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PDB: 51689 results

5F9N
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BU of 5f9n by Molmil
CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING dCMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N2-ETHENODEOXYGUANOSINE LESION
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(GNE)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Patra, A, Egli, M.
Deposit date:2015-12-09
Release date:2016-12-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Bypass of the 1, N2-Ethenodeoxyguanosine Lesion by Human DNA Polymerase Eta
To Be Published
5ULE
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BU of 5ule by Molmil
Structure and function of the divalent anion/Na+ symporter from Vibrio cholerae and a humanized variant
Descriptor: SODIUM ION, SUCCINIC ACID, Transporter, ...
Authors:Lu, M.
Deposit date:2017-01-24
Release date:2017-05-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of the divalent anion/Na(+) symporter from Vibrio cholerae and a humanized variant.
Nat Commun, 8, 2017
7Q08
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BU of 7q08 by Molmil
Structure of Candida albicans 80S ribosome in complex with cycloheximide
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-14
Release date:2022-05-25
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
5K2M
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BU of 5k2m by Molmil
Bifunctional LysX/ArgX from Thermococcus kodakarensis with LysW-gamma-AAA
Descriptor: 2-AMINOHEXANEDIOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Yoshida, A, Tomita, T, Nishiyama, M.
Deposit date:2016-05-19
Release date:2016-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Lysine Biosynthesis of Thermococcus kodakarensis with the Capacity to Function as an Ornithine Biosynthetic System.
J. Biol. Chem., 291, 2016
7ZJK
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BU of 7zjk by Molmil
CspZ (BbCRASP-2) from Borrelia burgdorferi strain B408
Descriptor: CspZ
Authors:Brangulis, K, Marcinkiewicz, A, Hart, T.M, Dupuis, A.P, Zamba Campero, M, Nowak, T.A, Stout, J.L, Akopjana, I, Kazaks, A, Bogans, J, Ciota, A.T, Kraiczy, P, Kolokotronis, S.O, Lin, Y.-P.
Deposit date:2022-04-11
Release date:2023-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural evolution of an immune evasion determinant shapes pathogen host tropism.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D46
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BU of 8d46 by Molmil
Cryo-electron microscopy structure of human kidney Aldehyde Dehydrogenase 1A1
Descriptor: Retinal dehydrogenase 1
Authors:Lyu, M, Yu, E.W.
Deposit date:2022-06-01
Release date:2022-11-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Cryo-electron microscopy structure of human kidney Aldehyde Dehydrogenase 1A1
To Be Published
5FAS
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BU of 5fas by Molmil
OXA-48 in complex with FPI-1523
Descriptor: Beta-lactamase, CADMIUM ION, CHLORIDE ION, ...
Authors:King, A.M, King, D.T, French, S, Brouillette, E, Asli, A, Alexander, A.N, Vuckovic, M, Maiti, S.N, Parr, T.R, Brown, E.D, Malouin, F, Strynadka, N.C.J, Wright, G.D.
Deposit date:2015-12-11
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural and Kinetic Characterization of Diazabicyclooctanes as Dual Inhibitors of Both Serine-beta-Lactamases and Penicillin-Binding Proteins.
Acs Chem.Biol., 11, 2016
5FKT
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BU of 5fkt by Molmil
Unraveling the first step of xyloglucan degradation by the soil saprophyte Cellvibrio japonicus through the functional and structural characterization of a potent GH74 endo-xyloglucanase
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, ENDO-1,4-BETA-GLUCANASE/XYLOGLUCANASE, ...
Authors:Attia, M, Stepper, J, Davies, G.J, Brumer, H.
Deposit date:2015-10-19
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Functional and Structural Characterization of a Potent Gh74 Endo-Xyloglucanase from the Soil Saprophyte Cellvibrio Japonicus Unravels the First Step of Xyloglucan Degradation.
FEBS J., 283, 2016
7Q34
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BU of 7q34 by Molmil
Crystal structure of the multidrug binding transcriptional regulator LmrR in complex squaraine dye
Descriptor: 2,4-bis[(E)-(1-ethyl-3,3-dimethyl-indol-2-ylidene)methyl]cyclobutane-1,3-dione, Helix-turn-helix transcriptional regulator, NICKEL (II) ION
Authors:Liutkus, M, Mejias, S.H, Barolo, C, Cortajarena, A.L.
