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PDB: 51689 results

1YW0
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BU of 1yw0 by Molmil
Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.
Descriptor: MAGNESIUM ION, tryptophan 2,3-dioxygenase
Authors:Vorobiev, S.M, Abashidze, M, Forouhar, F, Kuzin, A, Xiao, R, Ciano, M, Aton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-02-16
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.
To be Published
7UWI
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BU of 7uwi by Molmil
Structure of beta-catenin in complex with FP01567, a Helicon Polypeptide
Descriptor: Catenin beta-1, GLYCEROL, Helicon Polypeptide FP01567, ...
Authors:Brennan, M, Agarwal, S, Thomson, T, Wahl, S, Ramirez, J, Verdine, G, McGee, J.
Deposit date:2022-05-03
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries.
Proc.Natl.Acad.Sci.USA, 119, 2022
2POR
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BU of 2por by Molmil
STRUCTURE OF PORIN REFINED AT 1.8 ANGSTROMS RESOLUTION
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, PORIN
Authors:Weiss, M.S, Schulz, G.E.
Deposit date:1992-04-24
Release date:1993-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of porin refined at 1.8 A resolution.
J.Mol.Biol., 227, 1992
1BAY
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BU of 1bay by Molmil
GLUTATHIONE S-TRANSFERASE YFYF CYS 47-CARBOXYMETHYLATED CLASS PI, FREE ENZYME
Descriptor: GLUTATHIONE S-TRANSFERASE CLASS PI
Authors:Vega, M.C, Coll, M.
Deposit date:1996-11-02
Release date:1997-11-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:The three-dimensional structure of Cys-47-modified mouse liver glutathione S-transferase P1-1. Carboxymethylation dramatically decreases the affinity for glutathione and is associated with a loss of electron density in the alphaB-310B region.
J.Biol.Chem., 273, 1998
7UT5
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BU of 7ut5 by Molmil
Acinetobacter baumannii dihydroorotate dehydrogenase bound with inhibitor DSM186
Descriptor: (4R)-7-methyl-N-[4-(pentafluoro-lambda~6~-sulfanyl)phenyl]imidazo[1,2-a]pyrimidin-5-amine, Dihydroorotate dehydrogenase (quinone), FLAVIN MONONUCLEOTIDE, ...
Authors:Deng, X, Phillips, M, Tomchick, D.
Deposit date:2022-04-26
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Repurposed dihydroorotate dehydrogenase inhibitors with efficacy against drug-resistant Acinetobacter baumannii.
Proc.Natl.Acad.Sci.USA, 119, 2022
1BGA
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BU of 1bga by Molmil
BETA-GLUCOSIDASE A FROM BACILLUS POLYMYXA
Descriptor: BETA-GLUCOSIDASE A
Authors:Sanz-Aparicio, J, Hermoso, J.A, Martinez-Ripoll, M, Polaina, J.
Deposit date:1997-04-04
Release date:1998-04-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of beta-glucosidase A from Bacillus polymyxa: insights into the catalytic activity in family 1 glycosyl hydrolases.
J.Mol.Biol., 275, 1998
3N6Q
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BU of 3n6q by Molmil
Crystal structure of YghZ from E. coli
Descriptor: MAGNESIUM ION, YghZ aldo-keto reductase
Authors:Zubieta, C, Totir, M, Echols, N, May, A, Alber, T.
Deposit date:2010-05-26
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Macro-to-Micro Structural Proteomics: Native Source Proteins for High-Throughput Crystallization.
Plos One, 7, 2012
5D0S
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BU of 5d0s by Molmil
Yeast 20S proteasome beta5-D166N mutant in complex with Carfilzomib
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-08-03
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome.
Nat Commun, 7, 2016
4NCC
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BU of 4ncc by Molmil
Neutralizing antibody to murine norovirus
Descriptor: Fab fragment heavy, Fab fragment light
Authors:Smith, T, Li, M.
Deposit date:2013-10-24
Release date:2014-02-19
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Flexibility in surface-exposed loops in a virus capsid mediates escape from antibody neutralization.
J.Virol., 88, 2014
1SN7
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BU of 1sn7 by Molmil
KUMAMOLISIN-AS, APOENZYME
Descriptor: CALCIUM ION, kumamolisin-As
Authors:Wlodawer, A, Li, M, Gustchina, A, Oda, K, Nishino, T.
Deposit date:2004-03-10
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and biochemical investigations of kumamolisin-as, a serine-carboxyl peptidase with collagenase activity.
J.Biol.Chem., 279, 2004
1ZY6
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BU of 1zy6 by Molmil
Membrane-bound dimer structure of Protegrin-1 (PG-1), a beta-Hairpin Antimicrobial Peptide in Lipid Bilayers from Rotational-Echo Double-Resonance Solid-State NMR
Descriptor: Protegrin 1
Authors:Wu, X, Mani, R, Tang, M, Buffy, J.J, Waring, A.J, Sherman, M.A, Hong, M.
Deposit date:2005-06-09
Release date:2006-06-13
Last modified:2022-03-02
Method:SOLID-STATE NMR
Cite:Membrane-Bound Dimer Structure of a beta-Hairpin Antimicrobial Peptide from Rotational-Echo Double-Resonance Solid-State NMR.
Biochemistry, 45, 2006
3NK4
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BU of 3nk4 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.0 A resolution
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CITRATE ANION, Zona pellucida 3
Authors:Monne, M, Jovine, L.
Deposit date:2010-06-18
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010
1SQQ
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BU of 1sqq by Molmil
Crystal Structure Analysis of Bovine Bc1 with Methoxy Acrylate Stilbene (MOAS)
Descriptor: Cytochrome b, Cytochrome c1, heme protein, ...
Authors:Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D.
Deposit date:2004-03-19
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex.
J.Mol.Biol., 341, 2004
1SCZ
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BU of 1scz by Molmil
Improved structural model for the catalytic domain of E.coli dihydrolipoamide succinyltransferase
Descriptor: Dihydrolipoamide Succinyltransferase
Authors:Schormann, N, Symersky, J, Carson, M, Luo, M, Tsao, J, Johnson, D, Huang, W.-Y, Pruett, P, Lin, G, Li, S, Qiu, S, Arabashi, A, Bunzel, B, Luo, D, Nagy, L, Gray, R, Luan, C.-H, Zhang, Z, Lu, S, DeLucas, L.
Deposit date:2004-02-12
Release date:2004-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Improved structural model for the catalytic domain of E.coli dihydrolipoamide succinyltransferase
To be Published
5DCV
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BU of 5dcv by Molmil
Crystal structure of PhoRpp38-SL12M complex
Descriptor: 50S ribosomal protein L7Ae, RNA (47-MER)
Authors:Oshima, K, Tanaka, Y, Yao, M.
Deposit date:2015-08-24
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:Structural basis for recognition of a kink-turn motif by an archaeal homologue of human RNase P protein Rpp38
Biochem.Biophys.Res.Commun., 474, 2016
3NBC
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BU of 3nbc by Molmil
Clitocybe nebularis ricin B-like lectin (CNL) in complex with lactose, crystallized at pH 4.4
Descriptor: Ricin B-like lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Renko, M, Pohleven, J, Sabotic, J, Kos, J, Turk, D.
Deposit date:2010-06-03
Release date:2011-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Bivalent carbohydrate binding is required for biological activity of Clitocybe nebularis lectin (CNL), the N,N'-diacetyllactosediamine (GalNAc beta 1-4GlcNAc, LacdiNAc)-specific lectin from basidiomycete C. nebularis
J.Biol.Chem., 287, 2012
4Q7G
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BU of 4q7g by Molmil
1.7 Angstrom Crystal Structure of leukotoxin LukD from Staphylococcus aureus.
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Leucotoxin LukDv
Authors:Minasov, G, Nocadello, S, Shuvalova, L, Shatsman, S, Kwon, K, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-04-24
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of the components of the Staphylococcus aureus leukotoxin ED.
Acta Crystallogr D Struct Biol, 72, 2016
6J26
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BU of 6j26 by Molmil
Crystal structure of the branched-chain polyamine synthase from Thermococcus kodakarensis (Tk-BpsA) in complex with N4-bis(aminopropyl)spermidine and 5'-methylthioadenosine
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, FE (III) ION, N(4)-bis(aminopropyl)spermidine synthase, ...
Authors:Mizohata, E, Toyoda, M, Fujita, J, Inoue, T.
Deposit date:2018-12-31
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:The C-terminal flexible region of branched-chain polyamine synthase facilitates substrate specificity and catalysis.
Febs J., 286, 2019
2OZL
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BU of 2ozl by Molmil
Human pyruvate dehydrogenase S264E variant
Descriptor: MAGNESIUM ION, POTASSIUM ION, Pyruvate dehydrogenase E1 component alpha subunit, ...
Authors:Ciszak, E.M, Dominiak, P.M, Patel, M.S, Korotchkina, L.G.
Deposit date:2007-02-26
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Phosphorylation of Serine 264 Impedes Active Site Accessibility in the E1 Component of the Human Pyruvate Dehydrogenase Multienzyme Complex
Biochemistry, 46, 2007
1D17
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BU of 1d17 by Molmil
DNA-NOGALAMYCIN INTERACTIONS
Descriptor: DNA (5'-D(*(5CM)P*GP*TP*AP*(5CM)P*G)-3'), NOGALAMYCIN
Authors:Egli, M, Williams, L.D, Frederick, C.A, Rich, A.
Deposit date:1990-08-08
Release date:1991-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA-nogalamycin interactions.
Biochemistry, 30, 1991
6J65
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BU of 6j65 by Molmil
Crystal structure of human HINT1 mutant complexing with AP4A II
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Histidine triad nucleotide-binding protein 1
Authors:Wang, J, Fang, P, Guo, M.
Deposit date:2019-01-14
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Second messenger Ap4A polymerizes target protein HINT1 to transduce signals in Fc epsilon RI-activated mast cells.
Nat Commun, 10, 2019
3NHJ
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BU of 3nhj by Molmil
X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2
Descriptor: 6,9-dimethyl[1,3]dioxolo[4,5-h]quinolin-8(9H)-one, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Sturdy, M.
Deposit date:2010-06-14
Release date:2012-01-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2
To be Published
2OR1
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BU of 2or1 by Molmil
RECOGNITION OF A DNA OPERATOR BY THE REPRESSOR OF PHAGE 434. A VIEW AT HIGH RESOLUTION
Descriptor: 434 REPRESSOR, DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3')
Authors:Aggarwal, A.K, Rodgers, D.W, Drottar, M, Ptashne, M, Harrison, S.C.
Deposit date:1989-09-05
Release date:1989-09-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Recognition of a DNA operator by the repressor of phage 434: a view at high resolution.
Science, 242, 1988
3NHU
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BU of 3nhu by Molmil
X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2
Descriptor: 6-methyl[1,3]dioxolo[4,5-h]quinolin-8(9H)-one, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Sturdy, M.
Deposit date:2010-06-14
Release date:2012-01-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2
To be Published
1UUE
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BU of 1uue by Molmil
a-SPECTRIN SH3 DOMAIN (V44T, D48G MUTANT)
Descriptor: SPECTRIN ALPHA CHAIN
Authors:Vega, M.C, Fernandez, A, Wilmanns, M, Serrano, L.
Deposit date:2003-12-18
Release date:2004-02-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Solvation in Protein Folding Analysis: Combination of Theoretical and Experimental Approaches
Proc.Natl.Acad.Sci.USA, 101, 2004

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