Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 件

7NPQ
DownloadVisualize
BU of 7npq by Molmil
Crystal structure of the human LL37(17-29) I24C mutant antimicrobial peptide
分子名称: Cathelicidin antimicrobial peptide
著者Landau, M, Engelberg, Y.
登録日2021-02-28
公開日2022-02-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Rare by Natural Selection: Disulfide-Bonded Supramolecular Antimicrobial Peptides.
Biomacromolecules, 23, 2022
4OYI
DownloadVisualize
BU of 4oyi by Molmil
Human solAC Complexed with (4-Amino-furazan-3-yl)-phenyl-methanone
分子名称: (4-azanyl-1,2,5-oxadiazol-3-yl)-phenyl-methanone, Adenylate cyclase type 10, GLYCEROL
著者Vinkovic, M.
登録日2014-02-12
公開日2014-04-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of human soluble adenylate cyclase reveals a distinct, highly flexible allosteric bicarbonate binding pocket.
Chemmedchem, 9, 2014
4OYW
DownloadVisualize
BU of 4oyw by Molmil
Crystal Structure of Human Soluble Adenylate Cyclase
分子名称: Adenylate cyclase type 10, CHLORIDE ION, GLYCEROL
著者Vinkovic, M.
登録日2014-02-13
公開日2014-04-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of human soluble adenylate cyclase reveals a distinct, highly flexible allosteric bicarbonate binding pocket.
Chemmedchem, 9, 2014
7NH6
DownloadVisualize
BU of 7nh6 by Molmil
Crystal structure of human carbonic anhydrase II with 3-(3-((1-(2-(hydroxymethyl)-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-3-yl)-1H-1,2,3-triazol-4-yl)methyl)ureido)benzenesulfonamide
分子名称: 3-(3-((1-(2-(hydroxymethyl)-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-3-yl)-1H-1,2,3-triazol-4-yl)methyl)ureido)benzenesulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
著者Angeli, A, Ferraroni, M.
登録日2021-02-10
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Mechanisms of the Antiproliferative and Antitumor Activity of Novel Telomerase-Carbonic Anhydrase Dual-Hybrid Inhibitors.
J.Med.Chem., 64, 2021
5X7R
DownloadVisualize
BU of 5x7r by Molmil
Crystal structure of Paenibacillus sp. 598K alpha-1,6-glucosyltransferase complexed with isomaltohexaose
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Fujimoto, Z, Kishine, N, Suzuki, N, Momma, M, Ichinose, H, Kimura, A, Funane, K.
登録日2017-02-27
公開日2017-07-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Carbohydrate-binding architecture of the multi-modular alpha-1,6-glucosyltransferase from Paenibacillus sp. 598K, which produces alpha-1,6-glucosyl-alpha-glucosaccharides from starch
Biochem. J., 474, 2017
7NH8
DownloadVisualize
BU of 7nh8 by Molmil
Crystal structure of human carbonic anhydrase II with N-((1-(6-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)hexyl)-1H-1,2,3-triazol-4-yl)methyl)-4-sulfamoylbenzamide
分子名称: Carbonic anhydrase 2, N-((1-(6-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)hexyl)-1H-1,2,3-triazol-4-yl)methyl)-4-sulfamoylbenzamide, ZINC ION
著者Angeli, A, Ferraroni, M.
登録日2021-02-10
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.369 Å)
主引用文献Synthesis of Azasugar-Sulfonamide conjugates and their Evaluation as Inhibitors of Carbonic Anhydrases: the Azasugar Approach to Selectivity
Eur.J.Org.Chem., 2021
5XAS
DownloadVisualize
BU of 5xas by Molmil
Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS
分子名称: CITRATE ANION, Citrate-sodium symporter, SODIUM ION, ...
著者Jin, M.S, Kim, J.W, Kim, S, Kim, S, Lee, H, Lee, J.-O.
登録日2017-03-14
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.47 Å)
主引用文献Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS
Sci Rep, 7, 2017
7N97
DownloadVisualize
BU of 7n97 by Molmil
State 2 of TcdB and FZD2 at pH5
分子名称: Frizzled-2, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-17
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structural Basis for Receptor Recognition of the Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7N8X
DownloadVisualize
BU of 7n8x by Molmil
Partial C. difficile TcdB and CSPG4 fragment
分子名称: Chondroitin sulfate proteoglycan 4, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-16
公開日2022-03-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
5XGZ
DownloadVisualize
BU of 5xgz by Molmil
Metagenomic glucose-tolerant glycosidase
分子名称: Beta-glycosidase, GLYCEROL, NICKEL (II) ION, ...
著者Watanabe, M, Matsuzawa, T, Yaoi, K.
登録日2017-04-19
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Improved thermostability of a metagenomic glucose-tolerant beta-glycosidase based on its X-ray crystal structure.
Appl.Microbiol.Biotechnol., 101, 2017
7N9Q
DownloadVisualize
BU of 7n9q by Molmil
State 3 of TcdB and FZD2 at pH5
分子名称: Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7NFZ
DownloadVisualize
BU of 7nfz by Molmil
Crystal structure of haloalkane dehalogenase LinB57 mutant (H272F) from Sphingobium japonicum UT26
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, ...
著者Marek, M.