Deposit date:2021-10-26
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Designing Artificial Fluorescent Proteins: Squaraine-LmrR Biophosphors for High Performance Deep-Red Biohybrid Light-Emitting Diodes
Adv Funct Mater, 32, 2022
5T89
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BU of 5t89 by Molmil
Crystal structure of VEGF-A in complex with VEGFR-1 domains D1-6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Vascular endothelial growth factor A, ...
Authors:Markovic-Mueller, S, Stuttfeld, E, Asthana, M, Weinert, T, Bliven, S, Goldie, K.N, Kisko, K, Capitani, G, Ballmer-Hofer, K.
Deposit date:2016-09-07
Release date:2017-02-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of the Full-length VEGFR-1 Extracellular Domain in Complex with VEGF-A.
Structure, 25, 2017
1K19
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BU of 1k19 by Molmil
NMR Solution Structure of the Chemosensory Protein CSP2 from Moth Mamestra brassicae
Descriptor: Chemosensory Protein CSP2
Authors:Mosbah, A, Campanacci, V, Lartigue, A, Tegoni, M, Cambillau, C, Darbon, H.
Deposit date:2001-09-24
Release date:2002-12-04
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of a chemosensory protein from the moth Mamestra brassicae
BIOCHEM.J., 369, 2003
5TAI
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BU of 5tai by Molmil
Conformational Sampling Differences across the Arrhenius Plot Biphasic Break Point at Ambient Temperature in the Enzyme Thermolysin
Descriptor: CALCIUM ION, LYSINE, Thermolysin, ...
Authors:Dong, M, Bahnson, B.J.
Deposit date:2016-09-10
Release date:2017-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Conformational Sampling Differences across the Arrhenius Plot Biphasic Break Point at Ambient Temperature in the Enzyme Thermolysin
To Be Published
5FCI
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BU of 5fci by Molmil
Structure of the vacant uL3 W255C mutant 80S yeast ribosome
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Mailliot, J, Garreau de Loubresse, N, Yusupova, G, Dinman, J.D, Yusupov, M.
Deposit date:2015-12-15
Release date:2016-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structures of the uL3 Mutant Ribosome: Illustration of the Importance of Ribosomal Proteins for Translation Efficiency.
J.Mol.Biol., 428, 2016
5FYG
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BU of 5fyg by Molmil
Structure of CYP153A from Marinobacter aquaeolei in complex with hydroxydodecanoic acid
Descriptor: 12-HYDROXYDODECANOIC ACID, CYTOCHROME P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Danesh-Azari, H.-R, Spandolf, C, Hoffman, S.M, Weissenborn, M, Hauer, B, Grogan, G.
Deposit date:2016-03-07
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure-Guided Redesign of CYP153AM.aqfor the Improved Terminal Hydroxylation of Fatty Acids
Chemcatchem, 2016
1CD0
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BU of 1cd0 by Molmil
STRUCTURE OF HUMAN LAMDA-6 LIGHT CHAIN DIMER JTO
Descriptor: PROTEIN (JTO, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-05
Release date:2000-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
5TBF
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BU of 5tbf by Molmil
Crystal structure of SeMet derivatives of domain2 and domain 3 of RctB
Descriptor: Translation elongation factor
Authors:Li, M, Wlodawer, A, Chattoraj, D, Jha, J.
Deposit date:2016-09-12
Release date:2017-04-12
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Crystal Structure of core domains of RctB
To Be Published
5FNP
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BU of 5fnp by Molmil
High resolution Zn containing Iron sulfur cluster repair protein YtfE
Descriptor: CHLORIDE ION, IRON-SULFUR CLUSTER REPAIR PROTEIN YTFE, OXYGEN ATOM, ...
Authors:Lo, F.-C, Hsieh, C.-C, Maestre-Reyna, M, Chen, C.-Y, Ko, T.-P, Horng, Y.-C, Lai, Y.-C, Chiang, Y.-W, Chou, C.-M, Chiang, C.-H, Huang, W.-N, Liaw, W.-F.
Deposit date:2015-11-16
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Repair of Iron Centers Protein Ytfe and its Interaction with No
Chemistry, 22, 2016
5FTJ
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BU of 5ftj by Molmil
Cryo-EM structure of human p97 bound to UPCDC30245 inhibitor
Descriptor: 1-(3-(5-FLUORO-1H-INDOL-2-YL)PHENYL)PIPERIDIN-4-YL)(2-(4-ISOPROPYL-PIPERAZIN1-YL)ETHYL)-CARBAMATE, ADENOSINE-5'-DIPHOSPHATE, TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE
Authors:Banerjee, S, Bartesaghi, A, Merk, A, Rao, P, Bulfer, S.L, Yan, Y, Green, N, Mroczkowski, B, Neitz, R.J, Wipf, P, Falconieri, V, Deshaies, R.J, Milne, J.L.S, Huryn, D, Arkin, M, Subramaniam, S.
Deposit date:2016-01-14
Release date:2016-01-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:2.3 A Resolution Cryo-Em Structure of Human P97 and Mechanism of Allosteric Inhibition
Science, 351, 2016
5FV5
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BU of 5fv5 by Molmil
KpFlo11 presents a novel member of the Flo11 family with a unique recognition pattern for homophilic interactions
Descriptor: ACETATE ION, Flocculation protein FLO11
Authors:Kraushaar, T, Brueckner, S, Mikolaiski, M, Schreiner, F, Veelders, M, Moesch, H.U, Essen, L.O.
Deposit date:2016-02-03
Release date:2017-02-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Kin discrimination in social yeast is mediated by cell surface receptors of the Flo11 adhesin family.
Elife, 9, 2020
7QV8
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BU of 7qv8 by Molmil
Leishmania infantum BRC1 repeat in complex with LiRAD51
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA repair protein RAD51 homolog, DNA_repair_protein_BRCA2_-_putative, ...
Authors:Pantelejevs, T, Hyvonen, M.
Deposit date:2022-01-20
Release date:2022-03-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Divergent binding mode for a protozoan BRC repeat to RAD51.
Biochem.J., 479, 2022
5JPD
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BU of 5jpd by Molmil
Metal ABC transporter from Listeria monocytogenes with cadmium
Descriptor: CADMIUM ION, CHLORIDE ION, Manganese-binding lipoprotein MntA
Authors:Osipiuk, J, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-05-03
Release date:2016-05-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Metal ABC transporter from Listeria monocytogenes with cadmium
to be published
1C76
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BU of 1c76 by Molmil
STAPHYLOKINASE (SAK) MONOMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Staphylokinase Dimer Offers New Clue to Reduction of Immunogenicity
To be published
5TBV
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BU of 5tbv by Molmil
Crystal Structure of Isoform 2 of Purine Nucleoside Phosphorylase complexed with tubercidin
Descriptor: '2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, DIMETHYL SULFOXIDE, Purine nucleoside phosphorylase, ...
Authors:Faheem, M, Torini, J.R, Romanello, L, Brandao-Neto, J, Pereira, H.M.
Deposit date:2016-09-13
Release date:2017-10-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Isoform 2 of Purine Nucleoside Phosphorylase
To Be Published
5JUW
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BU of 5juw by Molmil
complex of Dot1l with SS148
Descriptor: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-5-cyano-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Histone-lysine N-methyltransferase, H3 lysine-79 specific, ...
Authors:Yu, W, Tempel, W, Li, Y, Spurr, S.S, Bayle, E.D, Fish, P.V, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2016-05-10
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Complex of Dot1l with SS148
To Be Published
1C9H
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BU of 1c9h by Molmil
CRYSTAL STRUCTURE OF FKBP12.6 IN COMPLEX WITH RAPAMYCIN
Descriptor: FKBP12.6, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
Authors:Deivanayagam, C.C.S, Carson, M, Thotakura, A, Narayana, S.V.L, Chodavarapu, C.S.
Deposit date:1999-08-02
Release date:2000-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of FKBP12.6 in complex with rapamycin.
Acta Crystallogr.,Sect.D, 56, 2000

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