Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 465 results

6K7S
DownloadVisualize
BU of 6k7s by Molmil
Crystal structure of thymidylate synthase from shrimp
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, TOMUDEX, Thymidylate synthase
Authors:Ma, Q, Zang, K, Liu, C.
Deposit date:2019-06-08
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural analysis of a shrimp thymidylate synthase reveals species-specific interactions with dUMP and raltitrexed.
J Oceanol Limnol, 38, 2020
7V9G
DownloadVisualize
BU of 7v9g by Molmil
Native BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*TP*GP*C)-3')
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7VZF
DownloadVisualize
BU of 7vzf by Molmil
Cryo-EM structure of amyloid fibril formed by full-length human SOD1
Descriptor: Superoxide dismutase [Cu-Zn]
Authors:Wang, L.Q, Ma, Y.Y, Yuan, H.Y, Zhao, K, Zhang, M.Y, Wang, Q, Huang, X, Xu, W.C, Chen, J, Li, D, Zhang, D.L, Zou, L.Y, Yin, P, Liu, C, Liang, Y.
Deposit date:2021-11-16
Release date:2022-06-29
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-EM structure of an amyloid fibril formed by full-length human SOD1 reveals its conformational conversion.
Nat Commun, 13, 2022
7W92
DownloadVisualize
BU of 7w92 by Molmil
Open state of SARS-CoV-2 Delta variant spike protein
Descriptor: Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7W9E
DownloadVisualize
BU of 7w9e by Molmil
SARS-CoV-2 Delta S-8D3
Descriptor: Anti-H5N1 hemagglutinin monoclonal anitbody H5M9 heavy chain, Spike glycoprotein, The light chain of 8D3 fab
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7W99
DownloadVisualize
BU of 7w99 by Molmil
SARS-CoV-2 Delta S-ACE2-C2a
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7W94
DownloadVisualize
BU of 7w94 by Molmil
Transition state of SARS-CoV-2 Delta variant spike protein
Descriptor: Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7W9C
DownloadVisualize
BU of 7w9c by Molmil
SARS-CoV-2 Delta S-ACE2-C3
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7W98
DownloadVisualize
BU of 7w98 by Molmil
SARS-CoV-2 Delta S-ACE2-C1
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7W9B
DownloadVisualize
BU of 7w9b by Molmil
SARS-CoV-2 Delta S-ACE2-C2b
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7W9F
DownloadVisualize
BU of 7w9f by Molmil
SARS-CoV-2 Delta S-RBD-8D3
Descriptor: Spike protein S1, The heavy chain of 8D3, The light chain of 8D3
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
6JL1
DownloadVisualize
BU of 6jl1 by Molmil
Crystal structure of VvPlpA G389D from Vibrio vulnificus
Descriptor: Thermolabile hemolysin
Authors:Ma, Q, Wan, Y, Liu, C.
Deposit date:2019-03-03
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural analysis of aVibriophospholipase reveals an unusual Ser-His-chloride catalytic triad.
J.Biol.Chem., 294, 2019
7XYK
DownloadVisualize
BU of 7xyk by Molmil
Structure of WSSV thymidylate synthase in complex with dUMP and raltitrexed
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, SULFATE ION, TOMUDEX, ...
Authors:Ma, Q, Liu, C, Zang, K.
Deposit date:2022-06-01
Release date:2023-06-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.433 Å)
Cite:Structure of WSSV thymidylate synthase in complex with dUMP and raltitrexed
To Be Published
7X6L
DownloadVisualize
BU of 7x6l by Molmil
Cryo-EM structure of H3 hemagglutinin from A/HongKong/01/1968 in complex with a neutralizing antibody 28-12
Descriptor: Heavy chain of antibody 12 fab, Hemagglutinin, The light chain of the antibody 12 fab
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-03-07
Release date:2022-03-23
Last modified:2022-06-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Unique binding pattern for a lineage of human antibodies with broad reactivity against influenza A virus.
