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PDB: 52259 results

4GYG
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Crystal structure of the Rio2 kinase from Chaetomium thermophilum
Descriptor: Rio2 kinase
Authors:Ferreira-Cerca, S, Sagar, V, Schafer, T, Diop, M, Wesseling, A.M, Lu, H, Chai, E, Hurt, E, LaRonde-LeBlanc, N.
Deposit date:2012-09-05
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.482 Å)
Cite:ATPase-dependent role of the atypical kinase Rio2 on the evolving pre-40S ribosomal subunit.
Nat.Struct.Mol.Biol., 19, 2012
2RQ7
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Solution structure of the epsilon subunit chimera combining the N-terminal beta-sandwich domain from T. Elongatus bp-1 f1 and the C-terminal alpha-helical domain from spinach chloroplast F1
Descriptor: ATP synthase epsilon chain,ATP synthase epsilon chain, chloroplastic
Authors:Yagi, H, Konno, H, Murakami-Fuse, T, Oroguchi, H, Akutsu, T, Ikeguchi, M, Hisabori, T.
Deposit date:2009-03-03
Release date:2010-01-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and functional analysis of the intrinsic inhibitor subunit epsilon of F1-ATPase from photosynthetic organisms.
Biochem.J., 425, 2010
1XE8
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Crystal structure of the YML079w protein from Saccharomyces cerevisiae reveals a new sequence family of the jelly roll fold.
Descriptor: ADENINE, CITRIC ACID, GLYCEROL, ...
Authors:Zhou, C.-Z, Meyer, P, Quevillon-Cheruel, S, Li de La Sierra-Gallay, I, Collinet, B, Graille, M, Leulliot, N, Sorel, I, Janin, J, Van Tilbeurgh, H.
Deposit date:2004-09-09
Release date:2005-01-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the YML079w protein from Saccharomyces cerevisiae reveals a new sequence family of the jelly-roll fold
Protein Sci., 14, 2005
1XE1
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BU of 1xe1 by Molmil
Hypothetical Protein From Pyrococcus Furiosus Pfu-880080-001
Descriptor: SULFATE ION, hypothetical protein PF0907
Authors:Chang, J.C, Zhao, M, Zhou, W, Liu, Z.J, Tempel, W, Arendall III, W.B, Chen, L, Lee, D, Habel, J.E, Rose, J.P, Richardson, J.S, Richardson, D.C, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-08
Release date:2004-09-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Hypothetical Protein From Pyrococcus Furiosus Pfu-880080-001
To be published
2RQS
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3D structure of Pin from the psychrophilic archeon Cenarcheaum symbiosum (CsPin)
Descriptor: Parvulin-like peptidyl-prolyl isomerase
Authors:Zhukov, I, Jaremko, L, Jaremko, M, Mueller, J.W, Bayer, P.
Deposit date:2009-11-17
Release date:2010-11-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and Dynamics of the First Archaeal Parvulin Reveal a New Functionally Important Loop in Parvulin-type Prolyl Isomerases
J.Biol.Chem., 286, 2011
4ZNM
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BU of 4znm by Molmil
Crystal structure of SgcC5 protein from Streptomyces globisporus (apo form)
Descriptor: C-domain type II peptide synthetase, CHLORIDE ION, SODIUM ION
Authors:Michalska, K, Bigelow, L, Jedrzejczak, R, Babnigg, G, Lohman, J, Ma, M, Rudolf, J, Chang, C.-Y, Shen, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-05-04
Release date:2015-05-27
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Crystal structure of SgcC5 protein from Streptomyces globisporus (apo form)
To Be Published
3NSI
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BU of 3nsi by Molmil
Crystal Structure of the Post-Refolded S100A3 Protein Expressed in Insect Cell
Descriptor: Protein S100-A3
Authors:Unno, M, Takahara, H, Kizawa, K.
Deposit date:2010-07-01
Release date:2011-03-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Refined crystal structures of human Ca(2+)/Zn(2+)-binding S100A3 protein characterized by two disulfide bridges
J.Mol.Biol., 408, 2011
3W07
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BU of 3w07 by Molmil
Atomic resolution structure of orotidine 5'-monophosphate decarboxylase from Methanothermobacter thermoautotrophicus bound with UMP.
Descriptor: GLYCEROL, Orotidine 5'-phosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
Authors:Fujihashi, M, Pai, E.F, Miki, K.
Deposit date:2012-10-22
Release date:2013-02-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Atomic resolution structure of the orotidine 5'-monophosphate decarboxylase product complex combined with surface plasmon resonance analysis: implications for the catalytic mechanism.
J.Biol.Chem., 288, 2013
4ZIZ
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BU of 4ziz by Molmil
Serial Femtosecond Crystallography of Soluble Proteins in Lipidic Cubic Phase (C-Phycocyanin from T. elongatus)
Descriptor: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
Authors:Fromme, R, Ishchenko, A, Metz, M, Roy-Chowdhury, S, Basu, S, Boutet, S, Fromme, P, White, T.A, Barty, A, Spence, J.C.H, Weierstall, U, Liu, W, Cherezov, V.
Deposit date:2015-04-28
Release date:2015-08-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Serial femtosecond crystallography of soluble proteins in lipidic cubic phase.
IUCrJ, 2, 2015
2RH8
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Structure of apo anthocyanidin reductase from vitis vinifera
Descriptor: Anthocyanidin reductase, CHLORIDE ION
Authors:Gargouri, M, Mauge, C, Langlois D'Estaintot, B, Granier, T, Manigan, C, Gallois, B.
Deposit date:2007-10-08
Release date:2008-11-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and epimerase activity of anthocyanidin reductase from Vitis vinifera.
Acta Crystallogr.,Sect.D, 65, 2009
3NSK
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Crystal Structure of the Post-Refolded S100A3 R51A Mutant Expressed in Insect Cell
Descriptor: Protein S100-A3
Authors:Unno, M, Takahara, H, Kizawa, K.
Deposit date:2010-07-01
Release date:2011-03-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Refined crystal structures of human Ca(2+)/Zn(2+)-binding S100A3 protein characterized by two disulfide bridges
J.Mol.Biol., 408, 2011
1YP0
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BU of 1yp0 by Molmil
Structure of the steroidogenic factor-1 ligand binding domain bound to phospholipid and a SHP peptide motif
Descriptor: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, Nuclear receptor subfamily 0, group B, ...
Authors:Li, Y, Choi, M, Cavey, G, Daugherty, J, Suino, K, Kovach, A, Bingham, N, Kliewer, S, Xu, H.
Deposit date:2005-01-28
Release date:2005-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallographic identification and functional characterization of phospholipids as ligands for the orphan nuclear receptor steroidogenic factor-1.
Mol.Cell, 17, 2005
4H2K
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BU of 4h2k by Molmil
Crystal structure of the catalytic domain of succinyl-diaminopimelate desuccinylase from Haemophilus influenzae
Descriptor: Succinyl-diaminopimelate desuccinylase, ZINC ION
Authors:Nocek, B, Jedrzejczak, R, Makowska-Grzyska, M, Starus, A, Holz, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-09-12
Release date:2012-11-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:The dimerization domain in DapE enzymes is required for catalysis.
Plos One, 9, 2014
7ZIU
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BU of 7ziu by Molmil
Crystal structure of Ntaya virus NS5 polymerase domain
Descriptor: Genome polyprotein, ZINC ION
Authors:Krejcova, K, Klima, M, Boura, E.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional insights in flavivirus NS5 proteins gained by the structure of Ntaya virus polymerase and methyltransferase.
Structure, 32, 2024
4ZQB
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BU of 4zqb by Molmil
Crystal structure of NADP-dependent dehydrogenase from Rhodobactersphaeroides in complex with NADP and sulfate
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Kowiel, M, Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Porebski, P.J, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2015-05-08
Release date:2015-05-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of NADP-dependent dehydrogenase from Rhodobactersphaeroides in complex with NADP and sulfate
to be published
2RI8
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BU of 2ri8 by Molmil
Penicillium citrinum alpha-1,2-mannosidase complex with glycerol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Lobsanov, Y.D, Yoshida, T, Desmet, T, Nerinckx, W, Yip, P, Claeyssens, M, Herscovics, A, Howell, P.L.
Deposit date:2007-10-10
Release date:2008-03-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Modulation of activity by Arg407: structure of a fungal alpha-1,2-mannosidase in complex with a substrate analogue.
Acta Crystallogr.,Sect.D, 64, 2008
4H0W
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BU of 4h0w by Molmil
Bismuth bound human serum transferrin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bismuth(III) ION, CARBONATE ION, ...
Authors:Yang, N, Zhang, H, Wang, M, Hao, Q, Sun, H.
Deposit date:2012-09-10
Release date:2012-12-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Iron and bismuth bound human serum transferrin reveals a partially-opened conformation in the N-lobe.
Sci Rep, 2, 2012
7ZIX
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BU of 7zix by Molmil
X-ray structure of the haloalkane dehalogenase HaloTag7 bound to a butylmethanesulfonamide tetramethylrhodamine ligand (TMR-S4)
Descriptor: Haloalkane dehalogenase, [9-[2-carboxy-5-[2-[2-[4-(methylsulfonylamino)butoxy]ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium
Authors:Tarnawski, M, Kompa, J, Johnsson, K, Hiblot, J.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:X-ray structure of the haloalkane dehalogenase HaloTag7 bound to a butylmethanesulfonamide tetramethylrhodamine ligand (HSAm(4)-TMR)
To Be Published
3EQ5
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BU of 3eq5 by Molmil
Crystal structure of fragment 137 to 238 of the human Ski-like protein
Descriptor: Ski-like protein
Authors:Tresaugues, L, Wisniewska, M, Andersson, J, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Schueler, H, Thorsell, A.G, Van Den Berg, S, Welin, M, Wikstrom, M, Weigelt, J, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2008-09-30
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of fragment 137 to 238 of the human Ski-like protein.
To be Published
3NWZ
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BU of 3nwz by Molmil
Crystal Structure of BH2602 protein from Bacillus halodurans with CoA, Northeast Structural Genomics Consortium Target BhR199
Descriptor: BH2602 protein, COENZYME A, SULFATE ION
Authors:Kuzin, A, Su, M, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Lee, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-07-12
Release date:2010-09-08
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2.566 Å)
Cite:Northeast Structural Genomics Consortium Target BhR199
To be published
4H4C
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IspH in complex with (E)-4-fluoro-3-methylbut-2-enyl diphosphate
Descriptor: (2E)-4-fluoro-3-methylbut-2-en-1-yl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Span, I, Eisenreich, W, Jauch, J, Bacher, A, Groll, M.
Deposit date:2012-09-17
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of Fluoro, Amino, and Thiol Inhibitors Bound to the [Fe(4) S(4) ] Protein IspH.
Angew.Chem.Int.Ed.Engl., 52, 2013
4H4V
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BU of 4h4v by Molmil
Crystal Structure of Ferredoxin reductase, BphA4 E175C/T176R/Q177G mutant (oxidized form)
Descriptor: Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ...
Authors:Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S.
Deposit date:2012-09-18
Release date:2013-10-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
To be Published
1YNU
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BU of 1ynu by Molmil
Crystal structure of apple ACC synthase in complex with L-vinylglycine
Descriptor: 1-aminocyclopropane-1-carboxylate synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[O-PHOSPHONOPYRIDOXYL]-AMINO- BUTYRIC ACID, ...
Authors:Capitani, G, Tschopp, M, Eliot, A.C, Kirsch, J.F, Grutter, M.G.
Deposit date:2005-01-25
Release date:2005-05-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of ACC synthase inactivated by the mechanism-based inhibitor L-vinylglycine.
Febs Lett., 579, 2005
3IQ2
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Human sorting nexin 7, phox homology (PX) domain
Descriptor: GLYCEROL, SULFATE ION, Sorting nexin-7
Authors:Karlberg, T, Wisniewska, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kotenyova, T, Kotzsch, A, Kraulis, P, Nielsen, T.K, Moche, M, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Schutz, P, Siponen, M.I, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2009-08-19
Release date:2009-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Human Sorting Nexin 7, Phox Homology (Px) Domain
To be Published
1YSH
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BU of 1ysh by Molmil
Localization and dynamic behavior of ribosomal protein L30e
Descriptor: 40S RIBOSOMAL PROTEIN S13, RNA (101-MER), RNA (28-MER), ...
Authors:Halic, M, Becker, T, Frank, J, Spahn, C.M, Beckmann, R.
Deposit date:2005-02-08
Release date:2005-07-05
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Localization and dynamic behavior of ribosomal protein L30e
Nat.Struct.Mol.Biol., 12, 2005

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PDB entries from 2024-11-13

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