Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 487 results

8H89
DownloadVisualize
BU of 8h89 by Molmil
Capsid of Ralstonia phage GP4
Descriptor: Major capsid protein, Virion associated protein
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2022-10-22
Release date:2022-11-16
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A Capsid Structure of Ralstonia solanacearum podoviridae GP4 with a Triangulation Number T = 9.
Viruses, 14, 2022
8PMD
DownloadVisualize
BU of 8pmd by Molmil
Nucleotide-bound BSEP in nanodiscs
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Bile salt export pump, MAGNESIUM ION
Authors:Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
Deposit date:2023-06-28
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
3IZO
DownloadVisualize
BU of 3izo by Molmil
Model of the fiber tail and its interactions with the penton base of human adenovirus by cryo-electron microscopy
Descriptor: Fiber, Penton protein
Authors:Liu, H.
Deposit date:2010-11-05
Release date:2011-01-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Model of the Trimeric Fiber and Its Interactions with the Pentameric Penton Base of Human Adenovirus by Cryo-electron Microscopy.
J.Mol.Biol., 406, 2011
8J18
DownloadVisualize
BU of 8j18 by Molmil
Cryo-EM structure of the 3-OH-C12-bound GPR84 receptor-Gi complex
Descriptor: (3R)-3-HYDROXYDODECANOIC ACID, Antibody fragment ScFv16, G-protein coupled receptor 84, ...
Authors:Liu, H, Yin, W, Xu, H.E.
Deposit date:2023-04-12
Release date:2023-06-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structural insights into ligand recognition and activation of the medium-chain fatty acid-sensing receptor GPR84.
Nat Commun, 14, 2023
8J1A
DownloadVisualize
BU of 8j1a by Molmil
Cryo-EM structure of the GPR84 receptor-Gi complex with no ligand modeled
Descriptor: Antibody fragment ScFv16, G-protein coupled receptor 84, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Liu, H, Yin, W, Xu, H.E.
Deposit date:2023-04-12
Release date:2023-06-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structural insights into ligand recognition and activation of the medium-chain fatty acid-sensing receptor GPR84.
Nat Commun, 14, 2023
8J19
DownloadVisualize
BU of 8j19 by Molmil
Cryo-EM structure of the LY237-bound GPR84 receptor-Gi complex
Descriptor: 6-nonylpyridine-2,4-diol, Antibody fragment ScFv16, G-protein coupled receptor 84, ...
Authors:Liu, H, Yin, W, Xu, H.E.
Deposit date:2023-04-12
Release date:2023-06-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural insights into ligand recognition and activation of the medium-chain fatty acid-sensing receptor GPR84.
Nat Commun, 14, 2023
8SIR
DownloadVisualize
BU of 8sir by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC25.54 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CC25.54 Fab heavy chain, CC25.54 Fab light chain, ...
Authors:Liu, H, Wilson, I.A.
Deposit date:2023-04-16
Release date:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Broadly neutralizing antibodies targeting a conserved silent face of spike RBD resist extreme SARS-CoV-2 antigenic drift
Biorxiv, 2023
8SIQ
DownloadVisualize
BU of 8siq by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibodies CC25.36 and CV38-142 Fab
Descriptor: CC25.36 Fab heavy chain, CC25.36 Fab light chain, CV38-142 Fab heavy chain, ...
Authors:Liu, H, Wilson, I.A.
Deposit date:2023-04-16
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Broadly neutralizing antibodies targeting a conserved silent face of spike RBD resist extreme SARS-CoV-2 antigenic drift
Biorxiv, 2023
8CWV
DownloadVisualize
BU of 8cwv by Molmil
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a cross-neutralizing nanobody 2-31 and a human antibody CC12.1 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CC12.1 Fab heavy chain, CC12.1 Fab light chain, ...
Authors:Liu, H, Wilson, I.A.
Deposit date:2022-05-19
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Superimmunity by pan-sarbecovirus nanobodies.
Cell Rep, 39, 2022
8DGV
DownloadVisualize
BU of 8dgv by Molmil
Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC99.103 isolated from a vaccinated COVID-19 convalescent
Descriptor: Antibody CC99.103 Fab heavy chain, Antibody CC99.103 Fab light chain, Spike protein S2'
Authors:Liu, H, Wilson, I.A.
Deposit date:2022-06-24
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease.
Immunity, 56, 2023
3MJK
DownloadVisualize
BU of 3mjk by Molmil
Structure of a growth factor precursor
Descriptor: Platelet-derived growth factor subunit A
Authors:Liu, H, He, X.
Deposit date:2010-04-12
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of a platelet-derived growth factor/propeptide complex and a platelet-derived growth factor/receptor complex.
Proc.Natl.Acad.Sci.USA, 107, 2010
5XM8
DownloadVisualize
BU of 5xm8 by Molmil
Crystal structure of AsfvPolX in complex with DNA enzyme and Pb.
Descriptor: DNA (23-mer), DNA (36-MER), LEAD (II) ION, ...
Authors:Liu, H.H, Gan, J.H.
Deposit date:2017-05-13
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of an RNA-cleaving DNAzyme.
Nat Commun, 8, 2017
5XM9
DownloadVisualize
BU of 5xm9 by Molmil
Crystal structure of AsfvPolX in complex with DNA enzyme.
