Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 件

7Y7E
DownloadVisualize
BU of 7y7e by Molmil
Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.41 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
7Y7G
DownloadVisualize
BU of 7y7g by Molmil
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
7Y7H
DownloadVisualize
BU of 7y7h by Molmil
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
8AX1
DownloadVisualize
BU of 8ax1 by Molmil
Crystal structure of Trametes versicolor glutathione transferase Omega 3S in complex with hydroxy-tetranitro-nitrosyl-ruthenate
分子名称: ACETATE ION, CALCIUM ION, GLYCEROL, ...
著者Schwartz, M, Didierjean, C.
登録日2022-08-30
公開日2023-03-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into the interactions of glutathione transferases with a nitric oxide carrier and sodium nitroprusside.
Biochem.Biophys.Res.Commun., 649, 2023
1ZUJ
DownloadVisualize
BU of 1zuj by Molmil
The crystal structure of the Lactococcus lactis MG1363 DpsA protein
分子名称: hypothetical protein Llacc01001955
著者Stillman, T.J, Upadhyay, M, Norte, V.A, Sedelnikova, S.E, Carradus, M, Tzokov, S, Bullough, P.A, Shearman, C.A, Gasson, M.J, Williams, C.H, Artymiuk, P.J, Green, J.
登録日2005-05-31
公開日2005-08-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structures of Lactococcus lactis MG1363 Dps proteins reveal the presence of an N-terminal helix that is required for DNA binding.
Mol.Microbiol., 57, 2005
1ZQ5
DownloadVisualize
BU of 1zq5 by Molmil
Crystal structure of human androgenic 17beta-hydroxysteroid dehydrogenase type 5 in complexed with a potent inhibitor EM1404
分子名称: 3-CARBOXAMIDO-1,3,5(10)-ESTRATRIEN-17(R)-SPIRO-2'(5',5'-DIMETHYL-6'OXO)TETRAHYDROPYRAN, ACETATE ION, Aldo-keto reductase family 1 member C3, ...
著者Qiu, W, Zhou, M, Ghanmi, D, Luu-The, V, Labrie, F, Lin, S.X.
登録日2005-05-18
公開日2006-12-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure-based inhibitor design for an enzyme that binds different steroids: a potent inhibitor for human type 5 17beta-hydroxysteroid dehydrogenase.
J.Biol.Chem., 282, 2007
1RCY
DownloadVisualize
BU of 1rcy by Molmil
RUSTICYANIN (RC) FROM THIOBACILLUS FERROOXIDANS
分子名称: COPPER (II) ION, RUSTICYANIN
著者Walter, R.L, Friedman, A.M, Ealick, S.E, Blake II, R.C, Proctor, P, Shoham, M.
登録日1996-04-10
公開日1997-05-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multiple wavelength anomalous diffraction (MAD) crystal structure of rusticyanin: a highly oxidizing cupredoxin with extreme acid stability.
J.Mol.Biol., 263, 1996
6IO4
DownloadVisualize
BU of 6io4 by Molmil
Silver-bound Glyceraldehyde-3-phosphate dehydrogenase A
分子名称: Glyceraldehyde-3-phosphate dehydrogenase A, SILVER ION
著者Wang, H, Sun, H, Wang, M.
登録日2018-10-29
公開日2019-07-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Antimicrobial silver targets glyceraldehyde-3-phosphate dehydrogenase in glycolysis ofE. coli.
Chem Sci, 10, 2019
6RX3
DownloadVisualize
BU of 6rx3 by Molmil
Crystal structure of human syncytin 2 in post-fusion conformation
分子名称: CHLORIDE ION, Syncytin-2
著者Ruigrok, K, Backovic, M, Vaney, M.C, Rey, F.A.
登録日2019-06-07
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray Structures of the Post-fusion 6-Helix Bundle of the Human Syncytins and their Functional Implications.
J.Mol.Biol., 431, 2019
1BXP
DownloadVisualize
BU of 1bxp by Molmil
SOLUTION NMR STRUCTURE OF THE COMPLEX OF ALPHA-BUNGAROTOXIN WITH A LIBRARY DERIVED PEPTIDE, 20 STRUCTURES
分子名称: ALPHA-BUNGAROTOXIN, PEPTIDE MET-ARG-TYR-TYR-GLU-SER-SER-LEU-LYS-SER-TYR-PRO-ASP
著者Scherf, T, Balass, M, Fuchs, S, Katchalski-Katzir, E, Anglister, J.
登録日1998-08-23
公開日1999-01-27
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the complex of alpha-bungarotoxin with a library-derived peptide.
Proc.Natl.Acad.Sci.USA, 94, 1997
6WZU
DownloadVisualize
BU of 6wzu by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2 , P3221 space group
分子名称: CHLORIDE ION, GLYCEROL, Non-structural protein 3, ...
著者Osipiuk, J, Tesar, C, Endres, M, Jedrzejczak, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-05-14
公開日2020-05-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors.
Nat Commun, 12, 2021
6WPK
DownloadVisualize
BU of 6wpk by Molmil
SARM1 Autoinhibited Conformation
分子名称: NAD(+) hydrolase SARM1
著者Xie, T, Bratkowski, M, Bai, X, Sambashivan, S.
登録日2020-04-27
公開日2020-08-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and Mechanistic Regulation of the Prodegenerative NAD Hydrolase SARM1
Cell Rep, 32, 2020
5AVC
DownloadVisualize
BU of 5avc by Molmil
human nucleosome core particle
分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Wakamori, M, Fujii, Y, Umehara, T, Yokoyama, S.
登録日2015-06-12
公開日2015-12-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Intra- and inter-nucleosomal interactions of the histone H4 tail revealed with a human nucleosome core particle with genetically-incorporated H4 tetra-acetylation
Sci Rep, 5, 2015
8AIT
DownloadVisualize
BU of 8ait by Molmil
Crystal structure of cutinase PbauzCut from Pseudomonas bauzanensis
分子名称: Cutinase, SULFATE ION
著者Zahn, M, Allen, M.D, Pickford, A.R, McGeehan, J.E.
登録日2022-07-27
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Concentration-Dependent Inhibition of Mesophilic PETases on Poly(ethylene terephthalate) Can Be Eliminated by Enzyme Engineering.
ChemSusChem, 16, 2023
8AKN
DownloadVisualize
BU of 8akn by Molmil
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
分子名称: 16S ribosomal RNA, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 23S ribosomal RNA, ...
著者Koller, T.O, Morici, M, Wilson, D.N.
登録日2022-07-30
公開日2023-03-08
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural basis for translation inhibition by the glycosylated drosocin peptide.
Nat.Chem.Biol., 19, 2023
6QUC
DownloadVisualize
BU of 6quc by Molmil
Truncated beta-galactosidase III from Bifidobacterium bifidum
分子名称: Beta-galactosidase, CALCIUM ION, IMIDAZOLE
著者Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
登録日2019-02-27
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6GKE
DownloadVisualize
BU of 6gke by Molmil
Aleuria aurantia lectin AAL N224Q mutant in complex with Fucalpha1-6GlcNAc
分子名称: 1,2-ETHANEDIOL, Fucose-specific lectin, GLYCEROL, ...
著者Houser, J, Wimmerova, M, Herrera, H, Mehta, A.S.
登録日2018-05-19
公開日2019-06-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Structural dynamics and applications of a fucose-binding lectin with enhanced binding to alpha-1,6-linked core fucosylation
To Be Published
1BLI
DownloadVisualize
BU of 1bli by Molmil
BACILLUS LICHENIFORMIS ALPHA-AMYLASE
分子名称: ALPHA-AMYLASE, CALCIUM ION, SODIUM ION
著者Machius, M, Declerck, N, Huber, R, Wiegand, G.
登録日1998-01-07
公開日1999-03-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Activation of Bacillus licheniformis alpha-amylase through a disorder-->order transition of the substrate-binding site mediated by a calcium-sodium-calcium metal triad.
Structure, 6, 1998
6GM5
DownloadVisualize
BU of 6gm5 by Molmil
[FeFe]-hydrogenase HydA1 from Chlamydomonas reinhardtii,variant E141A
分子名称: CHLORIDE ION, Fe-hydrogenase, IRON/SULFUR CLUSTER, ...
著者Duan, J, Engelbrecht, V, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
登録日2018-05-24
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
7TT3
DownloadVisualize
BU of 7tt3 by Molmil
BamABCDE bound to substrate EspP class 5
分子名称: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
登録日2022-01-31
公開日2022-03-30
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
1BT8
DownloadVisualize
BU of 1bt8 by Molmil
P.SHERMANII SOD(FE+3) PH 10.0
分子名称: FE (III) ION, SUPEROXIDE DISMUTASE
著者Schmidt, M.
登録日1998-09-01
公開日1999-06-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Manipulating the coordination mumber of the ferric iron within the cambialistic superoxide dismutase of Propionibacterium shermanii by changing the pH-value A crystallographic analysis
Eur.J.Biochem., 262, 1999
7TT4
DownloadVisualize
BU of 7tt4 by Molmil
BamABCDE bound to substrate EspP class 6
分子名称: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
登録日2022-01-31
公開日2022-03-30
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
6QW2
DownloadVisualize
BU of 6qw2 by Molmil
The Transcriptional Regulator PrfA-A218G mutant from Listeria Monocytogenes
分子名称: ISOPROPYL ALCOHOL, Listeriolysin positive regulatory factor A, SODIUM ION
著者Hall, M, Grundstrom, C, Hansen, S, Brannstrom, K, Johansson, J, Sauer-Eriksson, A.E.
登録日2019-03-05
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Novel Growth-Based Selection Strategy Identifies New Constitutively Active Variants of the Major Virulence Regulator PrfA in Listeria monocytogenes.
J.Bacteriol., 202, 2020
6GLA
DownloadVisualize
BU of 6gla by Molmil
Crystal structure of JAK3 in complex with Compound 11 (FM481)
分子名称: (~{E})-3-[5-(3-cyclohexyl-3,5,8,10-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1(9),2(6),4,7,11-pentaen-4-yl)furan-2-yl]prop-2-enenitrile, 1,2-ETHANEDIOL, 1-phenylurea, ...
著者Chaikuad, A, Forster, M, von Delft, F, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Laufer, S.A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2018-05-23
公開日2018-06-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Development, Optimization, and Structure-Activity Relationships of Covalent-Reversible JAK3 Inhibitors Based on a Tricyclic Imidazo[5,4- d]pyrrolo[2,3- b]pyridine Scaffold.
J. Med. Chem., 61, 2018
7TSZ
DownloadVisualize
BU of 7tsz by Molmil
BamABCDE bound to substrate EspP class 1
分子名称: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
登録日2022-01-31
公開日2022-03-30
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon