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PDB: 86 results

5F3R
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BU of 5f3r by Molmil
Structure of oxidized UDP-galactopyranose mutase from Mycobacterium smegmatis in complex with magnesium ion
Descriptor: DIMETHYL SULFOXIDE, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Wangkanont, K, Kiessling, L.L, Forest, K.T.
Deposit date:2015-12-03
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural dynamics of UDP-galactopyranose mutase from Mycobacterium smegmatis
to be published
6D99
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BU of 6d99 by Molmil
Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GalNAc (open, oxidized)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, ISOPROPYL ALCOHOL, SODIUM ION, ...
Authors:Wangkanont, K, Kiessling, L.L, Forest, K.T.
Deposit date:2018-04-28
Release date:2019-05-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Substrate recognition by FAD in UDP-galactopyranose mutase
To be published
6D9A
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BU of 6d9a by Molmil
Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GalNAc (open, reduced)
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, ISOPROPYL ALCOHOL, SODIUM ION, ...
Authors:Wangkanont, K, Kiessling, L.L, Forest, K.T.
Deposit date:2018-04-28
Release date:2019-05-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Substrate recognition by FAD in UDP-galactopyranose mutase
To be published
3MMJ
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BU of 3mmj by Molmil
Structure of the PTP-like phytase from Selenomonas ruminantium in complex with myo-inositol hexakisphosphate
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2010-04-20
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate binding in protein-tyrosine phosphatase-like inositol polyphosphatases.
J.Biol.Chem., 287, 2012
3MOZ
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BU of 3moz by Molmil
Structure of the PTP-like phytase from Selenomonas ruminantium in complex with myo-inositol (1,2,3,5,6)pentakisphosphate
Descriptor: (1R,2R,3R,4R,5S,6S)-6-HYDROXYCYCLOHEXANE-1,2,3,4,5-PENTAYL PENTAKIS[DIHYDROGEN (PHOSPHATE)], ACETATE ION, CHLORIDE ION, ...
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2010-04-23
Release date:2011-06-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate binding in protein-tyrosine phosphatase-like inositol polyphosphatases.
J.Biol.Chem., 287, 2012
4XAD
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BU of 4xad by Molmil
Crystal structure of hen egg white lysozyme in complex with Galf-GlcNAc
Descriptor: CHLORIDE ION, Lysozyme C, beta-D-galactofuranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Wangkanont, K, Kiessling, L.L.
Deposit date:2014-12-14
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of hen egg white lysozyme in complex with Galf-GlcNAc, an O-linked disaccharide core from Trypanosoma cruzi
to be published
4XJJ
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BU of 4xjj by Molmil
Extracellular domain of type II Transforming Growth Factor Beta receptor in complex with 2-(2-Hydroxyethyl)NDSB-201
Descriptor: 3-[2-(2-hydroxyethyl)pyridinium-1-yl]propane-1-sulfonate, TGF-beta receptor type-2
Authors:Wangkanont, K, Forest, K.T, Kiessling, L.L.
Deposit date:2015-01-08
Release date:2015-06-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Extracellular domain of type II Transforming Growth Factor Beta receptor in complex with 2-(2-Hydroxyethyl)NDSB-201
to be published
3GF4
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BU of 3gf4 by Molmil
Structure of UDP-galactopyranose mutase bound to UDP-glucose
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, UDP-galactopyranose mutase, URIDINE-5'-DIPHOSPHATE-GLUCOSE, ...
Authors:Gruber, T.D, Borrok, M.J, Kiessling, L.L, Forest, K.T.
Deposit date:2009-02-26
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Ligand binding and substrate discrimination by UDP-galactopyranose mutase.
J.Mol.Biol., 391, 2009
4KSI
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BU of 4ksi by Molmil
Crystal Structure Analysis of the Acidic Leucine Aminopeptidase of Tomato
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:DuPrez, K.T, Scranton, M, Walling, L, Fan, L.
Deposit date:2013-05-17
Release date:2013-06-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of tomato wound-induced leucine aminopeptidase sheds light on substrate specificity.
Acta Crystallogr.,Sect.D, 70, 2014
3INT
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BU of 3int by Molmil
Structure of UDP-galactopyranose mutase bound to UDP-galactose (reduced)
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GALACTOSE-URIDINE-5'-DIPHOSPHATE, Probable UDP-galactopyranose mutase, ...
Authors:Gruber, T.D, Kiessling, L.L, Forest, K.T.
Deposit date:2009-08-12
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:X-ray crystallography reveals a reduced substrate complex of UDP-galactopyranose mutase poised for covalent catalysis by flavin .
Biochemistry, 48, 2009
3INR
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BU of 3inr by Molmil
Structure of UDP-galactopyranose mutase bound to UDP-galactose (oxidized)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GALACTOSE-URIDINE-5'-DIPHOSPHATE, UDP-galactopyranose mutase
Authors:Gruber, T.D, Kiessling, L.L, Forest, K.T.
Deposit date:2009-08-12
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystallography reveals a reduced substrate complex of UDP-galactopyranose mutase poised for covalent catalysis by flavin .
Biochemistry, 48, 2009
3F41
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BU of 3f41 by Molmil
Structure of the tandemly repeated protein tyrosine phosphatase like phytase from Mitsuokella multacida
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, Phytase
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2008-10-31
Release date:2009-06-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of a multifunctional, tandemly repeated inositol polyphosphatase.
J.Mol.Biol., 392, 2009
7JN7
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BU of 7jn7 by Molmil
Human DPP9-CARD8 complex
Descriptor: Caspase recruitment domain-containing protein 8, Dipeptidyl peptidase 9, [(2~{R})-1-[(2~{R})-2-azanyl-3-methyl-butanoyl]pyrrolidin-2-yl]boronic acid
Authors:Sharif, H, Hollingsworth, L.R.
Deposit date:2020-08-04
Release date:2021-05-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Dipeptidyl peptidase 9 sets a threshold for CARD8 inflammasome formation by sequestering its active C-terminal fragment.
Immunity, 54, 2021
7JKQ
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BU of 7jkq by Molmil
Human DPP9-CARD8 complex
Descriptor: Caspase recruitment domain-containing protein 8, Dipeptidyl peptidase 9
Authors:Sharif, H, Hollingsworth, L.R.
Deposit date:2020-07-28
Release date:2021-05-26
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Dipeptidyl peptidase 9 sets a threshold for CARD8 inflammasome formation by sequestering its active C-terminal fragment.
Immunity, 54, 2021
3D1O
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BU of 3d1o by Molmil
Structure of the PTP-Like Phytase Expressed by Selenomonas Ruminantium at an Ionic Strength of 300 mM
Descriptor: CHLORIDE ION, GLYCEROL, Myo-inositol hexaphosphate phosphohydrolase
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2008-05-06
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Effect of ionic strength and oxidation on the P-loop conformation of the protein tyrosine phosphatase-like phytase, PhyAsr.
Febs J., 275, 2008
3D1H
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BU of 3d1h by Molmil
Structure of the PTP-Like Phytase Expressed by Selenomonas Ruminantium at an Ionic Strength of 500 mM
Descriptor: GLYCEROL, Myo-inositol hexaphosphate phosphohydrolase
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2008-05-05
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Effect of ionic strength and oxidation on the P-loop conformation of the protein tyrosine phosphatase-like phytase, PhyAsr.
Febs J., 275, 2008
4POG
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BU of 4pog by Molmil
MCM-ssDNA co-crystal structure
Descriptor: 30-mer oligo(dT), Cell division control protein 21, ZINC ION
Authors:Froelich, C.A, Kang, S, Epling, L.B, Bell, S.P, Enemark, E.J.
Deposit date:2014-02-25
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.203 Å)
Cite:A conserved MCM single-stranded DNA binding element is essential for replication initiation.
Elife, 3, 2014
3D1Q
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BU of 3d1q by Molmil
Structure of the PTP-Like Phytase Expressed by Selenomonas Ruminantium at an Ionic Strength of 400 mM
Descriptor: CHLORIDE ION, GLYCEROL, Myo-inositol hexaphosphate phosphohydrolase
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2008-05-06
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Effect of ionic strength and oxidation on the P-loop conformation of the protein tyrosine phosphatase-like phytase, PhyAsr.
Febs J., 275, 2008
4POF
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BU of 4pof by Molmil
PfMCM N-terminal domain without DNA
Descriptor: Cell division control protein 21, ZINC ION
Authors:Froelich, C.A, Kang, S, Epling, L.B, Bell, S.P, Enemark, E.J.
Deposit date:2014-02-25
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.648 Å)
Cite:A conserved MCM single-stranded DNA binding element is essential for replication initiation.
Elife, 3, 2014
6USC
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BU of 6usc by Molmil
Structure of Human Intelectin-1 in complex with KO
Descriptor: CALCIUM ION, CHLORIDE ION, Intelectin-1, ...
Authors:Windsor, I.W, Isabella, C.R, Kosma, P, Raines, R.T, Kiessling, L.L.
Deposit date:2019-10-25
Release date:2020-01-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Stereoelectronic Effects Impact Glycan Recognition.
J.Am.Chem.Soc., 142, 2020
4QCJ
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BU of 4qcj by Molmil
Crystal Structure of OdhI from Corynebacterium glutamicum
Descriptor: Oxoglutarate dehydrogenase inhibitor
Authors:Labahn, J, Raasch, K, Eggeling, L, Bocola, M, Leitner, A, Bott, M.
Deposit date:2014-05-12
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interaction of 2-oxoglutarate dehydrogenase OdhA with its inhibitor OdhI in Corynebacterium glutamicum: Mutants and a model.
J.Biotechnol., 191, 2014
2QMT
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BU of 2qmt by Molmil
Crystal Polymorphism of Protein GB1 Examined by Solid-state NMR and X-ray Diffraction
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, ISOPROPYL ALCOHOL, Immunoglobulin G-binding protein G, ...
Authors:Frericks Schmidt, H.L, Sperling, L.J, Gao, Y.G, Wylie, B.J, Boettcher, J.M, Wilson, S.R, Rienstra, C.M.
Deposit date:2007-07-16
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Crystal Polymorphism of Protein GB1 Examined by Solid-State NMR Spectroscopy and X-ray Diffraction.
J.Phys.Chem.B, 111, 2007
2FW0
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BU of 2fw0 by Molmil
Apo Open Form of Glucose/Galactose Binding Protein
Descriptor: CALCIUM ION, CITRIC ACID, D-galactose-binding periplasmic protein, ...
Authors:Borrok, M.J, Kiessling, L.L, Forest, K.T.
Deposit date:2006-01-31
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Conformational changes of glucose/galactose-binding protein illuminated by open, unliganded, and ultra-high-resolution ligand-bound structures.
Protein Sci., 16, 2007
2FVY
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BU of 2fvy by Molmil
High Resolution Glucose Bound Crystal Structure of GGBP
Descriptor: ACETATE ION, CALCIUM ION, CARBON DIOXIDE, ...
Authors:Borrok, M.J, Kiessling, L.L, Forest, K.T.
Deposit date:2006-01-31
Release date:2007-02-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Conformational changes of glucose/galactose-binding protein illuminated by open, unliganded, and ultra-high-resolution ligand-bound structures.
Protein Sci., 16, 2007
2QW1
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BU of 2qw1 by Molmil
Glucose/galactose binding protein bound to 3-O-methyl D-glucose
Descriptor: 3-O-methyl-beta-D-glucopyranose, CALCIUM ION, D-galactose-binding periplasmic protein, ...
Authors:Borrok, M.J, Kiessling, L.L, Forest, K.T.
Deposit date:2007-08-09
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based design of a periplasmic binding protein antagonist that prevents domain closure.
Acs Chem.Biol., 4, 2009

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