Descriptor: DNA (23-mer), DNA (36-MER), Repair DNA polymerase X
Authors:Liu, H.H, Gan, J.H.
Deposit date:2017-05-13
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.053 Å)
Cite:Crystal structure of an RNA-cleaving DNAzyme.
Nat Commun, 8, 2017
7T7B
DownloadVisualize
BU of 7t7b by Molmil
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a cross-neutralizing antibody ADI-62113 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ADI-62113 Fab heavy chain, ADI-62113 Fab light chain, ...
Authors:Liu, H, Wilson, I.A.
Deposit date:2021-12-14
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Human antibodies to SARS-CoV-2 with a recurring YYDRxG motif retain binding and neutralization to variants of concern including Omicron.
Commun Biol, 5, 2022
3CYV
DownloadVisualize
BU of 3cyv by Molmil
Crystal structure of uroporphyrinogen decarboxylase from Shigella flexineri: new insights into its catalytic mechanism
Descriptor: Uroporphyrinogen decarboxylase
Authors:Liu, H, Zhou, H, Bi, R.
Deposit date:2008-04-26
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of uroporphyrinogen III decarboxylase from Shigella flexineri: new insights into its catalytic mechanism
To be Published
5XNP
DownloadVisualize
BU of 5xnp by Molmil
Crystal structures of human SALM5 in complex with human PTPdelta
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Liu, H, Lin, Z, Xu, F.
Deposit date:2017-05-24
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.729 Å)
Cite:Structural basis of SALM5-induced PTP delta dimerization for synaptic differentiation
Nat Commun, 9, 2018
5XNQ
DownloadVisualize
BU of 5xnq by Molmil
Crystal structures of human SALM5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Liu, H, Lin, Z, Xu, F.
Deposit date:2017-05-24
Release date:2018-01-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structural basis of SALM5-induced PTP delta dimerization for synaptic differentiation
Nat Commun, 9, 2018
4EXP
DownloadVisualize
BU of 4exp by Molmil
Structure of mouse Interleukin-34 in complex with mouse FMS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-34, Macrophage colony-stimulating factor 1 receptor
Authors:Liu, H, Leo, C, Chen, X, Wong, B.R, Williams, L.T, Lin, H, He, X.
Deposit date:2012-04-30
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The mechanism of shared but distinct CSF-1R signaling by the non-homologous cytokines IL-34 and CSF-1.
Biochim.Biophys.Acta, 1824, 2012
4FI1
DownloadVisualize
BU of 4fi1 by Molmil
Crystal structure of scCK2 alpha in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Casein kinase II subunit alpha, MAGNESIUM ION, ...
Authors:Liu, H, Wang, H, Teng, M, Li, X.
Deposit date:2012-06-07
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of scCK2 alpha in complex with ATP
To be Published
3U06
DownloadVisualize
BU of 3u06 by Molmil
Crystal structure of the kinesin-14 NcdG347D
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Liu, H.-L, Pemble IV, C.W, Endow, S.A.
Deposit date:2011-09-28
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Neck-motor interactions trigger rotation of the kinesin stalk.
Sci Rep, 2, 2012
8CWU
DownloadVisualize
BU of 8cwu by Molmil
Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a cross-neutralizing nanobody 1-21
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, VHH 1-21
Authors:Liu, H, Wilson, I.A.
Deposit date:2022-05-19
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Superimmunity by pan-sarbecovirus nanobodies.
Cell Rep, 39, 2022
8HQ1
DownloadVisualize
BU of 8hq1 by Molmil
Crystal Structure Of Human Lgi1-Adam22 Complex In Space Group C2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 22, ...
Authors:Liu, H.L, Lin, Z.H, Xu, F.
Deposit date:2022-12-13
Release date:2023-12-13
Method:X-RAY DIFFRACTION (4.17 Å)
Cite:Structure Of Human Lgi1-Adam22 Complex In Space Group C2
To Be Published
4EXN
DownloadVisualize
BU of 4exn by Molmil
Crystal structure of mouse Interleukin-34
Descriptor: Interleukin-34, alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, H, Leo, C, Chen, X, Wong, B.R, Williams, L.T, Lin, H, He, X.
Deposit date:2012-04-30
Release date:2012-05-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The mechanism of shared but distinct CSF-1R signaling by the non-homologous cytokines IL-34 and CSF-1.
Biochim.Biophys.Acta, 1824, 2012
3G5C
DownloadVisualize
BU of 3g5c by Molmil
Structural and biochemical studies on the ectodomain of human ADAM22
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADAM 22, CALCIUM ION
Authors:Liu, H, Shim, A, Chen, X, He, X.
Deposit date:2009-02-04
Release date:2009-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural and biochemical studies on the ectodomain of human ADAM22
J.Biol.Chem., 2009
2O26
DownloadVisualize
BU of 2o26 by Molmil
Structure of a class III RTK signaling assembly
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Kit ligand, Mast/stem cell growth factor receptor, ...
Authors:Liu, H, Chen, X, Focia, P.J, He, X.
Deposit date:2006-11-29
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for stem cell factor-KIT signaling and activation of class III receptor tyrosine kinases.
Embo J., 26, 2007

220472

건을2024-05-29부터공개중

PDB statisticsPDBj update infoContact PDBjnumon