Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52259 results

1YOW
DownloadVisualize
BU of 1yow by Molmil
human Steroidogenic Factor 1 LBD with bound Co-factor Peptide
Descriptor: PHOSPHATIDYL ETHANOL, Steroidogenic factor 1, TIF2 peptide
Authors:Krylova, I.N, Sablin, E.P, Xu, R.X, Waitt, G.M, Juzumiene, D, Williams, J.D, Ingraham, H.A, Willson, T.M, Williams, S.P, Montana, V, Madauss, K.P, Moore, J, Bynum, J.M, Lebedeva, L, MacKay, J.A, Suzawa, M, Guy, R.K, Thornton, J.W.
Deposit date:2005-01-28
Release date:2005-05-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1
Cell(Cambridge,Mass.), 120, 2005
1YP1
DownloadVisualize
BU of 1yp1 by Molmil
Crystal structure of a non-hemorrhagic fibrin(ogen)olytic metalloproteinase from venom of Agkistrodon acutus
Descriptor: FII, KNL, ZINC ION
Authors:Lou, Z, Hou, J, Chen, J, Liang, X, Qiu, P, Liu, Y, Li, M, Rao, Z.
Deposit date:2005-01-28
Release date:2006-01-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a non-hemorrhagic fibrin(ogen)olytic metalloproteinase complexed with a novel natural tri-peptide inhibitor from venom of Agkistrodon acutus
J.Struct.Biol., 152, 2005
2RPK
DownloadVisualize
BU of 2rpk by Molmil
Solution Structure of Domain II of the Positive Polarity CCHMVD Hammerhead Ribozyme
Descriptor: RNA (5'-R(*GP*GP*GP*AP*UP*CP*CP*AP*UP*GP*AP*CP*AP*GP*GP*AP*UP*CP*CP*C)-3')
Authors:Gallego, J, Dufour, D, de la Pena, M, Gago, S, Flores, R.
Deposit date:2008-05-28
Release date:2008-12-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure-function analysis of the ribozymes of chrysanthemum chlorotic mottle viroid: a loop-loop interaction motif conserved in most natural hammerheads
Nucleic Acids Res., 37, 2009
2RGI
DownloadVisualize
BU of 2rgi by Molmil
Crystal structure of Ca2+-free S100A2 at 1.6 A resolution
Descriptor: ISOPROPYL ALCOHOL, Protein S100-A2, SODIUM ION
Authors:Koch, M, Diez, J, Fritz, G.
Deposit date:2007-10-03
Release date:2008-01-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Ca2+ -free S100A2 at 1.6-A resolution.
J.Mol.Biol., 378, 2008
3NXK
DownloadVisualize
BU of 3nxk by Molmil
Crystal Structure of Probable Cytoplasmic L-asparaginase from Campylobacter jejuni
Descriptor: ACETIC ACID, Cytoplasmic L-asparaginase, GLYCEROL, ...
Authors:Kim, Y, Makowska-Grzyska, M, Maltseva, N, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-07-14
Release date:2010-08-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Probable Cytoplasmic L-asparaginase from Campylobacter jejuni
To be Published
1YTO
DownloadVisualize
BU of 1yto by Molmil
Crystal Structure of Gly19 deletion Mutant of Human Acidic Fibroblast Growth Factor
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Lee, J, Blaber, M.
Deposit date:2005-02-10
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conversion of type I 4:6 to 3:5 beta-turn types in human acidic fibroblast growth factor: Effects upon structure, stability, folding, and mitogenic function.
Proteins, 62, 2006
2RT5
DownloadVisualize
BU of 2rt5 by Molmil
Structural insights into the recruitment of SMRT by the co-repressor SHARP under phosphorylative regulation
Descriptor: Msx2-interacting protein, peptide from Silencing mediator of retinoic acid and thyroid hormone receptor
Authors:Mikami, S, Kanaba, T, Mishima, M.
Deposit date:2013-04-22
Release date:2013-12-04
Last modified:2022-08-24
Method:SOLUTION NMR
Cite:Structural insights into the recruitment of SMRT by the corepressor SHARP under phosphorylative regulation.
Structure, 22, 2014
4HC3
DownloadVisualize
BU of 4hc3 by Molmil
Crystal structure of PpcA V13T mutant
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, HEME C, PpcA, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2012-09-28
Release date:2012-10-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:V13 mutants of PpcA
To be Published
1YQM
DownloadVisualize
BU of 1yqm by Molmil
Catalytically inactive human 8-oxoguanine glycosylase crosslinked to 7-deazaguanine containing DNA
Descriptor: 5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*C)-3', 5'-D(P*GP*TP*CP*CP*AP*(7GU)P*GP*TP*CP*TP*AP*C)-3', CALCIUM ION, ...
Authors:Banerjee, A, Yang, W, Karplus, M, Verdine, G.L.
Deposit date:2005-02-02
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA.
Nature, 434, 2005
4HCE
DownloadVisualize
BU of 4hce by Molmil
Crystal structure of the telomeric Saccharomyces cerevisiae Cdc13 OB2 domain
Descriptor: Cell division control protein 13
Authors:Mason, M, Wannat, J.J, Harper, S, Schultz, D.C, Speicher, D.W, Johnson, F.B, Skordalakes, E.
Deposit date:2012-09-29
Release date:2012-11-28
Last modified:2013-01-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cdc13 OB2 Dimerization Required for Productive Stn1 Binding and Efficient Telomere Maintenance.
Structure, 21, 2013
1YLN
DownloadVisualize
BU of 1yln by Molmil
The Crystal Structure of the Protein of Unknown Function VCA0042 from Vibrio cholerae O1
Descriptor: hypothetical protein vca0042
Authors:Zhang, R, Zhou, M, Moy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-01-19
Release date:2005-03-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of the hypothetical protein vca0042 from Vibrio cholerae O1
To be Published
4ZN0
DownloadVisualize
BU of 4zn0 by Molmil
Structure of the NADPH-dependent thioredoxin reductase from Methanosarcina mazei
Descriptor: Thioredoxin reductase
Authors:Buey, R.M, de Pereda, J.M, Balsera, M.
Deposit date:2015-05-04
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Apo-Form of NADPH-Dependent Thioredoxin Reductase from a Methane-Producing Archaeon.
Antioxidants (Basel), 7, 2018
7ZS0
DownloadVisualize
BU of 7zs0 by Molmil
Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis
Descriptor: CALCIUM ION, GLYCEROL, HEME C, ...
Authors:Akram, M, Barends, T.
Deposit date:2022-05-05
Release date:2023-05-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism
To Be Published
4ZOU
DownloadVisualize
BU of 4zou by Molmil
Crystal structure of the BTB domain of SLX4
Descriptor: Structure-specific endonuclease subunit SLX4
Authors:Wan, B, Chen, Y, Wu, J, Liu, Y, Lei, M.
Deposit date:2015-05-07
Release date:2016-05-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The BTB domain is both a structural and functional pivot of the SLX4-nuclease complex
to be published
1YSW
DownloadVisualize
BU of 1ysw by Molmil
Solution structure of the anti-apoptotic protein Bcl-2 complexed with an acyl-sulfonamide-based ligand
Descriptor: 3-NITRO-N-{4-[2-(2-PHENYLETHYL)-1,3-BENZOTHIAZOL-5-YL]BENZOYL}-4-{[2-(PHENYLSULFANYL)ETHYL]AMINO}BENZENESULFONAMIDE, Apoptosis regulator Bcl-2
Authors:Oltersdorf, T, Elmore, S.W, Shoemaker, A.R, Armstrong, R.C, Augeri, D.J, Belli, B.A, Bruncko, M, Deckwerth, T.L, Dinges, J, Hajduk, P.J, Joseph, M.K, Kitada, S, Korsmeyer, S.J, Kunzer, A.R, Letai, A, Li, C, Mitten, M.J, Nettesheim, D.G, Ng, S, Nimmer, P.M, O'Connor, J.M, Oleksijew, A, Petros, A.M, Reed, J.C, Shen, W, Tahir, S.K, Thompson, C.B, Tomaselli, K.J, Wang, B, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H.
Deposit date:2005-02-09
Release date:2005-06-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Nature, 435, 2005
4HDL
DownloadVisualize
BU of 4hdl by Molmil
Crystal structure of PpcA F15L mutant
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, HEME C, PpcA, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2012-10-02
Release date:2012-10-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:F15L mutant of PpcA
To be Published
3O4B
DownloadVisualize
BU of 3o4b by Molmil
Crystal structure of Symfoil-4T: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, SULFATE ION, ...
Authors:Lee, J, Blaber, M.
Deposit date:2010-07-26
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
7ZS1
DownloadVisualize
BU of 7zs1 by Molmil
Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis, M292C mutant
Descriptor: CALCIUM ION, GLYCEROL, HEME C, ...
Authors:Akram, M, Barends, T.
Deposit date:2022-05-05
Release date:2023-05-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism
To Be Published
7ZS2
DownloadVisualize
BU of 7zs2 by Molmil
Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis, M292H mutant
Descriptor: CALCIUM ION, HEME C, Hypothetical (Diheme) protein, ...
Authors:Akram, M, Barends, T.
Deposit date:2022-05-05
Release date:2023-05-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism
To Be Published
1YTY
DownloadVisualize
BU of 1yty by Molmil
Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen
Descriptor: 5'-R(*UP*GP*CP*UP*GP*UP*UP*UP*U)-3', Lupus La protein
Authors:Teplova, M, Yuan, Y.R, Ilin, S, Malinina, L, Phan, A.T, Teplov, A, Patel, D.J.
Deposit date:2005-02-11
Release date:2006-01-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural Basis for Recognition and Sequestration of UUU(OH) 3' Temini of Nascent RNA Polymerase III Transcripts by La, a Rheumatic Disease Autoantigen.
Mol.Cell, 21, 2006
4X9U
DownloadVisualize
BU of 4x9u by Molmil
Crystal structure of the kiwifruit allergen Act d 5
Descriptor: Kiwellin
Authors:Offermann, L.R, Perdue, M.L, Giangrieco, I, Tamburrini, M, Ciardiello, M.A, Chruszcz, M.
Deposit date:2014-12-11
Release date:2015-07-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Elusive Structural, Functional, and Immunological Features of Act d 5, the Green Kiwifruit Kiwellin.
J.Agric.Food Chem., 63, 2015
5AJ9
DownloadVisualize
BU of 5aj9 by Molmil
G7 mutant of PAS, arylsulfatase from Pseudomonas Aeruginosa
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ARYLSULFATASE, CALCIUM ION, ...
Authors:Miton, C.M, Fischer, G, Jonas, S, Mohammed, M.F, Loo, B.v, Kintses, B, Hyvonen, M, Tokuriki, N, Hollfelder, F.
Deposit date:2015-02-20
Release date:2016-03-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3O97
DownloadVisualize
BU of 3o97 by Molmil
Crystal Structure of the complex of C-lobe of lactoferrin with indole acetic acid at 2.68 A Resolution
Descriptor: 1H-INDOL-3-YLACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shukla, P.K, Sinha, M, Bhushan, A, Vikram, G, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-08-04
Release date:2010-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Crystal Structure of the complex of C-lobe of lactoferrin with indole acetic acid at 2.68 A Resolution
To be Published
5ABS
DownloadVisualize
BU of 5abs by Molmil
CRYSTAL STRUCTURE OF THE C-TERMINAL COILED-COIL DOMAIN OF CIN85 IN SPACE GROUP P321
Descriptor: SH3 DOMAIN-CONTAINING KINASE-BINDING PROTEIN 1, ZINC ION
Authors:Wong, L, Habeck, M, Griesinger, C, Becker, S.
Deposit date:2015-08-07
Release date:2016-07-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The Adaptor Protein Cin85 Assembles Intracellular Signaling Clusters for B Cell Activation.
Sci.Signal., 9, 2016
4ZTB
DownloadVisualize
BU of 4ztb by Molmil
Crystal structure of nsP2 protease from Chikungunya virus in P212121 space group at 2.59 A (4molecules/ASU).
Descriptor: GLYCEROL, Protease nsP2
Authors:Narwal, M, Pratap, S, Singh, H, Kumar, P, Tomar, S.
Deposit date:2015-05-14
Release date:2016-06-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of chikungunya virus nsP2 cysteine protease reveals a putative flexible loop blocking its active site.
Int.J.Biol.Macromol., 116, 2018

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon