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PDB: 71 results

8J5I
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BU of 8j5i by Molmil
MALT1 death domain
Descriptor: Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Lo, Y.C, Kuo, B.J.
Deposit date:2023-04-22
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:MALT1 death domain
To Be Published
5SUM
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BU of 5sum by Molmil
Ribosome assembly factor NSA1
Descriptor: Ribosome biogenesis protein NSA1
Authors:Lo, Y.H, Stanley, R.E.
Deposit date:2016-08-03
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ribosome assembly factor
To Be Published
5SUI
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Ribosome assembly factor NSA1: C-terminal truncation
Descriptor: Ribosome biogenesis protein NSA1
Authors:Lo, Y.H, Stanley, R.E.
Deposit date:2016-08-03
Release date:2017-04-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Ribosome assembly factor
To Be Published
1V2G
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BU of 1v2g by Molmil
The L109P mutant of E. coli Thioesterase I/Protease I/Lysophospholipase L1 (TAP) in complexed with octanoic acid
Descriptor: Acyl-CoA thioesterase I, IMIDAZOLE, OCTANOIC ACID (CAPRYLIC ACID), ...
Authors:Lo, Y.-C, Lin, S.-C, Liaw, Y.-C.
Deposit date:2003-10-15
Release date:2004-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate specificities of Escherichia coli thioesterase I/protease I/lysophospholipase L1 are governed by its switch loop movement
Biochemistry, 44, 2005
1J00
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E. coli Thioesterase I/Protease I/Lysophospholipase L1 in complexed with diethyl phosphono moiety
Descriptor: SULFATE ION, Thioesterase I
Authors:Lo, Y.-C, Shaw, J.-F, Liaw, Y.-C.
Deposit date:2002-10-18
Release date:2003-07-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Escherichia coli Thioesterase I/Protease I/Lysophospholipase L1: Consensus Sequence Blocks Constitute the Catalytic Center of SGNH-hydrolases through a Conserved Hydrogen Bond Network
J.Mol.Biol., 330, 2003
1IVN
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BU of 1ivn by Molmil
E.coli Thioesterase I/Protease I/Lysophospholiase L1
Descriptor: GLYCEROL, SULFATE ION, Thioesterase I
Authors:Lo, Y.-C, Shaw, J.-F, Liaw, Y.-C.
Deposit date:2002-03-27
Release date:2003-07-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Escherichia coli Thioesterase I/Protease I/Lysophospholipase L1: Consensus Sequence Blocks Constitute the Catalytic Center of SGNH-hydrolases through a Conserved Hydrogen Bond Network
J.Mol.Biol., 330, 2003
4APV
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BU of 4apv by Molmil
The Klebsiella pneumoniae primosomal PriB protein: identification, crystal structure, and ssDNA binding mode
Descriptor: PRIMOSOMAL REPLICATION PROTEIN N
Authors:Lo, Y.H, Huang, Y.H, Hsiao, C.D, Huang, C.Y.
Deposit date:2012-04-06
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Crystal Structure and DNA-Binding Mode of Klebsiella Pneumoniae Primosomal Prib Protein.
Genes Cells, 17, 2012
4HIV
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BU of 4hiv by Molmil
Structure of actinomycin D d(ATGCGGCAT) complex
Descriptor: ACTINOMYCIN D, DNA (5'-D(*AP*TP*GP*CP*GP*GP*CP*AP*T)-3')
Authors:Lo, Y.S, Tseng, W.H, Hou, M.H.
Deposit date:2012-10-12
Release date:2013-05-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structural basis of actinomycin D-binding induces nucleotide flipping out, a sharp bend and a left-handed twist in CGG triplet repeats.
Nucleic Acids Res., 41, 2013
5H07
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TNIP2-Ub complex, C2 form
Descriptor: Polyubiquitin-C, TNFAIP3-interacting protein 2
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2016-10-04
Release date:2017-03-08
Method:X-RAY DIFFRACTION (2.586 Å)
Cite:Structural Insights into Linear Tri-ubiquitin Recognition by A20-Binding Inhibitor of NF-kappa B, ABIN-2
Structure, 25, 2017
8RJK
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BU of 8rjk by Molmil
Pseudoatomic model of a second-order Sierpinski triangle formed by the citrate synthase from Synechococcus elongatus
Descriptor: Citrate synthase
Authors:Lo, Y.K, Bohn, S, Sendker, F.L, Schuller, J.M, Hochberg, G.
Deposit date:2023-12-21
Release date:2024-02-28
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (5.91 Å)
Cite:Emergence of fractal geometries in the evolution of a metabolic enzyme.
Nature, 2024
2VYF
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BU of 2vyf by Molmil
Crystal Structure of the DnaC
Descriptor: GOLD ION, REPLICATIVE DNA HELICASE
Authors:Lo, Y.H, Tsai, K.L, Sun, Y.J, Hsiao, C.D.
Deposit date:2008-07-23
Release date:2008-12-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Crystal Structure of a Replicative Hexameric Helicase Dnac and its Complex with Single-Stranded DNA.
Nucleic Acids Res., 37, 2009
2VYE
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BU of 2vye by Molmil
Crystal Structure of the DnaC-ssDNA complex
Descriptor: 5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP)-3', REPLICATIVE DNA HELICASE
Authors:Lo, Y.H, Tsai, K.L, Sun, Y.J, Hsiao, C.D.
Deposit date:2008-07-23
Release date:2008-12-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:The Crystal Structure of a Replicative Hexameric Helicase Dnac and its Complex with Single-Stranded DNA.
Nucleic Acids Res., 37, 2009
1U8U
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BU of 1u8u by Molmil
E. coli Thioesterase I/Protease I/Lysophospholiase L1 in complexed with octanoic acid
Descriptor: Acyl-CoA thioesterase I, GLYCEROL, OCTANOIC ACID (CAPRYLIC ACID), ...
Authors:Lo, Y.-C, Lin, S.-C, Liaw, Y.-C.
Deposit date:2004-08-07
Release date:2005-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Substrate specificities of Escherichia coli thioesterase I/protease I/lysophospholipase L1 are governed by its switch loop movement
Biochemistry, 44, 2005
7EAO
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BU of 7eao by Molmil
The structure of the A20-binding inhibitor of NF-kB 1 in complex with tri-ubiquitin
Descriptor: Polyubiquitin-C, TNFAIP3-interacting protein 1
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2021-03-07
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins.
J.Mol.Biol., 433, 2021
7EAL
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BU of 7eal by Molmil
The structure of the A20-Binding Inhibitor of NF-kB 1 in complex with di-ubiquitin
Descriptor: GLYCEROL, TNFAIP3-interacting protein 1, ubiquitin
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2021-03-07
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins.
J.Mol.Biol., 433, 2021
7EB9
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BU of 7eb9 by Molmil
The structure of the A20-binding inhibitor of NF-kB 1 in complex with tetra-ubiquitin
Descriptor: TNFAIP3-interacting protein 1, tetra ubiquitin
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2021-03-09
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins.
J.Mol.Biol., 433, 2021
1JRL
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BU of 1jrl by Molmil
Crystal structure of E. coli Lysophospholiase L1/Acyl-CoA Thioesterase I/Protease I L109P mutant
Descriptor: Acyl-CoA Thioesterase I, IMIDAZOLE, SULFATE ION
Authors:Lo, Y.-C, Lin, S.-C, Shaw, J.-F, Liaw, Y.-C.
Deposit date:2001-08-14
Release date:2003-07-08
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Escherichia coli Thioesterase I/Protease I/Lysophospholipase L1: Consensus Sequence Blocks Constitute the Catalytic Center of SGNH-hydrolases through a Conserved Hydrogen Bond Network
J.Mol.Biol., 330, 2003
3FX0
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BU of 3fx0 by Molmil
Crystal structure of Human NEMO CC2_LZ domain
Descriptor: NF-kappa-B essential modulator
Authors:Lo, Y.C, Lin, S.C, Wu, H.
Deposit date:2009-01-19
Release date:2009-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for recognition of diubiquitins by NEMO.
Mol.Cell, 33, 2009
8AN1
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BU of 8an1 by Molmil
Structure of a first level Sierpinski triangle formed by a citrate synthase
Descriptor: Citrate synthase
Authors:Lo, Y.K, Bohn, S, Sendker, F.L, Schuller, J.M, Hochberg, G.
Deposit date:2022-08-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Evolution of a protein Sierpinski fractal
To Be Published
8BEI
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BU of 8bei by Molmil
Structure of hexameric subcomplexes (Truncation Delta2-6) of the fractal citrate synthase from Synechococcus elongatus PCC7942
Descriptor: Citrate synthase
Authors:Lo, Y.K, Bohn, S, Sendker, F.L, Schuller, J.M, Hochberg, G.
Deposit date:2022-10-21
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Evolution of a protein Sierpinski fractal
To Be Published
2ZZB
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BU of 2zzb by Molmil
Crystal structure of human thioredoxin reductase I and terpyridine platinum(II)
Descriptor: 2,2':6',2''-TERPYRIDINE PLATINUM(II) Chloride, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Lo, Y.C, Ko, T.P, Wang, A.H.J.
Deposit date:2009-02-09
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Terpyridine-platinum(II) complexes are effective inhibitors of mammalian topoisomerases and human thioredoxin reductase 1.
J.Inorg.Biochem., 103, 2009
2ZZ0
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BU of 2zz0 by Molmil
Crystal structure of human thioredoxin reductase I (SeCys 498 Cys)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, Thioredoxin reductase 1, ...
Authors:Lo, Y.C, Ko, T.P, Wang, A.H.J.
Deposit date:2009-02-02
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Terpyridine-platinum(II) complexes are effective inhibitors of mammalian topoisomerases and human thioredoxin reductase 1.
J.Inorg.Biochem., 103, 2009
2ZZC
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BU of 2zzc by Molmil
Crystal structure of NADP(H):human thioredoxin reductase I
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thioredoxin reductase 1, ...
Authors:Lo, Y.C, Ko, T.P, Wang, A.H.J.
Deposit date:2009-02-09
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Terpyridine-platinum(II) complexes are effective inhibitors of mammalian topoisomerases and human thioredoxin reductase 1.
J.Inorg.Biochem., 103, 2009
3RNZ
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BU of 3rnz by Molmil
Crystal structure of Bacillus Amyloliquefaciens Pyroglutamyl Peptidase I
Descriptor: Pyrrolidone-carboxylate peptidase
Authors:Lo, Y.-C, Wang, A.H.-J.
Deposit date:2011-04-24
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Terpyridine platinum(II) complexes inhibit cysteine proteases by binding to active-site cysteine.
J.Biomol.Struct.Dyn., 29, 2011
3RO1
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BU of 3ro1 by Molmil
Crystal structure of the complex of the archaeal sulfolobus PTP-fold phosphatase with terpyridine platinum(II)
Descriptor: 2,2':6',2''-TERPYRIDINE PLATINUM(II) Chloride, protein tyrosine phosphatase
Authors:Lo, Y.-C, Wang, A.H.-J.
Deposit date:2011-04-25
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Terpyridine platinum(II) complexes inhibit cysteine proteases by binding to active-site cysteine.
J.Biomol.Struct.Dyn., 29, 2011

 

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