Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 458 results

1KOF
DownloadVisualize
BU of 1kof by Molmil
Crystal structure of gluconate kinase
Descriptor: Gluconate kinase, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-20
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
1KO5
DownloadVisualize
BU of 1ko5 by Molmil
Crystal structure of gluconate kinase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Gluconate kinase, MAGNESIUM ION
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-20
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
1KO8
DownloadVisualize
BU of 1ko8 by Molmil
Crystal structure of gluconate kinase
Descriptor: 6-PHOSPHOGLUCONIC ACID, Gluconate kinase, MAGNESIUM ION
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-20
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
1KNQ
DownloadVisualize
BU of 1knq by Molmil
Crystal structure of gluconate kinase
Descriptor: CHLORIDE ION, Gluconate kinase
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-19
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
6T6P
DownloadVisualize
BU of 6t6p by Molmil
Crystal structure of Klebsiella pneumoniae FabG2(NADH-dependent) at 1.57 A resolution
Descriptor: 3-oxoacyl-[acyl-carrier protein] reductase, GLYCEROL, PHOSPHATE ION
Authors:Vella, P, Schnell, R, Lindqvist, Y, Schneider, G.
Deposit date:2019-10-18
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:A FabG inhibitor targeting an allosteric binding site inhibits several orthologs from Gram-negative ESKAPE pathogens.
Bioorg.Med.Chem., 30, 2021
3KNG
DownloadVisualize
BU of 3kng by Molmil
Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, determined to 1.9 resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
Authors:Koskiniemi, H, Grocholski, T, Lindqvist, Y, Mantsala, P, Niemi, J, Schneider, G.
Deposit date:2009-11-12
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the cofactor-independent monooxygenase SnoaB from Streptomyces nogalater: implications for the reaction mechanism
Biochemistry, 49, 2010
1KAS
DownloadVisualize
BU of 1kas by Molmil
BETA-KETOACYL-ACP SYNTHASE II FROM ESCHERICHIA COLI
Descriptor: BETA-KETOACYL ACP SYNTHASE II
Authors:Huang, W, Jia, J, Edwards, P, Dehesh, K, Schneider, G, Lindqvist, Y.
Deposit date:1997-12-22
Release date:1999-03-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of beta-ketoacyl-acyl carrier protein synthase II from E.coli reveals the molecular architecture of condensing enzymes.
EMBO J., 17, 1998
1KO1
DownloadVisualize
BU of 1ko1 by Molmil
Crystal structure of gluconate kinase
Descriptor: CHLORIDE ION, Gluconate kinase
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-20
Release date:2002-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
2CND
DownloadVisualize
BU of 2cnd by Molmil
STRUCTURAL STUDIES ON CORN NITRATE REDUCTASE: REFINED STRUCTURE OF THE CYTOCHROME B REDUCTASE FRAGMENT AT 2.5 ANGSTROMS, ITS ADP COMPLEX AND AN ACTIVE SITE MUTANT AND MODELING OF THE CYTOCHROME B DOMAIN
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH-DEPENDENT NITRATE REDUCTASE
Authors:Lu, G, Lindqvist, Y, Schneider, G.
Deposit date:1995-02-01
Release date:1995-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural studies on corn nitrate reductase: refined structure of the cytochrome b reductase fragment at 2.5 A, its ADP complex and an active-site mutant and modeling of the cytochrome b domain.
J.Mol.Biol., 248, 1995
1ZJ8
DownloadVisualize
BU of 1zj8 by Molmil
Structure of Mycobacterium tuberculosis NirA protein
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, Probable ferredoxin-dependent nitrite reductase NirA, ...
Authors:Schnell, R, Sandalova, T, Hellman, U, Lindqvist, Y, Schneider, G, Structural Proteomics in Europe (SPINE)
Deposit date:2005-04-28
Release date:2005-05-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Siroheme- and [Fe4-S4]-dependent NirA from Mycobacterium tuberculosis Is a Sulfite Reductase with a Covalent Cys-Tyr Bond in the Active Site
J.Biol.Chem., 280, 2005
1ZJ9
DownloadVisualize
BU of 1zj9 by Molmil
Structure of Mycobacterium tuberculosis NirA protein
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, Probable ferredoxin-dependent nitrite reductase NirA, ...
Authors:Schnell, R, Sandalova, T, Hellman, U, Lindqvist, Y, Schneider, G.
Deposit date:2005-04-28
Release date:2005-05-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Siroheme- and [Fe4-S4]-dependent NirA from Mycobacterium tuberculosis Is a Sulfite Reductase with a Covalent Cys-Tyr Bond in the Active Site
J.Biol.Chem., 280, 2005
1KO4
DownloadVisualize
BU of 1ko4 by Molmil
Crystal structure of gluconate kinase
Descriptor: CHLORIDE ION, Gluconate kinase
Authors:Kraft, L, Sprenger, G.A, Lindqvist, Y.
Deposit date:2001-12-20
Release date:2002-05-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
J.Mol.Biol., 318, 2002
1H7X
DownloadVisualize
BU of 1h7x by Molmil
Dihydropyrimidine dehydrogenase (DPD) from pig, ternary complex of a mutant enzyme (C671A), NADPH and 5-fluorouracil
Descriptor: 5-FLUOROURACIL, DIHYDROPYRIMIDINE DEHYDROGENASE, FLAVIN MONONUCLEOTIDE, ...
Authors:Dobritzsch, D, Schneider, G, Schnackerz, K.D, Lindqvist, Y.
Deposit date:2001-01-19
Release date:2001-02-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of Dihydropyrimidine Dehydrogenase, a Major Determinant of the Pharmacokinetics of the Anti-Cancer Drug 5-Fluorouracil
Embo J., 20, 2001
1DAM
DownloadVisualize
BU of 1dam by Molmil
DETHIOBIOTIN SYNTHETASE COMPLEXED WITH DETHIOBIOTIN, ADP, INORGANIC PHOSPHATE AND MAGNESIUM
Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kaeck, H, Sandmark, J, Gibson, K.J, Schneider, G, Lindqvist, Y.
Deposit date:1998-08-31
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of two quaternary complexes of dethiobiotin synthetase, enzyme-MgADP-AlF3-diaminopelargonic acid and enzyme-MgADP-dethiobiotin-phosphate; implications for catalysis.
Protein Sci., 7, 1998
6SL5
DownloadVisualize
BU of 6sl5 by Molmil
Dunaliella Photosystem I Supercomplex
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Nelson, N, Caspy, I, Malavath, T, Klaiman, D, Shkolinsky, Y.
Deposit date:2019-08-18
Release date:2020-06-24
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structure and energy transfer pathways of the Dunaliella Salina photosystem I supercomplex.
Biochim Biophys Acta Bioenerg, 1861, 2020
6STD
DownloadVisualize
BU of 6std by Molmil
SCYTALONE DEHYDRATASE PLUS INHIBITOR 3
Descriptor: 2,2-DICHLORO-1-METHANESULFINYL-3-METHYL-CYCLOPROPANECARBOXYLIC ACID [1-(4-BROMO-PHENYL)-ETHYL]-AMIDE, CALCIUM ION, Scytalone dehydratase
Authors:Wawrzak, Z, Sandalova, T, Steffens, J.J, Basarab, G.S, Lundqvist, T, Lindqvist, Y, Jordan, D.B.
Deposit date:1999-02-11
Release date:1999-12-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution structures of scytalone dehydratase-inhibitor complexes crystallized at physiological pH.
Proteins, 35, 1999
1YBV
DownloadVisualize
BU of 1ybv by Molmil
STRUCTURE OF TRIHYDROXYNAPHTHALENE REDUCTASE IN COMPLEX WITH NADPH AND AN ACTIVE SITE INHIBITOR
Descriptor: 5-METHYL-1,2,4-TRIAZOLO[3,4-B]BENZOTHIAZOLE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIHYDROXYNAPHTHALENE REDUCTASE
Authors:Andersson, A, Schneider, G, Lindqvist, Y.
Deposit date:1996-09-23
Release date:1997-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the ternary complex of 1,3,8-trihydroxynaphthalene reductase from Magnaporthe grisea with NADPH and an active-site inhibitor.
Structure, 4, 1996
5EQU
DownloadVisualize
BU of 5equ by Molmil
Crystal structure of the epimerase SnoN in complex with Fe3+, alpha ketoglutarate and nogalamycin RO
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, Nogalamycin RO, ...
Authors:Selvaraj, B, Lindqvist, Y, Siitonen, V, Metsa-Ketela, M, Schneider, G.
Deposit date:2015-11-13
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 113, 2016
5ERL
DownloadVisualize
BU of 5erl by Molmil
Crystal structure of the epimerase SnoN in complex with Ni2+, succinate and nogalamycin RO
Descriptor: NICKEL (II) ION, Nogalamycin RO, SUCCINIC ACID, ...
Authors:Selvaraj, B, Lindqvist, Y, Siitonen, V, Metsa-Ketela, M, Schneider, G.
Deposit date:2015-11-14
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EP9
DownloadVisualize
BU of 5ep9 by Molmil
Crystal structure of the non-heme alpha ketoglutarate dependent epimerase SnoN from nogalamycin biosynthesis
Descriptor: 2-OXOGLUTARIC ACID, ACETATE ION, FE (III) ION, ...
Authors:Selvaraj, B, Lindqvist, Y, Niiranen, L, Siitonen, V, Metsa-Ketela, M, Schneider, G.
Deposit date:2015-11-11
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 113, 2016
6T6N
DownloadVisualize
BU of 6t6n by Molmil
Crystal structure of Klebsiella pneumoniae FabG2(NADH-dependent) in complex with NADH at 2.5 A resolution
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-oxoacyl-[acyl-carrier protein] reductase, D-MALATE, ...
Authors:Vella, P, Schnell, R, Lindqvist, Y, Schneider, G.
Deposit date:2019-10-18
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A FabG inhibitor targeting an allosteric binding site inhibits several orthologs from Gram-negative ESKAPE pathogens.
Bioorg.Med.Chem., 30, 2021
5EZ7
DownloadVisualize
BU of 5ez7 by Molmil
Crystal structure of the FAD dependent oxidoreductase PA4991 from Pseudomonas aeruginosa
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MERCURY (II) ION, flavoenzyme PA4991
Authors:Jacewicz, A, Schnell, R, Lindqvist, Y, Schneider, G.
Deposit date:2015-11-26
Release date:2016-02-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the flavoenzyme PA4991 from Pseudomonas aeruginosa.
Acta Crystallogr.,Sect.F, 72, 2016
4STD
DownloadVisualize
BU of 4std by Molmil
HIGH RESOLUTION STRUCTURES OF SCYTALONE DEHYDRATASE-INHIBITOR COMPLEXES CRYSTALLIZED AT PHYSIOLOGICAL PH
Descriptor: N-[1-(4-BROMOPHENYL)ETHYL]-5-FLUORO SALICYLAMIDE, Scytalone dehydratase
Authors:Wawrzak, Z, Sandalova, T, Steffens, J.J, Basarab, G.S, Lundqvist, T, Lindqvist, Y, Jordan, D.B.
Deposit date:1999-02-10
Release date:1999-12-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:High-resolution structures of scytalone dehydratase-inhibitor complexes crystallized at physiological pH.
Proteins, 35, 1999
6YXR
DownloadVisualize
BU of 6yxr by Molmil
Dunaliella Minimal Photosystem I
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
Authors:Nelson, N, Caspy, I, Malavath, T, Klaiman, D, Shkolinsky, Y.
Deposit date:2020-05-03
Release date:2020-07-01
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and energy transfer pathways of the Dunaliella Salina photosystem I supercomplex.
Biochim Biophys Acta Bioenerg, 1861, 2020
5EPA
DownloadVisualize
BU of 5epa by Molmil
Crystal structure of non-heme alpha ketoglutarate dependent carbocyclase SnoK from nogalamycin biosynthesis
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, MAGNESIUM ION, ...
Authors:Selvaraj, B, Lindqvist, Y, Siitonen, V, Niiranen, L, Metsa-Ketela, M, Schneider, G.
Deposit date:2015-11-11
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 113, 2016

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon