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PDB: 656 results

7TBL
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BU of 7tbl by Molmil
Composite structure of the human nuclear pore complex (NPC) cytoplasmic face generated with a 12A cryo-ET map of the purified HeLa cell NPC
Descriptor: DDX19, ELYS, GLE1, ...
Authors:Bley, C.J, Nie, S, Mobbs, G.W, Petrovic, S, Gres, A.T, Liu, X, Mukherjee, S, Harvey, S, Huber, F.M, Lin, D.H, Brown, B, Tang, A.W, Rundlet, E.J, Correia, A.R, Chen, S, Regmi, S.G, Stevens, T.A, Jette, C.A, Dasso, M, Patke, A, Palazzo, A.F, Kossiakoff, A.A, Hoelz, A.
Deposit date:2021-12-22
Release date:2022-06-22
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (23 Å)
Cite:Architecture of the cytoplasmic face of the nuclear pore.
Science, 376, 2022
3DBQ
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BU of 3dbq by Molmil
Crystal structure of TTK kinase domain
Descriptor: Dual specificity protein kinase TTK
Authors:Wang, W, Yang, Y.T, Gao, Y.F, Zhu, S.C, Wang, F, Old, W, Xu, Q.B, Resing, K, Ahn, N, Lei, M, Liu, X.D.
Deposit date:2008-06-02
Release date:2009-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Mechanistic Insights into Mps1 Kinase Activation
J.CELL.MOL.MED., 13, 2008
6KY5
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BU of 6ky5 by Molmil
Crystal structure of a hydrolase mutant
Descriptor: PET hydrolase, SULFATE ION
Authors:Cui, Y.L, Chen, Y.C, Liu, X.Y, Dong, S.J, Han, J, Xiang, H, Chen, Q, Liu, H.Y, Han, X, Liu, W.D, Tang, S.Y, Wu, B.
Deposit date:2019-09-16
Release date:2020-09-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Computational redesign of PETase for plasticbiodegradation by GRAPE strategy.
Biorxiv, 2020
9EQM
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BU of 9eqm by Molmil
Crystal structure of pVHL:EloB:EloC in complex with MP-1-21
Descriptor: (2S,4R)-1-[(2R)-2-[(1-fluoranylcyclopropyl)carbonylamino]-3-methyl-3-[[trans-4-(morpholin-4-ylmethyl)cyclohexyl]methylsulfanyl]butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Kroupova, A, Pierri, M, Liu, X, Ciulli, A.
Deposit date:2024-03-21
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Stereochemical inversion at a 1,4-cyclohexyl PROTAC linker fine-tunes conformation and binding affinity.
Bioorg.Med.Chem.Lett., 110, 2024
5TQR
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BU of 5tqr by Molmil
ctPRC2 in an autoinhibited conformation bound to S-adenosylmethionine
Descriptor: Histone-lysine N-methyltransferase EZH2, Polycomb protein SUZ12, Polycomb Protein EED, ...
Authors:Bratkowski, M.A, Liu, X.
Deposit date:2016-10-24
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.571 Å)
Cite:Polycomb repressive complex 2 in an autoinhibited state.
J. Biol. Chem., 292, 2017
5ZHP
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BU of 5zhp by Molmil
M3 muscarinic acetylcholine receptor in complex with a selective antagonist
Descriptor: (1R,2R,4S,5S,7s)-7-({[4-fluoro-2-(thiophen-2-yl)phenyl]carbamoyl}oxy)-9,9-dimethyl-3-oxa-9-azatricyclo[3.3.1.0~2,4~]nonan-9-ium, CITRIC ACID, HEXAETHYLENE GLYCOL, ...
Authors:Liu, H, Hofmann, J, Fish, I, Schaake, B, Eitel, K, Bartuschat, A, Kaindl, J, Rampp, H, Banerjee, A, Hubner, H, Clark, M.J, Vincent, S.G, Fisher, J, Heinrich, M, Hirata, K, Liu, X, Sunahara, R.K, Shoichet, B.K, Kobilka, B.K, Gmeiner, P.
Deposit date:2018-03-13
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-guided development of selective M3 muscarinic acetylcholine receptor antagonists
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7TBI
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BU of 7tbi by Molmil
Composite structure of the S. cerevisiae nuclear pore complex (NPC)
Descriptor: Dyn2, Nic96 R1, Nic96 R2, ...
Authors:Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
Deposit date:2021-12-22
Release date:2022-06-15
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (25 Å)
Cite:Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
5VK3
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BU of 5vk3 by Molmil
Apo ctPRC2 with E840A and K852D mutations in Ezh2
Descriptor: Histone-lysine N-methyltransferase EZH2,Polycomb protein SUZ12, Polycomb Protein EED, ZINC ION
Authors:Bratkowski, M.A, Liu, X.
Deposit date:2017-04-20
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.114 Å)
Cite:Polycomb repressive complex 2 in an autoinhibited state.
J. Biol. Chem., 292, 2017
2L8S
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BU of 2l8s by Molmil
Solution NMR Structure of Transmembrane and Cytosolic Regions of Integrin Alpha1 in Detergent Micelles
Descriptor: Integrin alpha-1
Authors:Lai, C, Liu, X, Tian, C.
Deposit date:2011-01-24
Release date:2012-02-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Integrin Alpha1 Has a Long Helix, Extending from the Transmembrane Region to the Cytoplasmic Tail in Detergent Micelles
Plos One, 8, 2013
5WAK
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BU of 5wak by Molmil
Crystal Structure of a Suz12-Rbbp4 Binary Complex
Descriptor: Histone-binding protein RBBP4, Polycomb protein SUZ12, ZINC ION
Authors:Chen, S, Jiao, L, Liu, X.
Deposit date:2017-06-26
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Unique Structural Platforms of Suz12 Dictate Distinct Classes of PRC2 for Chromatin Binding.
Mol. Cell, 69, 2018
2GYY
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BU of 2gyy by Molmil
Structure of aspartate semialdehyde dehydrogenase (ASADH) from Streptococcus pneumoniae
Descriptor: Aspartate beta-semialdehyde dehydrogenase
Authors:Faehnle, C.R, Le Coq, J, Liu, X, Viola, R.E.
Deposit date:2006-05-10
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Examination of key intermediates in the catalytic cycle of aspartate-beta-semialdehyde dehydrogenase from a gram-positive infectious bacteria.
J.Biol.Chem., 281, 2006
7YIK
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BU of 7yik by Molmil
The structure of archaeal nuclease RecJ2 from Methanocaldococcus jannaschii
Descriptor: nuclease RecJ2
Authors:Wang, W.W, Liu, X.P.
Deposit date:2022-07-16
Release date:2023-07-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:The structure of archaeal nuclease RecJ2 from Methanocaldococcus jannaschii
To Be Published
3CXP
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BU of 3cxp by Molmil
Crystal structure of human glucosamine 6-phosphate N-acetyltransferase 1 mutant E156A
Descriptor: CHLORIDE ION, Glucosamine 6-phosphate N-acetyltransferase
Authors:Wang, J, Liu, X, Li, L.-F, Su, X.-D.
Deposit date:2008-04-25
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Acceptor substrate binding revealed by crystal structure of human glucosamine-6-phosphate N-acetyltransferase 1
Febs Lett., 582, 2008
3CXS
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BU of 3cxs by Molmil
Crystal structure of human GNA1
Descriptor: Glucosamine 6-phosphate N-acetyltransferase
Authors:Wang, J, Liu, X, Li, L.-F, Su, X.-D.
Deposit date:2008-04-25
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Acceptor substrate binding revealed by crystal structure of human glucosamine-6-phosphate N-acetyltransferase 1
Febs Lett., 582, 2008
4KP3
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BU of 4kp3 by Molmil
Crystal Structure of MyoVa-GTD in Complex with Two Cargos
Descriptor: Melanophilin, RILP-like protein 2, Unconventional myosin-Va
Authors:Wei, Z, Liu, X, Yu, C, Zhang, M.
Deposit date:2013-05-13
Release date:2013-07-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Structural basis of cargo recognitions for class V myosins
Proc.Natl.Acad.Sci.USA, 110, 2013
3PMR
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BU of 3pmr by Molmil
Crystal Structure of E2 domain of Human Amyloid Precursor-Like Protein 1
Descriptor: Amyloid-like protein 1, PHOSPHATE ION
Authors:Lee, S, Xue, Y, Hu, J, Wang, Y, Liu, X, Demeler, B, Ha, Y.
Deposit date:2010-11-17
Release date:2011-06-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The E2 Domains of APP and APLP1 Share a Conserved Mode of Dimerization.
Biochemistry, 50, 2011
7YOQ
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BU of 7yoq by Molmil
Recj2 and CMP complex from Methanocaldococcus jannaschii
Descriptor: [5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)furan-2-yl]methyl dihydrogen phosphate, nuclease RecJ2
Authors:Wang, W.W, Liu, X.P.
Deposit date:2022-08-02
Release date:2023-08-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.265 Å)
Cite:The structure of nuclease RecJ2 from Methanocaldococcus jannaschii
To Be Published
7YOS
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BU of 7yos by Molmil
Recj2 and Mn complex from Methanocaldococcus jannaschii
Descriptor: MANGANESE (II) ION, nuclease RecJ2
Authors:Wang, W.W, Liu, X.P.
Deposit date:2022-08-02
Release date:2023-08-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:The structure of nuclease RecJ2 from Methanocaldococcus jannaschii
To Be Published
3CXQ
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BU of 3cxq by Molmil
Crystal structure of human glucosamine 6-phosphate N-acetyltransferase 1 bound to GlcN6P
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Glucosamine 6-phosphate N-acetyltransferase
Authors:Wang, J, Liu, X, Li, L.-F, Su, X.-D.
Deposit date:2008-04-25
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Acceptor substrate binding revealed by crystal structure of human glucosamine-6-phosphate N-acetyltransferase 1
Febs Lett., 582, 2008
3EXR
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BU of 3exr by Molmil
Crystal structure of KGPDC from Streptococcus mutans
Descriptor: RmpD (Hexulose-6-phosphate synthase)
Authors:Li, G.L, Liu, X, Li, L.F, Su, X.D.
Deposit date:2008-10-16
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009
3R5T
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BU of 3r5t by Molmil
Crystal structure of holo-ViuP
Descriptor: (4S,5R)-N-{3-[(2,3-dihydroxybenzoyl)amino]propyl}-2-(2,3-dihydroxyphenyl)-N-[3-({[(4S,5R)-2-(2,3-dihydroxyphenyl)-5-met hyl-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)propyl]-5-methyl-4,5-dihydro-1,3-oxazole-4-carboxamide, 1,2-ETHANEDIOL, ACETIC ACID, ...
Authors:Li, N, Zhang, C, Li, B, Liu, X, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-03-19
Release date:2012-02-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.
J.Biol.Chem., 287, 2012
6A6O
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BU of 6a6o by Molmil
Crystal structure of acetyl ester-xyloside bifunctional hydrolase from Caldicellulosiruptor lactoaceticus
Descriptor: Esterase/lipase-like protein
Authors:Cao, H, Huang, Y, Sun, L.C, Liu, X, Liu, T.F, Wang, F.Z, Xin, F.J.
Deposit date:2018-06-28
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights into the Dual-Substrate Recognition and Catalytic Mechanisms of a Bifunctional Acetyl Ester-Xyloside Hydrolase from Caldicellulosiruptor lactoaceticus.
Acs Catalysis, 9, 2019
3R5S
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BU of 3r5s by Molmil
Crystal structure of apo-ViuP
Descriptor: Ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding protein
Authors:Li, N, Zhang, C, Li, B, Liu, X, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-03-19
Release date:2012-02-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.
J.Biol.Chem., 287, 2012
2GZ1
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BU of 2gz1 by Molmil
Structure of Aspartate Semialdehyde Dehydrogenase (ASADH) from Streptococcus pneumoniae complexed with NADP
Descriptor: Aspartate beta-semialdehyde dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Faehnle, C.R, Le Coq, J, Liu, X, Viola, R.E.
Deposit date:2006-05-10
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Examination of key intermediates in the catalytic cycle of aspartate-beta-semialdehyde dehydrogenase from a gram-positive infectious bacteria.
J.Biol.Chem., 281, 2006
3EXS
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BU of 3exs by Molmil
Crystal structure of KGPDC from Streptococcus mutans in complex with D-R5P
Descriptor: RIBULOSE-5-PHOSPHATE, RmpD (Hexulose-6-phosphate synthase)
Authors:Li, G.L, Liu, X, Wang, K.T, Li, L.F, Su, X.D.
Deposit date:2008-10-17
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009

226707

数据于2024-10-30公开中

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