modified:2019-09-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The human 18S rRNA m6A methyltransferase METTL5 is stabilized by TRMT112.
Nucleic Acids Res., 47, 2019
3DQV
DownloadVisualize
BU of 3dqv by Molmil
Structural Insights into NEDD8 Activation of Cullin-RING Ligases: Conformational Control of Conjugation
Descriptor: Cullin-5, NEDD8, Rbx1, ...
Authors:Duda, D.M, Borg, L.A, Scott, D.C, Hunt, H.W, Hammel, M, Schulman, B.A.
Deposit date:2008-07-09
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into NEDD8 activation of cullin-RING ligases: conformational control of conjugation.
Cell(Cambridge,Mass.), 134, 2008
4NBZ
DownloadVisualize
BU of 4nbz by Molmil
Crystal Structure of TcdA-A1 Bound to A26.8 VHH
Descriptor: A26.8 VHH, TcdA
Authors:Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E.N, Klassen, J.S, Ng, K.K.S.
Deposit date:2013-10-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
4NC9
DownloadVisualize
BU of 4nc9 by Molmil
Crystal structure of phosphatidyl mannosyltransferase PimA
Descriptor: GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase
Authors:Giganti, D, Albesa-Jove, D, Bellinzoni, M, Guerin, M.E, Alzari, P.M.
Deposit date:2013-10-24
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.192 Å)
Cite:Secondary structure reshuffling modulates glycosyltransferase function at the membrane.
Nat.Chem.Biol., 11, 2015
1HM4
DownloadVisualize
BU of 1hm4 by Molmil
N219L PENTALENENE SYNTHASE
Descriptor: PENTALENENE SYNTHASE
Authors:Seemann, M, Paschall, C.M, Christianson, D.W, Cane, D.E.
Deposit date:2000-12-04
Release date:2002-08-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:Pentalenene synthase. Analysis of active site residues by site-directed mutagenesis.
J.Am.Chem.Soc., 124, 2002
4NCY
DownloadVisualize
BU of 4ncy by Molmil
In situ trypsin crystallized on a MiTeGen micromesh with imidazole ligand
Descriptor: 1,2-ETHANEDIOL, BENZAMIDINE, CALCIUM ION, ...
Authors:Yin, X, Scalia, A, Leroy, L, Cuttitta, C.M, Polizzo, G.M, Ericson, D.L, Roessler, C.G, Campos, O, Agarwal, R, Allaire, M, Orville, A.M, Jackimowicz, R, Ma, M.Y, Sweet, R.M, Soares, A.S.
Deposit date:2013-10-25
Release date:2014-04-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Hitting the target: fragment screening with acoustic in situ co-crystallization of proteins plus fragment libraries on pin-mounted data-collection micromeshes.
Acta Crystallogr.,Sect.D, 70, 2014
3Q1H
DownloadVisualize
BU of 3q1h by Molmil
Crystal Structure of Dihydrofolate Reductase from Yersinia pestis
Descriptor: Dihydrofolate reductase, SULFATE ION
Authors:Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-12-17
Release date:2011-01-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:Crystal Structure of Dihydrofolate Reductase from Yersinia pestis
To be Published
6H3U
DownloadVisualize
BU of 6h3u by Molmil
Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 4B6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hellert, J, Aebischer, A, Wernike, K, Haouz, A, Brocchi, E, Reiche, S, Guardado-Calvo, P, Beer, M, Rey, F.A.
Deposit date:2018-07-19
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.168 Å)
Cite:Orthobunyavirus spike architecture and recognition by neutralizing antibodies.
Nat Commun, 10, 2019
6GUD
DownloadVisualize
BU of 6gud by Molmil
Siderophore hydrolase EstB from Aspergillus fumigatus
Descriptor: CARBONATE ION, GLYCEROL, SULFATE ION, ...
Authors:Ecker, F, Haas, H, Groll, M, Huber, E.M.
Deposit date:2018-06-19
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Iron Scavenging in Aspergillus Species: Structural and Biochemical Insights into Fungal Siderophore Esterases.
Angew. Chem. Int. Ed. Engl., 57, 2018
6GUN
DownloadVisualize
BU of 6gun by Molmil
Siderophore hydrolase EstB from Aspergillus nidulans
Descriptor: EstB from Aspergillus nidulans, GLYCEROL
Authors:Ecker, F, Haas, H, Groll, M, Huber, E.M.
Deposit date:2018-06-19
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Iron Scavenging in Aspergillus Species: Structural and Biochemical Insights into Fungal Siderophore Esterases.
Angew. Chem. Int. Ed. Engl., 57, 2018
3Q4Y
DownloadVisualize
BU of 3q4y by Molmil
Crystal structure of group I phospholipase A2 at 2.3 A resolution in 40% ethanol revealed the critical elements of hydrophobicity of the substrate-binding site
Descriptor: CALCIUM ION, ETHANOL, Phospholipase A2 isoform 3
Authors:Shukla, P.K, Kaushik, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-12-26
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of group I phospholipase A2 at 2.3 A resolution in 40% ethanol revealed the critical elements of hydrophobicity of the substrate-binding site
To be Published
4NE7
DownloadVisualize
BU of 4ne7 by Molmil
Crystal Structure of engineered Kumamolisin-As from Alicyclobacillus sendaiensis, Northeast Structural Genomics Consortium (NESG) Target OR367
Descriptor: Kumamolisin-As, ZINC ION
Authors:Guan, R, Pultz, I.S, Siegel, J.B, Seetharaman, J, Kornhaber, G, Maglaqui, M, Mao, L, Xiao, R, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-10-28
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Northeast Structural Genomics Consortium Target OR367
To be Published
3DOI
DownloadVisualize
BU of 3doi by Molmil
Crystal Structure of a Thermostable Esterase complex with paraoxon
Descriptor: DIETHYL PHOSPHONATE, esterase
Authors:Levisson, M, Sun, L, Hendriks, S, Dijkstra, B.W, Van der Oost, J, Kengen, S.W.M.