Nat Commun, 13, 2022
7X6O
DownloadVisualize
BU of 7x6o by Molmil
Cryo-EM structure of H1 hemagglutinin from A/Washington/05/2011 in complex with a neutralizing antibody 28-12
Descriptor: Heavy chain of antibody 12 fab, Hemagglutinin, The light chain of antibody 12 fab
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-03-07
Release date:2022-03-23
Last modified:2022-06-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Unique binding pattern for a lineage of human antibodies with broad reactivity against influenza A virus.
Nat Commun, 13, 2022
6KZ3
DownloadVisualize
BU of 6kz3 by Molmil
YebT domain1-4
Descriptor: Intermembrane transport protein YebT
Authors:Wang, H.W, Liu, C, Zhang, L.
Deposit date:2019-09-23
Release date:2020-01-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM Structure of a Bacterial Lipid Transporter YebT.
J.Mol.Biol., 432, 2020
7VQQ
DownloadVisualize
BU of 7vqq by Molmil
Cryo-EM structure of amyloid fibril formed by FUS low complexity domain
Descriptor: fusion protein of mCerulean and FUS LCD
Authors:Sun, Y.P, Xia, W.C, Liu, C.
Deposit date:2021-10-20
Release date:2021-12-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular structure of an amyloid fibril formed by FUS low-complexity domain.
Iscience, 25, 2022
7V9I
DownloadVisualize
BU of 7v9i by Molmil
The Monomer mutant of BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, DNA (5'-D(*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*T)-3')
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9F
DownloadVisualize
BU of 7v9f by Molmil
Selenomethionine mutant (L740Sem) of BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, CITRIC ACID, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), ...
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2022-03-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7W9I
DownloadVisualize
BU of 7w9i by Molmil
SARS-CoV-2 Delta S-RBD-ACE2
Descriptor: Angiotensin-converting enzyme 2, Spike protein S1
Authors:Cong, Y, Liu, C.X.
Deposit date:2021-12-09
Release date:2022-01-12
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for SARS-CoV-2 Delta variant recognition of ACE2 receptor and broadly neutralizing antibodies.
Nat Commun, 13, 2022
7XJM
DownloadVisualize
BU of 7xjm by Molmil
Structure of VcPotD1 in complex with spermidine
Descriptor: HEXAETHYLENE GLYCOL, Putrescine-binding periplasmic protein, SPERMIDINE, ...
Authors:Ma, Q, Liu, C.
Deposit date:2022-04-18
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:structure of VcPotD1 in complex with spermidine
To Be Published
7XJN
DownloadVisualize
BU of 7xjn by Molmil
Structure of VcPotD1 in complex with norspermidine
Descriptor: HEXAETHYLENE GLYCOL, N-(3-aminopropyl)propane-1,3-diamine, Putrescine-binding periplasmic protein, ...
Authors:Ma, Q, Liu, C.
Deposit date:2022-04-18
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure of VcPotD1 in complex with norspermidine
To Be Published
8JP3
DownloadVisualize
BU of 8jp3 by Molmil
FCP trimer in diatom Thalassiosira pseudonana
Descriptor: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, CHLOROPHYLL A, ...
Authors:Feng, Y, Li, Z, Zhou, C.C, Liu, C, Shen, J.R, Wang, W.
Deposit date:2023-06-10
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:FCP trimer in diatom Thalassiosira pseudonana
To Be Published
7XLZ
DownloadVisualize
BU of 7xlz by Molmil
Structure of siderophore-interacting protein from Vibrio anguillarum
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Siderophore-interacting protein
Authors:Ma, Q, Liu, C, Han, Y.
Deposit date:2022-04-23
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Structure of siderophore-interacting protein from Vibrio anguillarum
To Be Published
6KJ4
DownloadVisualize
BU of 6kj4 by Molmil
120kV MicroED structure of FUS (37-42) SYSGYS solved from single crystal at 0.65 A
Descriptor: RNA-binding protein FUS
Authors:Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
Deposit date:2019-07-20
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON CRYSTALLOGRAPHY (0.65 Å)
Cite:Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon