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PDB: 51630 件

7VJ4
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class II photolyase MmCPDII oxidized to semiquinone TR-SFX studies (1 ms time-point)
分子名称: DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.-C, Nango, E, Ngura Putu, E.P.G, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Hosokawa, Y, Saft, M, Emmerich, H.-J, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Royant, A, Gad, W, Pang, A.H, Chang, C.-W, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
7VJE
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class II photolyase MmCPDII semiquinone to fully reduced TR-SFX studies (300 ns time-point)
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.-C, Nango, E, Ngura Putu, E.P.G, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Hosokawa, Y, Saft, M, Emmerich, H.-J, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Royant, A, Gad, W, Pang, A.H, Chang, C.-W, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
7VJ0
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class II photolyase MmCPDII oxidized to semiquinone TR-SFX studies (1 us time-point)
分子名称: DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.-C, Nango, E, Ngura Putu, E.P.G, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Hosokawa, Y, Saft, M, Emmerich, H.-J, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Royant, A, Gad, W, Pang, A.H, Chang, C.-W, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
7VJA
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class II photolyase MmCPDII semiquinone to fully reduced TR-SFX studies (10 ns time-point)
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.-C, Nango, E, Ngura Putu, E.P.G, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Hosokawa, Y, Saft, M, Emmerich, H.-J, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Royant, A, Gad, W, Pang, A.H, Chang, C.-W, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
7C41
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KRAS G12V and H-REV107 peptide complex
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, HRAS-like suppressor 3, ...
著者Han, C.W, Jeong, M.S, Jang, S.B.
登録日2020-05-14
公開日2021-05-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.276 Å)
主引用文献A H-REV107 Peptide Inhibits Tumor Growth and Interacts Directly with Oncogenic KRAS Mutants.
Cancers (Basel), 12, 2020
5ZYM
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Crystal structure of CERT START domain in complex with compound E25B
分子名称: 2-[4-[4-cyclopentyl-3-[(1~{R},2~{S})-2-pyridin-2-ylcyclopropyl]phenyl]phenyl]sulfonylethanol, GLYCEROL, LIPID-TRANSFER PROTEIN CERT
著者Suzuki, M, Nakao, N, Ueno, M, Sakai, S, Egawa, D, Hanzawa, H, Kawasaki, S, Kumagai, K, Kobayashi, S, Hanada, K.
登録日2018-05-25
公開日2019-02-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Natural ligand-nonmimetic inhibitors of the lipid-transfer protein CERT
Commun Chem, 2019
7C3Z
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The structure of class II tumor suppressor protein H-REV107
分子名称: HRAS-like suppressor 3
著者Han, C.W, Jeong, M.S, Jang, S.B.
登録日2020-05-14
公開日2021-05-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.957 Å)
主引用文献A H-REV107 Peptide Inhibits Tumor Growth and Interacts Directly with Oncogenic KRAS Mutants.
Cancers (Basel), 12, 2020
7C40
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MgGDP bound KRAS G12V
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Han, C.W, Jeong, M.S, Jang, S.B.
登録日2020-05-14
公開日2021-05-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.516 Å)
主引用文献A H-REV107 Peptide Inhibits Tumor Growth and Interacts Directly with Oncogenic KRAS Mutants.
Cancers (Basel), 12, 2020
6AJ5
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Crystal structure of ligand-free type DHODH from Eimeria tenella
分子名称: Dihydroorotate dehydrogenase (quinone), mitochondrial, FLAVIN MONONUCLEOTIDE, ...
著者Shiba, T, Inaoka, D.K, Sato, D, Hartuti, E.D, Amalia, E, Nagahama, M, Yoshioka, Y, Matsubayashi, M, Balogun, E.O, Tsuji, N, Kita, K, Harada, S.
登録日2018-08-27
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural and Biochemical Features of Eimeria tenella Dihydroorotate Dehydrogenase, a Potential Drug Target.
Genes (Basel), 11, 2020
6AH3
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Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
分子名称: MAGNESIUM ION, RNases MRP/P 32.9 kDa subunit, Ribonuclease P RNA, ...
著者Lan, P, Tan, M, Wu, J, Lei, M.
登録日2018-08-16
公開日2018-10-17
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Structural insight into precursor tRNA processing by yeast ribonuclease P.
Science, 362, 2018
6A8O
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Crystal structures of the serine protease domain of murine plasma kallikrein with peptide inhibitor mupain-1-16
分子名称: Plasma kallikrein, alpha-D-mannopyranose, peptide inhibitor,, ...
著者Xu, M, Jiang, L, Huang, M.
登録日2018-07-09
公開日2019-07-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Crystal structure of plasma kallikrein reveals the unusual flexibility of the S1 pocket triggered by Glu217.
Febs Lett., 592, 2018
6AG9
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Crystal structure of uPA in complex with 3,5-bis(azanyl)-6-(1-benzofuran-2-yl)-N-carbamimidoyl-pyrazine-2- carboxamide
分子名称: 3,5-bis(azanyl)-6-(1-benzofuran-2-yl)-N-carbamimidoyl-pyrazine-2-carboxamide, SULFATE ION, Urokinase-type plasminogen activator
著者Buckley, B, Jiang, L.G, Majed, H, Huang, M.D, Kelso, M, Ranson, M.
登録日2018-08-09
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献uPA-HMA
To Be Published
6AGZ
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Crystal structure of Old Yellow Enzyme from Pichia sp. AKU4542
分子名称: FLAVIN MONONUCLEOTIDE, Old Yellow Enzyme
著者Horita, S, Kataoka, M, Kitamura, N, Nakagawa, T, Miyakawa, T, Ohtsuka, J, Nagata, K, Shimizu, S, Tanokura, M.
登録日2018-08-15
公開日2019-06-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of different substrate preferences of two old yellow enzymes from yeasts in the asymmetric reduction of enone compounds.
Biosci.Biotechnol.Biochem., 83, 2019
6AJ4
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Crystal structure of the DHR-2 domain of DOCK7 in complex with Cdc42
分子名称: Cell division control protein 42 homolog, Dedicator of cytokinesis protein 7
著者Kukimoto-Niino, M, Shirouzu, M.
登録日2018-08-27
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.256 Å)
主引用文献Structural Basis for the Dual Substrate Specificity of DOCK7 Guanine Nucleotide Exchange Factor.
Structure, 27, 2019
3B7K
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Human Acyl-coenzyme A thioesterase 12
分子名称: Acyl-coenzyme A thioesterase 12, COENZYME A
著者Lehtio, L, Busam, R.D, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Sundstrom, M, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Berglund, H, Structural Genomics Consortium (SGC)
登録日2007-10-31
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Human Acyl-coenzyme A thioesterase 12.
To be Published
6AJL
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DOCK7 mutant I1836Y complexed with Cdc42
分子名称: Cell division control protein 42 homolog, Dedicator of cytokinesis protein 7
著者Kukimoto-Niino, M, Shirouzu, M.
登録日2018-08-28
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.23 Å)
主引用文献Structural Basis for the Dual Substrate Specificity of DOCK7 Guanine Nucleotide Exchange Factor.
Structure, 27, 2019
7CPZ
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Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
分子名称: BIOTIN, Mature Streptoavidin-C1
著者Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
登録日2020-08-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
6AG2
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uPA-HMA
分子名称: 3,5-bis(azanyl)-N-carbamimidoyl-6-(2-methoxypyrimidin-5-yl)pyrazine-2-carboxamide, SULFATE ION, Urokinase-type plasminogen activator
著者Buckley, B, Jiang, L.G, Huang, M.D, Kelso, M, Ranson, M.
登録日2018-08-09
公開日2019-09-18
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献uPA-HMA
To Be Published
7CQ0
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Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
分子名称: Mature Streptoavidin-C1
著者Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
登録日2020-08-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
6AGB
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Cryo-EM structure of yeast Ribonuclease P
分子名称: RNases MRP/P 32.9 kDa subunit, Ribonuclease P RNA, Ribonuclease P protein subunit RPR2, ...
著者Lan, P, Tan, M, Wu, J, Lei, M.
登録日2018-08-10
公開日2018-10-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Structural insight into precursor tRNA processing by yeast ribonuclease P.
Science, 362, 2018
6AIG
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Crystal structure of PCNA1 from Aeropyrum pernix
分子名称: DNA polymerase sliding clamp 1
著者Yamauchi, T, Kikuchi, M, Tsunoda, M.
登録日2018-08-23
公開日2018-09-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of PCNA1 from Aeropyrum pernix
To Be Published
19GS
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Glutathione s-transferase p1-1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,3'-(4,5,6,7-TETRABROMO-3-OXO-1(3H)-ISOBENZOFURANYLIDENE)BIS [6-HYDROXYBENZENESULFONIC ACID]ANION, GLUTATHIONE, ...
著者Oakley, A.J, Lo Bello, M, Parker, M.W.
登録日1997-12-14
公開日1998-12-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The ligandin (non-substrate) binding site of human Pi class glutathione transferase is located in the electrophile binding site (H-site).
J.Mol.Biol., 291, 1999
1ACJ
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QUATERNARY LIGAND BINDING TO AROMATIC RESIDUES IN THE ACTIVE-SITE GORGE OF ACETYLCHOLINESTERASE
分子名称: ACETYLCHOLINESTERASE, TACRINE
著者Sussman, J.L, Harel, M, Silman, I.
登録日1993-08-18
公開日1994-08-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Quaternary ligand binding to aromatic residues in the active-site gorge of acetylcholinesterase.
Proc.Natl.Acad.Sci.USA, 90, 1993
1ACL
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QUATERNARY LIGAND BINDING TO AROMATIC RESIDUES IN THE ACTIVE-SITE GORGE OF ACETYLCHOLINESTERASE
分子名称: ACETYLCHOLINESTERASE, DECAMETHONIUM ION
著者Sussman, J.L, Harel, M, Silman, I.
登録日1993-08-18
公開日1994-08-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Quaternary ligand binding to aromatic residues in the active-site gorge of acetylcholinesterase.
Proc.Natl.Acad.Sci.USA, 90, 1993
6AS4
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Structure of a phage anti-CRISPR protein
分子名称: NHis AcrE1 anti-crispr protein
著者Shah, M, Calmettes, C, Pawluk, A, Mejdani, M, Davidson, A.R, Maxwell, K.L, Moraes, T.F.
登録日2017-08-23
公開日2017-12-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Disabling a Type I-E CRISPR-Cas Nuclease with a Bacteriophage-Encoded Anti-CRISPR Protein.
MBio, 8, 2017

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