登録日2021-02-08
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Crystal structure of haloalkane dehalogenase LinB57 mutant (H272F) from Sphingobium japonicum UT26
To Be Published
7N9S
DownloadVisualize
BU of 7n9s by Molmil
TcdB and frizzled-2 CRD complex
分子名称: Frizzled-2, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
4OIT
DownloadVisualize
BU of 4oit by Molmil
Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis
分子名称: LysM domain protein, alpha-D-mannopyranose, beta-D-mannopyranose
著者Patra, D, Mishra, P, Surolia, A, Vijayan, M.
登録日2014-01-20
公開日2014-07-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis.
Glycobiology, 24, 2014
7N9R
DownloadVisualize
BU of 7n9r by Molmil
state 4 of TcdB and FZD2 at pH5
分子名称: Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
3AX8
DownloadVisualize
BU of 3ax8 by Molmil
Crystal structure of the human vitamin D receptor ligand binding domain complexed with 15alpha-methoxy-1alpha,25-dihydroxyvitamin D3
分子名称: (1R,3S,5Z)-5-[(2E)-2-[(1R,3S,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-3-methoxy-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Vitamin D3 receptor
著者Kakuda, S, Takimoto-Kamimura, M.
登録日2011-03-30
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献New C15-substituted active vitamin D3
Org.Lett., 13, 2011
7N9Y
DownloadVisualize
BU of 7n9y by Molmil
Full-length TcdB and CSPG4 (401-560) complex
分子名称: Chondroitin sulfate proteoglycan 4, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-18
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
3AXA
DownloadVisualize
BU of 3axa by Molmil
Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3
分子名称: Afadin, Nectin-3
著者Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H.
登録日2011-03-31
公開日2012-04-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site.
Protein Sci., 24, 2015
4OOP
DownloadVisualize
BU of 4oop by Molmil
Arabidopsis thaliana dUTPase with with magnesium and alpha,beta-imido-dUTP
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, MAGNESIUM ION
著者Inoguchi, N, Bajaj, M, Moriyama, H.
登録日2014-02-03
公開日2015-04-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into the mechanism defining substrate affinity in Arabidopsis thaliana dUTPase: the role of tryptophan 93 in ligand orientation.
BMC Res Notes, 8, 2015
7N95
DownloadVisualize
BU of 7n95 by Molmil
state 1 of TcdB and FZD2 at pH5
分子名称: Frizzled-2, Toxin B
著者Jiang, M, Zhang, J.
登録日2021-06-16
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published
7NL8
DownloadVisualize
BU of 7nl8 by Molmil
Crystal structure of a shortened IpgC variant in complex with 3-methylbenzohydrazide
分子名称: 3-methylbenzohydrazide, CHLORIDE ION, Chaperone protein IpgC, ...
著者Gardonyi, M, Heine, A, Klebe, G.
登録日2021-02-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Crystal structure of a shortened IpgC variant in complex with 3-methylbenzohydrazide
To be published
7NHW
DownloadVisualize
BU of 7nhw by Molmil
Crystal structure of a shortened IpgC variant in complex with chlorzoxazone
分子名称: CHLORIDE ION, CHLORZOXAZONE, Chaperone protein IpgC, ...
著者Gardonyi, M, Heine, A, Klebe, G.
登録日2021-02-11
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal structure of a shortened IpgC variant in complex with chlorzoxazone
To be published
8QAQ
DownloadVisualize
BU of 8qaq by Molmil
Conformations of macrocyclic peptides sampled by exact NOEs: models for cell-permeability. Conformation 1 of omphalotin A in apolar solvents.
分子名称: TRP-MVA-ILE-MVA-MVA-SAR-MVA-IML-SAR-VAL-IML-SAR
著者Ruedisser, S.H, Matabaro, E, Sonderegger, L, Guentert, P, Kuenzler, M, Gossert, A.D.
登録日2023-08-23
公開日2023-12-06
最終更新日2024-01-03
実験手法SOLUTION NMR
主引用文献Conformations of Macrocyclic Peptides Sampled by Nuclear Magnetic Resonance: Models for Cell-Permeability.
J.Am.Chem.Soc., 145, 2023
8QAS
DownloadVisualize
BU of 8qas by Molmil
Conformations of macrocyclic peptides sampled by exact NOEs: models for cell-permeability. NMR structure of Omphalotin A in methanol / water indoleOut conformation.
分子名称: TRP-MVA-ILE-MVA-MVA-SAR-MVA-IML-SAR-VAL-IML-SAR
著者Ruedisser, S.H, Matabaro, E, Sonderegger, L, Guentert, P, Kuenzler, M, Gossert, A.D.
登録日2023-08-23
公開日2023-12-06
最終更新日2024-01-03
実験手法SOLUTION NMR
主引用文献Conformations of Macrocyclic Peptides Sampled by Nuclear Magnetic Resonance: Models for Cell-Permeability.
J.Am.Chem.Soc., 145, 2023
4O8F
DownloadVisualize
BU of 4o8f by Molmil
Crystal Structure of the complex between PPARgamma mutant R357A and rosiglitazone
分子名称: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), Peroxisome proliferator-activated receptor gamma
著者Pochetti, G, Montanari, R, Capelli, D, Chiaraluce, R, Consalvi, V, Lori, C, Loiodice, F, Laghezza, A, Pasquo, A, Cervoni, L, Aschi, M.
登録日2013-12-27
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of the transactivation deficiency of the human PPAR gamma F360L mutant associated with familial partial lipodystrophy.
Acta Crystallogr.,Sect.D, 70, 2014

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon