Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51787 件

3ZS5
DownloadVisualize
BU of 3zs5 by Molmil
Structural basis for kinase selectivity of three clinical p38alpha inhibitors
分子名称: 1,2-ETHANEDIOL, 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE, MITOGEN-ACTIVATED PROTEIN KINASE 14, ...
著者Azevedo, R, van Zeeland, M, Raaijmakers, H.C.A, Kazemier, B, Oubrie, A.
登録日2011-06-23
公開日2012-07-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray structure of p38 alpha bound to TAK-715: comparison with three classic inhibitors.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
2L4N
DownloadVisualize
BU of 2l4n by Molmil
Solution Structure of the Chemokine CCL21
分子名称: C-C motif chemokine 21
著者Veldkamp, C.T, Peterson, F.C, Love, M, Sandberg, J.L.
登録日2010-10-10
公開日2011-11-02
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of CCL21 and identification of a putative CCR7 binding site.
Biochemistry, 51, 2012
3X2L
DownloadVisualize
BU of 3x2l by Molmil
X-ray structure of PcCel45A apo form at 95K.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-methylpentane-1,5-diol, Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Ohta, K, Tanaka, H, Inaka, K, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (0.83 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
3ZJE
DownloadVisualize
BU of 3zje by Molmil
A20 OTU domain in reversibly oxidised (SOH) state
分子名称: 1,2-ETHANEDIOL, A20P50, CHLORIDE ION
著者Kulathu, Y, Garcia, F.J, Mevissen, T.E.T, Busch, M, Arnaudo, N, Carroll, K.S, Barford, D, Komander, D.
登録日2013-01-17
公開日2013-03-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Regulation of A20 and Other Otu Deubiquitinases by Reversible Oxidation
Nat.Commun., 4, 2013
4F60
DownloadVisualize
BU of 4f60 by Molmil
Crystal structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant (T148L, G171Q, A172V, C176F).
分子名称: FLUORIDE ION, Haloalkane dehalogenase
著者Plevaka, M, Kuta-Smatanova, I, Rezacova, P.
登録日2012-05-14
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel.
Angew.Chem.Int.Ed.Engl., 52, 2013
3ZK8
DownloadVisualize
BU of 3zk8 by Molmil
CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA E205Q IN THE METAL-FREE, OPEN STATE
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
著者Counago, R.M, Ween, M.P, Bajaj, M, Zuegg, J, Cooper, M.A, McEwan, A.G, Paton, J.C, Kobe, B, McDevitt, C.A.
登録日2013-01-22
公開日2013-11-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Imperfect coordination chemistry facilitates metal ion release in the Psa permease.
Nat. Chem. Biol., 10, 2014
2LA8
DownloadVisualize
BU of 2la8 by Molmil
Solution structure of INAD PDZ5 complexed with Kon-tiki peptide
分子名称: Inactivation-no-after-potential D protein,kon-tiki peptide
著者Zhang, M, Wen, W.
登録日2011-03-08
公開日2011-11-30
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The INAD scaffold is a dynamic, redox-regulated modulator of signaling in the Drosophila eye
Cell(Cambridge,Mass.), 145, 2011
2LGE
DownloadVisualize
BU of 2lge by Molmil
NMR structure of the calcium-bound form of the protein YP_001302112.1 from Parabacteroides distasonis
分子名称: Uncharacterized protein
著者Serrano, P, Geralt, M, Mohanty, B, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
登録日2011-07-25
公開日2011-08-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure of the calcium-bound form of the protein YP_001302112.1 from Parabacteroides distasonis
To be Published
4XL5
DownloadVisualize
BU of 4xl5 by Molmil
X-ray structure of bGFP-A / EGFP complex
分子名称: Green fluorescent protein, bGFP-A
著者Chevrel, A, Urvoas, A, Li de la Sierra-Gallay, I, Van Tilbeurgh, H, Minard, P, Valerio-Lepiniec, M.
登録日2015-01-13
公開日2015-08-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Specific GFP-binding artificial proteins ( alpha Rep): a new tool for in vitro to live cell applications.
Biosci.Rep., 35, 2015
2LM3
DownloadVisualize
BU of 2lm3 by Molmil
Structure of the rhesus monkey TRIM5alpha PRYSPRY domain
分子名称: Tripartite motif-containing protein 5
著者Biris, N, Yang, Y, Taylor, A.B, Tomashevski, A, Guo, M, Hart, P.J, Diaz-Griffero, F, Ivanov, D.N.
登録日2011-11-21
公開日2012-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the rhesus monkey TRIM5alpha PRYSPRY domain, the HIV capsid recognition module.
Proc.Natl.Acad.Sci.USA, 109, 2012
2LLL
DownloadVisualize
BU of 2lll by Molmil
Solution NMR structure of C-terminal globular domain of human Lamin-B2, Northeast Structural Genomics Consortium target HR8546A
分子名称: Lamin-B2
著者Lemak, A, Yee, A, Houliston, S, Garcia, M, Xu, C, Min, J, Montelione, G.T, Arrowsmith, C, Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)
登録日2011-11-11
公開日2011-12-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution structure of c-terminal globular domain of human Lamin-B2
To be Published
3ZDG
DownloadVisualize
BU of 3zdg by Molmil
Crystal Structure of Ls-AChBP complexed with carbamoylcholine analogue 3-(dimethylamino)butyl dimethylcarbamate (DMABC)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(dimethylamino)butyl dimethylcarbamate, ACETYLCHOLINE BINDING PROTEIN, ...
著者Ussing, C.A, Hansen, C.P, Petersen, J.G, Jensen, A.A, Rohde, L.A.H, Ahring, P.K, Nielsen, E.O, Kastrup, J.S, Gajhede, M, Frolund, B, Balle, T.
登録日2012-11-26
公開日2013-02-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Synthesis, Pharmacology, and Biostructural Characterization of Novel Alpha(4)Beta(2) Nicotinic Acetylcholine Receptor Agonists.
J.Med.Chem., 56, 2013
1MO0
DownloadVisualize
BU of 1mo0 by Molmil
Structural Genomics Of Caenorhabditis Elegans: Triose Phosphate Isomerase
分子名称: ACETATE ION, SULFATE ION, Triosephosphate isomerase
著者Symersky, J, Li, S, Finley, J, Liu, Z.-J, Qui, H, Luan, C.H, Carson, M, Tsao, J, Johnson, D, Lin, G, Zhao, J, Thomas, W, Nagy, L.A, Sha, B, DeLucas, L.J, Wang, B.-C, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2002-09-06
公開日2002-09-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural genomics of Caenorhabditis elegans: triosephosphate isomerase
Proteins, 51, 2003
2LQH
DownloadVisualize
BU of 2lqh by Molmil
NMR structure of FOXO3a transactivation domains (CR2C-CR3) in complex with CBP KIX domain (2b3l conformation)
分子名称: CREB-binding protein, Forkhead box O3
著者Wang, F, Marshall, C.B, Yamamoto, K, Li, G.B, Gasmi-Seabrook, G.M.C, Okada, H, Mak, T.W, Ikura, M.
登録日2012-03-06
公開日2012-05-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of KIX domain of CBP in complex with two FOXO3a transactivation domains reveal promiscuity and plasticity in coactivator recruitment.
Proc.Natl.Acad.Sci.USA, 109, 2012
3ZFS
DownloadVisualize
BU of 3zfs by Molmil
Cryo-EM structure of the F420-reducing NiFe-hydrogenase from a methanogenic archaeon with bound substrate
分子名称: CARBONMONOXIDE-(DICYANO) IRON, COENZYME F420, F420-REDUCING HYDROGENASE, ...
著者Mills, D.J, Vitt, S, Strauss, M, Shima, S, Vonck, J.
登録日2012-12-12
公開日2013-03-06
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献De Novo Modeling of the F420-Reducing [Nife]-Hydrogenase from a Methanogenic Archaeon by Cryo-Electron Microscopy
Elife, 2, 2013
2L29
DownloadVisualize
BU of 2l29 by Molmil
Complex structure of E4 mutant human IGF2R domain 11 bound to IGF-II
分子名称: Insulin-like growth factor 2 receptor variant, Insulin-like growth factor II
著者Williams, C, Hoppe, H, Rezgui, D, Strickland, M, Frago, S, Ellis, R.Z, Wattana-Amorn, P, Prince, S.N, Zaccheo, O.J, Forbes, B, Jones, E.Y, Crump, M.P, Hassan, A.B.
登録日2010-08-13
公開日2012-02-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献An exon splice enhancer primes IGF2:IGF2R binding site structure and function evolution.
Science, 338, 2012
3ZHC
DownloadVisualize
BU of 3zhc by Molmil
Structure of the phytase from Citrobacter braakii at 2.3 angstrom resolution.
分子名称: CHLORIDE ION, FORMIC ACID, PHYTASE
著者Wilson, K.S, Ariza, A, Sanchez-Romero, I, Skjot, M, Vind, J, DeMaria, L, Skov, L.K, Sanchez-Ruiz, J.M.
登録日2012-12-20
公開日2013-08-28
最終更新日2017-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanism of Protein Kinetic Stabilization by Engineered Disulfide Crosslinks
Plos One, 8, 2013
3ZVG
DownloadVisualize
BU of 3zvg by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 98
分子名称: 3C PROTEASE, N-(tert-butoxycarbonyl)-O-tert-butyl-L-threonyl-N-{(2R)-5-ethoxy-5-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]pentan-2-yl}-L-phenylalaninamide
著者Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
登録日2011-07-24
公開日2012-08-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
8AAA
DownloadVisualize
BU of 8aaa by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
分子名称: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Spike protein S1, Stapled peptide
著者Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
登録日2022-06-30
公開日2023-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023
2L4E
DownloadVisualize
BU of 2l4e by Molmil
NMR structure of the UBA domain of S. cerevisiae Dcn1
分子名称: Defective in cullin neddylation protein 1
著者Burschowsky, D, Rudolf, F, Mattle, D, Peter, M, Wider, G.
登録日2010-10-05
公開日2011-10-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural analysis of the ubiquitin-associated domain (UBA) of yeast Dcn1 in complex with ubiquitin
To be Published
3X0E
DownloadVisualize
BU of 3x0e by Molmil
Crystal structure of the ectodomain of human CD81 large extracellular loop (hCD81-LEL)
分子名称: CD81 antigen, MAGNESIUM ION
著者Zhang, M, Cui, S.
登録日2014-10-14
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.844 Å)
主引用文献An intramolecular bond at cluster of differentiation 81 ectodomain is important for hepatitis C virus entry.
Faseb J., 29, 2015
2LRV
DownloadVisualize
BU of 2lrv by Molmil
Assignment of E coli periplasmic protein YmgD
分子名称: Uncharacterized protein ymgD
著者Wu, K, Inouye, M, Baum, J, Hsu, S, Masuda, H.
登録日2012-04-13
公開日2013-04-17
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of homodimeric periplasmic protein YmgD in E. coli
To be Published
3X0G
DownloadVisualize
BU of 3x0g by Molmil
Crystal structure of the ectodomain of African green monkey CD81 large extracellular loop (agmCD81-LEL)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CD81
著者Zhang, M, Cui, S.
登録日2014-10-14
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献An intramolecular bond at cluster of differentiation 81 ectodomain is important for hepatitis C virus entry.
Faseb J., 29, 2015
2LK0
DownloadVisualize
BU of 2lk0 by Molmil
Solution structure and binding studies of the RanBP2-type zinc finger of RBM5
分子名称: RNA-binding protein 5, ZINC ION
著者Farina, B, Pellecchia, M.
登録日2011-09-30
公開日2011-12-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Targeting Zinc Finger Domains with Small Molecules: Solution Structure and Binding Studies of the RanBP2-Type Zinc Finger of RBM5.
Chembiochem, 12, 2011
3X2N
DownloadVisualize
BU of 3x2n by Molmil
Proton relay pathway in inverting cellulase
分子名称: Endoglucanase V-like protein, SULFATE ION
著者Nakamura, A, Ishida, T, Fushinobu, S, Igarashi, K, Samejima, M.
登録日2014-12-22
公開日2015-10-14
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon