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PDB: 133 results

4RMO
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BU of 4rmo by Molmil
Crystal Structure of the CptIN Type III Toxin-Antitoxin System from Eubacterium rectale
Descriptor: CALCIUM ION, CptN Toxin, RNA (45-MER)
Authors:Rao, F, Voss, J.E, Short, F.L, Luisi, B.F.
Deposit date:2014-10-21
Release date:2015-09-30
Last modified:2015-11-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Co-evolution of quaternary organization and novel RNA tertiary interactions revealed in the crystal structure of a bacterial protein-RNA toxin-antitoxin system.
Nucleic Acids Res., 43, 2015
8BVJ
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BU of 8bvj by Molmil
Hfq-Crc-estA translation repression complex
Descriptor: Catabolite repression control protein, RNA-binding protein Hfq, estA mRNA
Authors:Dendooven, T, Luisi, B.F.
Deposit date:2022-12-04
Release date:2023-01-25
Last modified:2023-02-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Translational regulation by Hfq-Crc assemblies emerges from polymorphic ribonucleoprotein folding.
Embo J., 42, 2023
6GWK
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BU of 6gwk by Molmil
The crystal structure of Hfq from Caulobacter crescentus
Descriptor: RNA-binding protein Hfq
Authors:Santiago-Frangos, A, Frohlich, K.S, Jeliazkov, J.R, Gray, J.R, Luisi, B.F, Woodson, S.A, Hardwick, S.W.
Deposit date:2018-06-25
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Caulobacter crescentusHfq structure reveals a conserved mechanism of RNA annealing regulation.
Proc.Natl.Acad.Sci.USA, 116, 2019
4CDI
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BU of 4cdi by Molmil
Crystal structure of AcrB-AcrZ complex
Descriptor: ACRIFLAVINE RESISTANCE PROTEIN B, PREDICTED PROTEIN
Authors:Du, D, James, N, Klimont, E, Luisi, B.F.
Deposit date:2013-10-31
Release date:2014-04-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structure of the Acrab-Tolc Multidrug Efflux Pump.
Nature, 509, 2014
4C48
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BU of 4c48 by Molmil
Crystal structure of AcrB-AcrZ complex
Descriptor: ACRIFLAVINE RESISTANCE PROTEIN B, DARPIN, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Du, D, James, N, Klimont, E, Luisi, B.F.
Deposit date:2013-09-02
Release date:2014-04-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the AcrAB-TolC multidrug efflux pump.
Nature, 509, 2014
4OXP
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BU of 4oxp by Molmil
X-ray crystal structure of the S1 and 5'-sensor domains of RNase E from Caulobacter crescentus
Descriptor: Ribonuclease E
Authors:Voss, J.E, Luisi, B.F.L, Hardwick, S.W.
Deposit date:2014-02-06
Release date:2014-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome.
Nucleic Acids Res., 42, 2014
1IBE
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BU of 1ibe by Molmil
DEOXY-HAEMOGLOBIN TRAPPED IN THE HIGH-AFFINITY (R) STATE
Descriptor: HEMOGLOBIN (DEOXY), PROTOPORPHYRIN IX CONTAINING FE
Authors:Wilson, J, Phillips, K, Luisi, B.
Deposit date:1996-09-25
Release date:1996-12-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of horse deoxyhaemoglobin trapped in the high-affinity (R) state.
J.Mol.Biol., 264, 1996
5A0T
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BU of 5a0t by Molmil
Catalysis and 5' end sensing by ribonuclease RNase J of the metallo- beta-lactamase family
Descriptor: 5'-R(*CP*GP*CP*CP*UP)-3', DI(HYDROXYETHYL)ETHER, RIBONUCLEASE J, ...
Authors:Pei, X.Y, Bralley, P, Jones, G.H, Luisi, B.F.
Deposit date:2015-04-22
Release date:2015-08-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.283 Å)
Cite:Linkage of Catalysis and 5' End Recognition in Ribonuclease Rnase J
Nucleic Acids Res., 43, 2015
5AOH
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BU of 5aoh by Molmil
Crystal Structure of CarF
Descriptor: POTASSIUM ION, Spore coat protein CotH
Authors:Tichy, E.M, Hardwick, S.W, Luisi, B.F, C Salmond, G.P.
Deposit date:2015-09-10
Release date:2017-01-25
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 angstrom resolution crystal structure of the carbapenem intrinsic resistance protein CarF.
Acta Crystallogr D Struct Biol, 73, 2017
5FT0
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BU of 5ft0 by Molmil
Crystal structure of gp37(Dip) from bacteriophage phiKZ
Descriptor: ARGININE, GP37, POTASSIUM ION
Authors:Van den Bossche, A, Hardwick, S.W, Ceyssens, P.J, Hendrix, H, Voet, M, Dendooven, T, Bandyra, K.J, De Maeyer, M, Aertsen, A, Noben, J.P, Luisi, B.F, Lavigne, R.
Deposit date:2016-01-08
Release date:2016-08-03
Last modified:2017-03-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural elucidation of a novel mechanism for the bacteriophage-based inhibition of the RNA degradosome.
Elife, 5, 2016
8BVM
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BU of 8bvm by Molmil
Cryo-EM structure of Hfq-Crc-rbsB translation repression complex
Descriptor: Catabolite repression control protein, RNA-binding protein Hfq, rbsB mRNA
Authors:Dendooven, T, Luisi, B.F.
Deposit date:2022-12-04
Release date:2023-01-25
Last modified:2023-02-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Translational regulation by Hfq-Crc assemblies emerges from polymorphic ribonucleoprotein folding.
Embo J., 42, 2023
5A0V
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BU of 5a0v by Molmil
Catalysis and 5' end sensing by ribonuclease RNase J of the metallo- beta-lactamase family
Descriptor: 5'-R(*CP*GP*CP*CP*UP*CP)-3', CYTIDINE-5'-MONOPHOSPHATE, RIBONUCLEASE J, ...
Authors:Pei, X.Y, Bralley, P, Jones, G.H, Luisi, B.F.
Deposit date:2015-04-23
Release date:2015-08-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Linkage of Catalysis and 5' End Recognition in Ribonuclease Rnase J
Nucleic Acids Res., 43, 2015
8BVH
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BU of 8bvh by Molmil
Cryo-EM structure of the Hfq-Crc-amiE translation repression assembly.
Descriptor: Catabolite repression control protein, RNA-binding protein Hfq, amiE
Authors:Dendooven, T, Luisi, B.F.
Deposit date:2022-12-03
Release date:2023-06-07
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Translational regulation by Hfq-Crc assemblies emerges from polymorphic ribonucleoprotein folding.
Embo J., 42, 2023
1LR0
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BU of 1lr0 by Molmil
Pseudomonas aeruginosa TolA Domain III, Seleno-methionine Derivative
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TolA protein, ZINC ION
Authors:Witty, M, Sanz, C, Shah, A, Grossman, J.G, Mizuguchi, K, Perham, R.N, Luisi, B.
Deposit date:2002-05-14
Release date:2002-05-29
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.914 Å)
Cite:Structure of the periplasmic domain of Pseudomonas aeruginosa TolA: evidence for an evolutionary relationship with the TonB transporter protein.
EMBO J., 21, 2002
4QKK
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BU of 4qkk by Molmil
Crystal structure of an oligonucleotide containing 5-formylcytosine
Descriptor: DNA (5'-D(*CP*TP*AP*(5FC)P*GP*(5FC)P*GP*(5FC)P*GP*TP*AP*G)-3')
Authors:Raiber, E.-A, Murat, P, Chirgadze, D.Y, Luisi, B.F, Balasubramanian, S.
Deposit date:2014-06-06
Release date:2014-12-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:5-Formylcytosine alters the structure of the DNA double helix.
Nat.Struct.Mol.Biol., 22, 2015
5F6C
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BU of 5f6c by Molmil
The structure of E. coli RNase E catalytically inactive mutant with RNA bound
Descriptor: MAGNESIUM ION, RNA (5'-R(P*GP*U)-3'), RNA (5'-R(P*GP*UP*G)-3'), ...
Authors:Bandyra, K.J, Luisi, B.F.
Deposit date:2015-12-05
Release date:2016-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Substrate Recognition and Autoinhibition in the Central Ribonuclease RNase E.
Mol. Cell, 72, 2018
5FT1
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BU of 5ft1 by Molmil
Crystal structure of gp37(Dip) from bacteriophage phiKZ bound to RNase E of Pseudomonas aeruginosa
Descriptor: GP37, RIBONUCLEASE E
Authors:Van den Bossche, A, Hardwick, S.W, Ceyssens, P.J, Hendrix, H, Voet, M, Dendooven, T, Bandyra, K.J, De Maeyer, M, Aertsen, A, Noben, J.P, Luisi, B.F, Lavigne, R.
Deposit date:2016-01-08
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural elucidation of a novel mechanism for the bacteriophage-based inhibition of the RNA degradosome.
Elife, 5, 2016
6O1L
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BU of 6o1l by Molmil
Architectural principles for Hfq/Crc-mediated regulation of gene expression Hfq-Crc-amiE 2:3:2 complex
Descriptor: Catabolite repression control protein, RNA (5'-R(*AP*AP*AP*AP*AP*UP*AP*AP*CP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA-binding protein Hfq
Authors:Pei, X.Y, Dendooven, T, Sonnleitner, E, Chen, S, Blasi, U, Luisi, B.F.
Deposit date:2019-02-20
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Architectural principles for Hfq/Crc-mediated regulation of gene expression.
Elife, 8, 2019
6O1K
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BU of 6o1k by Molmil
Architectural principles for Hfq/Crc-mediated regulation of gene expression. Hfq-Crc-amiE 2:2:2 complex (core complex)
Descriptor: Catabolite repression control protein, RNA (5'-R(*AP*AP*AP*AP*AP*UP*AP*AP*CP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA-binding protein Hfq
Authors:Pei, X.Y, Dendooven, T, Sonnleitner, E, Chen, S, Blasi, U, Luisi, B.F.
Deposit date:2019-02-20
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Architectural principles for Hfq/Crc-mediated regulation of gene expression
Elife, 8, 2019
5V5S
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BU of 5v5s by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, Outer membrane protein TolC
Authors:wang, Z, fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-15
Release date:2017-04-19
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
5NC5
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BU of 5nc5 by Molmil
Crystal structure of AcrBZ in complex with antibiotic puromycin
Descriptor: DARPin, DECANE, DODECANE, ...
Authors:Du, D, Luisi, B.
Deposit date:2017-03-03
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
6O1M
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BU of 6o1m by Molmil
Architectural principles for Hfq/Crc-mediated regulation of gene expression. Hfq-Crc-amiE 2:4:2 complex
Descriptor: Catabolite repression control protein, RNA (5'-R(*AP*AP*AP*AP*AP*UP*AP*AP*CP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA-binding protein Hfq
Authors:Pei, X.Y, Dendooven, T, Sonnleitner, E, Chen, S, Blasi, U, Luisi, B.F.
Deposit date:2019-02-20
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Architectural principles for Hfq/Crc-mediated regulation of gene expression.
Elife, 8, 2019
1P7J
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BU of 1p7j by Molmil
Crystal structure of engrailed homeodomain mutant K52E
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Segmentation polarity homeobox protein engrailed
Authors:Stollar, E.J, Mayor, U, Lovell, S.C, Federici, L, Freund, S.M, Fersht, A.R, Luisi, B.F.
Deposit date:2003-05-02
Release date:2003-10-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Engrailed Homeodomain Mutants: IMPLICATIONS FOR STABILITY AND DYNAMICS
J.Biol.Chem., 278, 2003
4O7J
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BU of 4o7j by Molmil
Crystal structure of CarG
Descriptor: CarG, SODIUM ION
Authors:Tichy, E.M, Luisi, B.F, Salmond, G.P.C.
Deposit date:2013-12-24
Release date:2014-03-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the carbapenem intrinsic resistance protein CarG
J.Mol.Biol., 426, 2014
1P7I
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BU of 1p7i by Molmil
CRYSTAL STRUCTURE OF ENGRAILED HOMEODOMAIN MUTANT K52A
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Segmentation polarity homeobox protein engrailed
Authors:Stollar, E.J, Mayor, U, Lovell, S.C, Federici, L, Freund, S.M, Fersht, A.R, Luisi, B.F.
Deposit date:2003-05-02
Release date:2003-10-14
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Engrailed Homeodomain Mutants: IMPLICATIONS FOR STABILITY AND DYNAMICS
J.Biol.Chem., 278, 2003

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