Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 件

3BOF
DownloadVisualize
BU of 3bof by Molmil
Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+ and Homocysteine
分子名称: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, 5-methyltetrahydrofolate S-homocysteine methyltransferase, POTASSIUM ION, ...
著者Koutmos, M, Smith, J.L, Ludwig, M.L.
登録日2007-12-17
公開日2008-03-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Metal active site elasticity linked to activation of homocysteine in methionine synthases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BZR
DownloadVisualize
BU of 3bzr by Molmil
Crystal structure of EscU C-terminal domain with N262D mutation, Space group P 41 21 2
分子名称: EscU
著者Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
登録日2008-01-18
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.646 Å)
主引用文献Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZY
DownloadVisualize
BU of 3bzy by Molmil
Crystal structure of the mutated Y316D EscU C-terminal domain
分子名称: EscU, SULFATE ION
著者Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
登録日2008-01-18
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BT5
DownloadVisualize
BU of 3bt5 by Molmil
Crystal structure of DUF305 fragment from Deinococcus radiodurans
分子名称: CHLORIDE ION, Uncharacterized protein DUF305
著者Ramagopal, U.A, Patskovsky, Y, Rutter, M, Toro, R, Bain, K, Meyer, A.J, Powell, A, Gheyi, T, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-12-27
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structure of DUF305 fragment from Deinococcus radiodurans.
To be Published
7VF5
DownloadVisualize
BU of 7vf5 by Molmil
Human m6A-METTL associated complex (WTAP, VIRMA, and HAKAI)
分子名称: Pre-mRNA-splicing regulator WTAP, Protein virilizer homolog
著者Su, S, Li, S, Deng, T, Gao, M, Yin, Y, Wu, B, Peng, C, Liu, J, Ma, J, Zhang, K.
登録日2021-09-10
公開日2022-09-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structures of human m6A writer complexes.
Cell Res., 32, 2022
3BTF
DownloadVisualize
BU of 3btf by Molmil
THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA-TRYPSIN AND TEN P1 VARIANTS OF BPTI.
分子名称: CALCIUM ION, PROTEIN (PANCREATIC TRYPSIN INHIBITOR), PROTEIN (TRYPSIN), ...
著者Helland, R, Otlewski, J, Sundheim, O, Dadlez, M, Smalas, A.O.
登録日1999-03-10
公開日2000-03-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structures of the complexes between bovine beta-trypsin and ten P1 variants of BPTI.
J.Mol.Biol., 287, 1999
3BTR
DownloadVisualize
BU of 3btr by Molmil
AR-NLS:Importin-alpha complex
分子名称: Androgen receptor, Importin subunit alpha-2
著者Cutress, M.L, Whitaker, H.C, Mills, I.G, Stewart, M, Neal, D.E.
登録日2007-12-30
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the nuclear import of the human androgen receptor
J.Cell.Sci., 121, 2008
7VF2
DownloadVisualize
BU of 7vf2 by Molmil
Human m6A-METTL associated complex (WTAP, VIRMA, ZC3H13, and HAKAI)
分子名称: Pre-mRNA-splicing regulator WTAP, Protein virilizer homolog, Zinc finger CCCH domain-containing protein 13
著者Su, S, Li, S, Deng, T, Gao, M, Yin, Y, Wu, B, Peng, C, Liu, J, Ma, J, Zhang, K.
登録日2021-09-10
公開日2022-09-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structures of human m6A writer complexes.
Cell Res., 32, 2022
7VN0
DownloadVisualize
BU of 7vn0 by Molmil
CATPO mutant - T188A
分子名称: ALANINE, CALCIUM ION, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, ...
著者Yuzugullu Karakus, Y, Balci Unver, S, Zengin Karatas, M, Goc, G, Pearson, A.R, Yorke, B.
登録日2021-10-10
公開日2022-09-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Investigation of how gate residues in the main channel affect the catalytic activity of Scytalidium thermophilum catalase.
Acta Crystallogr D Struct Biol, 80, 2024
7SLS
DownloadVisualize
BU of 7sls by Molmil
HIV Reverse Transcriptase with compound Pyr02
分子名称: 5-(difluoromethyl)-3-{[1-{[(3S)-5-fluoro-2-methyl-6-oxo-3,6-dihydropyridin-3-yl]methyl}-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl]oxy}-2-methylbenzonitrile, Reverse transcriptase/ribonuclease H
著者Klein, D.J, Zebisch, M, Gu, M.
登録日2021-10-24
公開日2022-11-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.078 Å)
主引用文献Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1.
Sci Transl Med, 15, 2023
5PAO
DownloadVisualize
BU of 5pao by Molmil
Crystal Structure of Factor VIIa in complex with (2S)-2,3-dihydroxy-N-[[3-[5-hydroxy-4-(1H-pyrrolo[3,2-c]pyridin-2-yl)pyrazol-1-yl]phenyl]methyl]propanamide;hydrobromide
分子名称: (2S)-2,3-dihydroxy-N-[[3-[5-hydroxy-4-(1H-pyrrolo[3,2-c]pyridin-2-yl)pyrazol-1-yl]phenyl]methyl]propanamide, CALCIUM ION, CHLORIDE ION, ...
著者Stihle, M, Mayweg, A, Roever, S, Rudolph, M.G.
登録日2016-11-10
公開日2017-06-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of a Factor VIIa complex
To be published
3BW8
DownloadVisualize
BU of 3bw8 by Molmil
Crystal structure of the Clostridium limosum C3 exoenzyme
分子名称: Mono-ADP-ribosyltransferase C3, SULFATE ION
著者Vogelsgesang, M, Stieglitz, B, Herrmann, C, Pautsch, A, Aktories, K.
登録日2008-01-08
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the Clostridium limosum C3 exoenzyme.
Febs Lett., 582, 2008
1UUQ
DownloadVisualize
BU of 1uuq by Molmil
Exo-mannosidase from Cellvibrio mixtus
分子名称: GLYCEROL, MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE, SULFATE ION
著者Dias, M.V.F, Vincent, F, Pell, G, Prates, J.A.M, Centeno, M.S.J, Ferreira, L.M.A, Gilbert, H.J, Davies, G.J, Fontes, C.M.G.A.
登録日2004-01-09
公開日2004-04-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Insights Into the Molecular Determinants of Substrate Specificity in Glycoside Hydrolase Family 5 Revealed by the Crystal Structure and Kinetics of Cellvibrio Mixtus Mannosidase 5A
J.Biol.Chem., 279, 2004
7SLR
DownloadVisualize
BU of 7slr by Molmil
HIV Reverse Transcriptase with compound Pyr01
分子名称: 5-(difluoromethyl)-3-({1-[(5-fluoro-2-oxo-1,2-dihydropyridin-3-yl)methyl]-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl}oxy)-2-methylbenzonitrile, Reverse transcriptase/ribonuclease H
著者Klein, D.J, Zebisch, M, Gu, M.
登録日2021-10-24
公開日2022-11-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.179 Å)
主引用文献Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1.
Sci Transl Med, 15, 2023
3C0D
DownloadVisualize
BU of 3c0d by Molmil
Crystal structure of the putative nitrite reductase NADPH (small subunit) oxidoreductase protein Q87HB1. Northeast Structural Genomics Consortium target VpR162
分子名称: Putative nitrite reductase NADPH (Small subunit) oxidoreductase protein
著者Kuzin, A.P, Abashidze, M, Seetharaman, J, Vorobiev, S.M, Wang, D, Fang, Y, Owens, L, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-01-19
公開日2008-03-04
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the putative nitrite reductase NADPH (small subunit) oxidoreductase protein Q87HB1.
To be Published
7VH9
DownloadVisualize
BU of 7vh9 by Molmil
Solution structure of the chimeric peptide of the first SURP domain of Human SF3A1 and the interacting region of SF1.
分子名称: Splicing factor 3A subunit 1,Splicing factor 1
著者Muto, Y, Kuwasako, K, Takizawa, M, Kobayashi, N, Sakamoto, T.
登録日2021-09-21
公開日2022-09-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for the interaction between the first SURP domain of the SF3A1 subunit in U2 snRNP and the human splicing factor SF1.
Protein Sci., 31, 2022
3C0U
DownloadVisualize
BU of 3c0u by Molmil
Crystal structure of E.coli yaeQ protein
分子名称: CHLORIDE ION, SULFATE ION, Uncharacterized protein yaeQ
著者Chang, C, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-01-21
公開日2008-01-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of E.coli yaeQ protein.
To be Published
5OOS
DownloadVisualize
BU of 5oos by Molmil
Designed Ankyrin Repeat Protein (DARPin) YTRL-2 selected by directed evolution against Lysozyme
分子名称: CHLORIDE ION, DARPin YTRL-2, NONAETHYLENE GLYCOL
著者Hogan, B.J, Fischer, G, Houlihan, G, Edmond, S, Huovinen, T.T.K, Hollfelder, F, Hyvonen, M.
登録日2017-08-08
公開日2018-08-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Designed Ankyrin Repeat Protein (DARPin) YTRL-2 selected by directed evolution against Lysozyme
To be published
6UYK
DownloadVisualize
BU of 6uyk by Molmil
Dark-operative protochlorophyllide oxidoreductase in the nucleotide-free form.
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
著者Bacik, J.P, Imran, S.M.S, Watkins, M.B, Corless, E, Antony, E, Ando, N.
登録日2019-11-13
公開日2020-12-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The flexible N-terminus of BchL autoinhibits activity through interaction with its [4Fe-4S] cluster and released upon ATP binding.
J.Biol.Chem., 296, 2020
3CJJ
DownloadVisualize
BU of 3cjj by Molmil
Crystal structure of human rage ligand-binding domain
分子名称: ACETATE ION, Advanced glycosylation end product-specific receptor, ZINC ION
著者Koch, M, Dattilo, B.M, Schiefner, A, Diez, J, Chazin, W.J, Fritz, G.
登録日2008-03-13
公開日2009-03-24
最終更新日2011-12-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for ligand recognition and activation of RAGE.
Structure, 18, 2010
3CU4
DownloadVisualize
BU of 3cu4 by Molmil
OmcF, Outer membrance cytochrome F from Geobacter sulfurreducens
分子名称: Cytochrome c family protein, PROTOPORPHYRIN IX CONTAINING FE
著者Pokkuluri, P.R, Schiffer, M.
登録日2008-04-15
公開日2008-10-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Outer membrane cytochrome c, OmcF, from Geobacter sulfurreducens: High structural similarity to an algal cytochrome c(6).
Proteins, 74, 2008
5OYE
DownloadVisualize
BU of 5oye by Molmil
GH5 endo-xyloglucanase from Cellvibrio japonicus
分子名称: CHLORIDE ION, Cellulase, putative, ...
著者Attia, M, Nelson, C.E, Offen, W.A, Jain, N, Gardner, J.G, Davies, G.J, Brumer, H.
登録日2017-09-08
公開日2018-02-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献In vitro and in vivo characterization of threeCellvibrio japonicusglycoside hydrolase family 5 members reveals potent xyloglucan backbone-cleaving functions.
Biotechnol Biofuels, 11, 2018
3CZH
DownloadVisualize
BU of 3czh by Molmil
Crystal structure of CYP2R1 in complex with vitamin D2
分子名称: (3S,5Z,7E,22E)-9,10-secoergosta-5,7,10,22-tetraen-3-ol, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Cytochrome P450 2R1, ...
著者Strushkevich, N.V, Tempel, W, Gilep, A.A, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2008-04-29
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of CYP2R1 in complex with vitamin D2.
To be Published
7WB8
DownloadVisualize
BU of 7wb8 by Molmil
Crystal structure of Bovine Pancreatic Trypsin in complex with 5-Methoxytryptamine at Room Temperature
分子名称: 2-(5-methoxy-1H-indol-3-yl)ethanamine, CALCIUM ION, Cationic trypsin, ...
著者Sakai, N, Okumura, H, Yamamoto, M, Kumasaka, T.
登録日2021-12-15
公開日2022-06-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献In situ crystal data-collection and ligand-screening system at SPring-8.
Acta Crystallogr.,Sect.F, 78, 2022
7WB6
DownloadVisualize
BU of 7wb6 by Molmil
Crystal structure of Bovine Pancreatic Trypsin in complex with 4-Bromobenzamidine at Room Temperature
分子名称: 4-bromanylbenzenecarboximidamide, CALCIUM ION, Cationic trypsin, ...
著者Sakai, N, Okumura, H, Yamamoto, M, Kumasaka, T.
登録日2021-12-15
公開日2022-06-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献In situ crystal data-collection and ligand-screening system at SPring-8.
Acta Crystallogr.,Sect.F, 78, 2022

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon