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PDB: 52230 results

7Q0F
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Structure of Candida albicans 80S ribosome in complex with phyllanthoside
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
Authors:Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-14
Release date:2022-05-18
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7PZY
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Structure of the vacant Candida albicans 80S ribosome
Descriptor: 1,4-DIAMINOBUTANE, 18S ribosomal RNA, 25S ribosomal RNA, ...
Authors:Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-13
Release date:2022-05-18
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q08
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Structure of Candida albicans 80S ribosome in complex with cycloheximide
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-14
Release date:2022-05-25
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7UFS
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Cryo-EM Structure of Bl_Man38B at 3.4 A
Descriptor: Alpha-mannosidase, ZINC ION
Authors:Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V.
Deposit date:2022-03-23
Release date:2022-11-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structure of Bl_Man38B at 3.4 A
Nat.Chem.Biol., 2022
8WKZ
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Crystal structure of the Melanocortin-4 Receptor (MC4R) in complex with S31
Descriptor: CALCIUM ION, Melanocortin receptor 4, OLEIC ACID, ...
Authors:Gimenez, L.E, Martin, C, Yu, J, Hollanders, C, Hernandez, C, Dahir, N.S, Wu, Y, Yao, D, Han, G.W, Wu, L, Poorten, O.V, Lamouroux, A, Mannes, M, Tourwe, D, Zhao, S, Stevens, R.C, Cone, R.D, Ballet, S.
Deposit date:2023-09-28
Release date:2024-08-07
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Novel Cocrystal Structures of Peptide Antagonists Bound to the Human Melanocortin Receptor 4 Unveil Unexplored Grounds for Structure-Based Drug Design.
J.Med.Chem., 67, 2024
7Q0R
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BU of 7q0r by Molmil
Structure of the Candida albicans 80S ribosome in complex with blasticidin s
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
Authors:Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-16
Release date:2022-05-25
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q34
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Crystal structure of the multidrug binding transcriptional regulator LmrR in complex squaraine dye
Descriptor: 2,4-bis[(E)-(1-ethyl-3,3-dimethyl-indol-2-ylidene)methyl]cyclobutane-1,3-dione, Helix-turn-helix transcriptional regulator, NICKEL (II) ION
Authors:Liutkus, M, Mejias, S.H, Barolo, C, Cortajarena, A.L.
Deposit date:2021-10-26
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Designing Artificial Fluorescent Proteins: Squaraine-LmrR Biophosphors for High Performance Deep-Red Biohybrid Light-Emitting Diodes
Adv Funct Mater, 32, 2022
7UVE
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BU of 7uve by Molmil
Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac
Descriptor: Histone-lysine N-methyltransferase eggless, peptide H3K9me2K14ac
Authors:Zhou, M, Dong, A, Liu, K, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2022-05-01
Release date:2022-08-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac
To Be Published
7UW8
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Drosophila melanogaster setdb1-tuor domain
Descriptor: Histone-lysine N-methyltransferase eggless
Authors:Zhou, M, Dong, A, Liu, K, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2022-05-03
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Drosophila melanogaster setdb1-tuor domain
To Be Published
4TNM
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BU of 4tnm by Molmil
Crystal structure of Arabidopsis importin-alpha3 armadillo repeat domain
Descriptor: Importin subunit alpha
Authors:Wirthmueller, L, Banfield, M.
Deposit date:2014-06-04
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Probing formation of cargo/importin-alpha transport complexes in plant cells using a pathogen effector.
Plant J., 81, 2015
7UPS
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BU of 7ups by Molmil
Structural study of Legionella pneumophila effector DotY (Lpg0294)
Descriptor: 1,2-ETHANEDIOL, DotY (Lpg0294)
Authors:Chung, I.Y.W, Cygler, M.
Deposit date:2022-04-16
Release date:2022-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural study of Legionella pneumophila effector DotY (Lpg0294), a component of the Dot/Icm type IV secretion system.
Acta Crystallogr.,Sect.F, 78, 2022
8XI9
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BU of 8xi9 by Molmil
Crystal structure of FRB-FKBP fusion protein in complex with rapamycin
Descriptor: FRB-FKBP fusion protein, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
Authors:Inobe, T, Sakaguchi, R, Obita, T, Mukaiyama, A, Yokoyama, T, Mizuguchi, M, Akiyama, S.
Deposit date:2023-12-19
Release date:2024-08-07
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insights into rapamycin-induced oligomerization of a FRB-FKBP fusion protein.
Febs Lett., 598, 2024
7UFT
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BU of 7uft by Molmil
Cryo-EM Structure of Bl_Man38C at 2.9 A
Descriptor: Alpha-mannosidase, ZINC ION
Authors:Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V.
Deposit date:2022-03-23
Release date:2022-11-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM Structure of Bl_Man38C at 2.9 A
Nat.Chem.Biol., 2022
8WGO
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BU of 8wgo by Molmil
Cryo-EM structure of ClassIII Lanthipeptide modification enzyme PneKC in the presence of PneA and GTPrS.
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Li, Y, Luo, M, Shao, K, Li, J.
Deposit date:2023-09-22
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mechanistic insights into lanthipeptide modification by a distinct subclass of LanKC enzyme that forms dimers.
Nat Commun, 15, 2024
1ESM
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BU of 1esm by Molmil
STRUCTURAL BASIS FOR THE FEEDBACK REGULATION OF ESCHERICHIA COLI PANTOTHENATE KINASE BY COENZYME A
Descriptor: COENZYME A, PANTOTHENATE KINASE
Authors:Yun, M, Park, C.G, Kim, J.Y, Rock, C.O, Jackowski, S, Park, H.W.
Deposit date:2000-04-10
Release date:2000-09-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the feedback regulation of Escherichia coli pantothenate kinase by coenzyme A.
J.Biol.Chem., 275, 2000
7UPV
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BU of 7upv by Molmil
Structure of maize BZR1-type beta-amylase provides new insights into its noncatalytic adaptation
Descriptor: Beta-amylase, GLYCEROL
Authors:Palayam, M, Sun, F, Shabek, N.
Deposit date:2022-04-18
Release date:2022-08-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure of maize BZR1-type beta-amylase BAM8 provides new insights into its noncatalytic adaptation.
J.Struct.Biol., 214, 2022
7UPZ
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BU of 7upz by Molmil
Structural basis for cell type specific DNA binding of C/EBPbeta: the case of cell cycle inhibitor p15INK4b promoter
Descriptor: CCAAT/enhancer-binding protein beta, DNA (5'-D(*AP*TP*TP*CP*TP*TP*AP*AP*GP*AP*AP*AP*GP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*CP*TP*TP*TP*CP*TP*TP*AP*AP*GP*AP*A)-3')
Authors:Lountos, G.T, Cherry, S, Tropea, J.E, Wlodawer, A, Miller, M.
Deposit date:2022-04-18
Release date:2022-11-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Structural basis for cell type specific DNA binding of C/EBP beta : The case of cell cycle inhibitor p15INK4b promoter.
J.Struct.Biol., 214, 2022
1EUG
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BU of 1eug by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI URACIL DNA GLYCOSYLASE AND ITS COMPLEXES WITH URACIL AND GLYCEROL: STRUCTURE AND GLYCOSYLASE MECHANISM REVISITED
Descriptor: PROTEIN (GLYCOSYLASE)
Authors:Xiao, G, Tordova, M, Jagadeesh, J, Drohat, A.C, Stivers, J.T, Gilliland, G.L.
Deposit date:1998-10-12
Release date:1999-10-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited.
Proteins, 35, 1999
1EFO
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BU of 1efo by Molmil
CRYSTAL STRUCTURE OF AN ADENINE BULGE IN THE RNA CHAIN OF A DNA/RNA HYBRID, D(CTCCTCTTC)/R(GAAGAGAGAG)
Descriptor: DNA (5'-D(*CP*TP*CP*CP*TP*CP*TP*TP*C)-3'), RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*GP*AP*G)-3')
Authors:Sudarsanakumar, C, Xiong, Y, Sundaralingam, M.
Deposit date:2000-02-09
Release date:2000-05-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an adenine bulge in the RNA chain of a DNA.RNA hybrid, d(CTCCTCTTC).r(gaagagagag).
J.Mol.Biol., 299, 2000
6JIB
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BU of 6jib by Molmil
Human MTHFD2 in complex with DS44960156
Descriptor: 4-(5-oxo-1,5-dihydro-2H-[1]benzopyrano[3,4-c]pyridine-3(4H)-carbonyl)benzoic acid, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, ...
Authors:Suzuki, M, Matsui, Y, Kawai, J.
Deposit date:2019-02-20
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-Based Design and Synthesis of an Isozyme-Selective MTHFD2 Inhibitor with a Tricyclic Coumarin Scaffold.
Acs Med.Chem.Lett., 10, 2019
1EVP
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BU of 1evp by Molmil
CRYSTAL STRUCTURE OF THE CHIMERICAL DECAMER D(CCACTAGTG)R(G)
Descriptor: DNA/RNA (5'-D(*CP*CP*AP*CP*TP*AP*GP*TP*GP)-R(*G)-3')
Authors:Wahl, M.C, Sundaralingam, M.
Deposit date:2000-04-20
Release date:2000-05-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:B-form to A-form conversion by a 3'-terminal ribose: crystal structure of the chimera d(CCACTAGTG)r(G).
Nucleic Acids Res., 28, 2000
6JNF
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Cryo-EM structure of the translocator of the outer mitochondrial membrane
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate, Mitochondrial import receptor subunit TOM22, Mitochondrial import receptor subunit TOM40, ...
Authors:Araiso, Y, Tsutsumi, A, Suzuki, J, Yunoki, K, Kawano, S, Kikkawa, M, Endo, T.
Deposit date:2019-03-14
Release date:2019-10-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.81 Å)
Cite:Structure of the mitochondrial import gate reveals distinct preprotein paths.
Nature, 575, 2019
1EIY
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BU of 1eiy by Molmil
THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE
Descriptor: PHENYLALANYL-TRNA SYNTHETASE, TRNA(PHE)
Authors:Goldgur, Y, Mosyak, L, Reshetnikova, L, Ankilova, V, Safro, M.
Deposit date:2000-02-29
Release date:2000-03-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe.
Structure, 5, 1997
1E5U
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BU of 1e5u by Molmil
NMR Representative Structure of Intimin-190 (Int190) from Enteropathogenic E. coli
Descriptor: INTIMIN
Authors:Prasannan, S, Matthews, S.J, Batchelor, M, Daniell, S, Reece, S, Frankel, G, Dougan, G, Connerton, I, Bloomberg, G.
Deposit date:2000-08-02
Release date:2000-08-16
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structural Basis for Recognition of the Translocated Intimin Receptor (Tir) by Intimin from Enteropathogenic E. Coli
Embo J., 19, 2000
6JQF
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Crystallization analysis of a beta-N-acetylhexosaminidase (Am2136) from Akkermansia muciniphila
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glycoside hydrolase, ...
Authors:Zhang, M, Chen, X.
Deposit date:2019-03-31
Release date:2019-12-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical characteristics and crystallographic evidence for substrate-assisted catalysis of a beta-N-acetylhexosaminidase in Akkermansia muciniphila.
Biochem.Biophys.Res.Commun., 517, 2019

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