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PDB: 15 件
4QKS
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BU of 4qks by Molmil
Crystal Structure of 6xTrp/PV2: de novo designed beta-trefoil architecture with symmetric primary structure (L22W/L44W/L64W/L85W/L108W/L132W his Primitive Version 2)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DE NOVO PROTEIN 6XTRP/PV2, SULFATE ION
著者Longo, L.M, Tenorio, C.A, Blaber, M.
登録日2014-06-09
公開日2015-01-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A single aromatic core mutation converts a designed "primitive" protein from halophile to mesophile folding.
Protein Sci., 24, 2015
4QKR
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BU of 4qkr by Molmil
Crystal Structure of 6xTyr/PV2: de novo designed beta-trefoil architecture with symmetric primary structure (L22Y/L44Y/L64Y/L85Y/L108Y/L132Y, Primitive Version 2)
分子名称: DE NOVO PROTEIN 6XTYR/PV2, IMIDAZOLE
著者Longo, L.M, Blaber, M, Tenorio, C.A.
登録日2014-06-09
公開日2015-01-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献A single aromatic core mutation converts a designed "primitive" protein from halophile to mesophile folding.
Protein Sci., 24, 2015
6LFG
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BU of 6lfg by Molmil
Cryo-EM structure of the Drosophila CTP synthase product-bound filament
分子名称: CTP synthase
著者Ji-long, L, Xian, Z, Chen-Jun, G.
登録日2019-12-02
公開日2020-03-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (9.58 Å)
主引用文献Drosophila CTP synthase can form distinct substrate- and product-bound filaments.
J Genet Genomics, 46, 2019
6M6P
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BU of 6m6p by Molmil
Structure of Marine bacterial laminarinase mutant E135A in complex with 1,3-beta-cellotriosyl-glucose
分子名称: CALCIUM ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose, laminarinase
著者Yang, J, Xu, Y, Tanokura, M, Long, L, Miyakawa, T.
登録日2020-03-16
公開日2020-09-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6L6Z
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BU of 6l6z by Molmil
Cryo-EM structure of the Drosophila CTP synthase substrate-bound filament
分子名称: CTP synthase
著者Ji-Long, L, Xian, Z, Chen-Jun, G.
登録日2019-10-30
公開日2020-03-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.09 Å)
主引用文献Drosophila CTP synthase can form distinct substrate- and product-bound filaments.
J Genet Genomics, 46, 2019
6JH5
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BU of 6jh5 by Molmil
Structure of Marine bacterial laminarinase
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Ru, L, Tanokura, M, Long, L.
登録日2019-02-17
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6JHJ
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BU of 6jhj by Molmil
Structure of Marine bacterial laminarinase mutant-E135A
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Tanokura, M, Long, L.
登録日2019-02-18
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6JIA
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BU of 6jia by Molmil
Marine bacterial laminarinase mutant E135A complex with laminaritetraose
分子名称: CALCIUM ION, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose, laminarinase
著者Yang, J, Xu, Y, Miyakawa, T, Tanokura, M, Long, L.
登録日2019-02-20
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
3SNV
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BU of 3snv by Molmil
Crystal structure of Symfoil-4T Permutation #1: de novo designed beta-trefoil architecture with symmetric primary structure
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, Symfoil-4T/Permutation #1 synthetic protein
著者Blaber, M, Longo, L, Lee, J.
登録日2011-06-29
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Folding pathway redundancy in symmetric protein architecture
To be Published
6ITC
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BU of 6itc by Molmil
Structure of a substrate engaged SecA-SecY protein translocation machine
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Ma, C.Y, Wu, X.F, Sun, D.J, Park, E.Y, Rapoport, T.A, Gao, N, Long, L.
登録日2018-11-21
公開日2019-06-12
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structure of the substrate-engaged SecA-SecY protein translocation machine.
Nat Commun, 10, 2019
8CYI
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BU of 8cyi by Molmil
Cryo-EM structures and computational analysis for enhanced potency in MTA-synergic inhibition of human protein arginine methyltransferase 5
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein 50, N-[(2-aminoquinolin-7-yl)methyl]-9-(2-hydroxyethyl)-2,3,4,9-tetrahydro-1H-carbazole-6-carboxamide, ...
著者Yadav, G.P, Wei, Z, Xiaozhi, Y, Chenglong, L, Jiang, Q.
登録日2022-05-23
公開日2023-04-12
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Cryo-EM structure-based selection of computed ligand poses enables design of MTA-synergic PRMT5 inhibitors of better potency.
Commun Biol, 5, 2022
8QDH
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BU of 8qdh by Molmil
Engineered LmrR carrying a cyclic boronate ester formed between Tris and p-boronophenylalanine at position 89
分子名称: GLYCEROL, Transcriptional regulator, PadR-like family
著者Thunnissen, A.M.W.H, Rozeboom, H.J, Longwitz, L, Leveson-Gower, R.B, Roelfes, G.
登録日2023-08-29
公開日2024-05-01
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Boron catalysis in a designer enzyme.
Nature, 629, 2024
8QDF
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BU of 8qdf by Molmil
Engineered LmrR with Met-89 replaced by para-boronophenylalanine
分子名称: Transcriptional regulator, PadR-like family
著者Thunnissen, A.M.W.H, Rozeboom, H.J, Longwitz, L, Leveson-Gower, R.B, Roelfes, G.
登録日2023-08-29
公開日2024-05-01
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Boron catalysis in a designer enzyme.
Nature, 629, 2024
4OW4
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BU of 4ow4 by Molmil
Beta-trefoil designed by folding nucleus symmetric expansion ("Phifoil")
分子名称: Beta-terfoil designed by folding nucleus symmetric expansion ("Phifoil"), SULFATE ION
著者Blaber, M, Longo, L.M.
登録日2014-01-31
公開日2014-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Evolution and design of protein structure by folding nucleus symmetric expansion.
Structure, 22, 2014
4D8H
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BU of 4d8h by Molmil
Crystal structure of Symfoil-4P/PV2: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 2 (6xLeu / PV1)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo protein
著者Blaber, M, Longo, L.
登録日2012-01-10
公開日2013-01-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein.
Proc.Natl.Acad.Sci.USA, 110, 2013

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件を2024-07-31に公開中

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