Deposit date:2008-07-04
Release date:2009-02-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure and biochemical properties of a novel thermostable esterase containing an immunoglobulin-like domain.
J.Mol.Biol., 385, 2009
2C30
DownloadVisualize
BU of 2c30 by Molmil
Crystal Structure Of The Human P21-Activated Kinase 6
Descriptor: CHLORIDE ION, PHOSPHATE ION, SERINE/THREONINE-PROTEIN KINASE PAK 6
Authors:Filippakopoulos, P, Berridge, G, Bray, J, Burgess, N, Colebrook, S, Das, S, Eswaran, J, Gileadi, O, Papagrigoriou, E, Savitsky, P, Smee, C, Turnbull, A, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, von Delft, F, Knapp, S.
Deposit date:2005-10-02
Release date:2006-02-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of the P21-Activated Kinases Pak4, Pak5, and Pak6 Reveal Catalytic Domain Plasticity of Active Group II Paks.
Structure, 15, 2007
6FDL
DownloadVisualize
BU of 6fdl by Molmil
Crystal structure of the NYN domain of human MARF1
Descriptor: Meiosis regulator and mRNA stability factor 1
Authors:Jinek, M, Brandmann, T.
Deposit date:2017-12-26
Release date:2018-11-07
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Human MARF1 is an endoribonuclease that interacts with the DCP1:2 decapping complex and degrades target mRNAs.
Nucleic Acids Res., 46, 2018
6GWE
DownloadVisualize
BU of 6gwe by Molmil
Crystal structure of Thrombin bound to P2 macrocycle
Descriptor: (10S,14S,17R)-14-(3-carbamimidamidopropyl)-3-[[2-(hydroxymethyl)phenyl]methyl]-5,12,15-tris(oxidanylidene)-19-thia-3,6,13,16-tetrazatricyclo[19.4.0.0^{6,10}]pentacosa-1(21),22,24-triene-17-carboxamide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cendron, L, Angelini, A, Kale, S.S, Bergeron-Brlek, M, Wu, Y, Heinis, C.
Deposit date:2018-06-23
Release date:2019-09-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Thiol-to-amine cyclization reaction enables screening of large libraries of macrocyclic compounds and the generation of sub-kilodalton ligands.
Sci Adv, 5, 2019
4YDZ
DownloadVisualize
BU of 4ydz by Molmil
Stress-induced protein 1 from Caenorhabditis elegans
Descriptor: Stress-induced protein 1
Authors:Fleckenstein, T, Kastenmueller, A, Stein, M.L, Peters, C, Daake, M, Krause, M, Weinfurtner, D, Haslbeck, M, Weinkauf, S, Groll, M, Buchner, J.
Deposit date:2015-02-23
Release date:2015-06-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Chaperone Activity of the Developmental Small Heat Shock Protein Sip1 Is Regulated by pH-Dependent Conformational Changes.
Mol.Cell, 58, 2015
4NNN
DownloadVisualize
BU of 4nnn by Molmil
yCP in complex with MG132
Descriptor: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide, Probable proteasome subunit alpha type-7, ...
Authors:Stein, M.L, Cui, H, Beck, P, Dubiella, C, Voss, C, Krueger, A, Schmidt, B, Groll, M.
Deposit date:2013-11-18
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Systematic Comparison of Peptidic Proteasome Inhibitors Highlights the alpha-Ketoamide Electrophile as an Auspicious Reversible Lead Motif.
Angew.Chem.Int.Ed.Engl., 53, 2014
3DPT
DownloadVisualize
BU of 3dpt by Molmil
COR domain of Rab family protein (Roco)
Descriptor: Rab family protein
Authors:Gotthardt, K, Weyand, M, Kortholt, A, Van Haastert, P.J.M, Wittinghofer, A.
Deposit date:2008-07-09
Release date:2008-08-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J., 27, 2008
6GYE
DownloadVisualize
BU of 6gye by Molmil
Crystal structure of NadR protein in complex with NR
Descriptor: Nicotinamide riboside, Nicotinamide-nucleotide adenylyltransferase NadR family / Ribosylnicotinamide kinase, SULFATE ION
Authors:Singh, R, Stetsenko, A, Jaehme, M, Guskov, A, Slotboom, D.J.
Deposit date:2018-06-29
Release date:2019-07-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Functional Characterization of NadR fromLactococcus lactis.
Molecules, 25, 2020
4NP6
DownloadVisualize
BU of 4np6 by Molmil
Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor
Descriptor: Adenylate kinase
Authors:Kim, Y, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-11-20
Release date:2013-12-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor
To be Published

225946

건을2024-10-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon