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PDB: 939 results

2O6H
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Lumazine synthase RibH1 from Brucella melitensis (Gene BMEI1187, Swiss-Prot entry Q8YGH2) complexed with inhibitor 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase 1, CALCIUM ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2006-12-07
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Kinetic Properties of Lumazine Synthase Isoenzymes in the Order Rhizobiales
J.Mol.Biol., 373, 2007
2OBX
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Lumazine synthase RibH2 from Mesorhizobium loti (Gene mll7281, Swiss-Prot entry Q986N2) complexed with inhibitor 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase 1, PHOSPHATE ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2006-12-20
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural and kinetic properties of lumazine synthase isoenzymes in the order rhizobiales
J.Mol.Biol., 373, 2007
2MGX
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NMR structure of SRA1p C-terminal domain
Descriptor: Steroid receptor RNA activator 1
Authors:Bilinovich, S.M, Davis, C.M, Morris, D.L, Ray, L.A, Prokop, J.W, Buchan, G.J, Leeper, T.C.
Deposit date:2013-11-10
Release date:2014-02-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The C-Terminal Domain of SRA1p Has a Fold More Similar to PRP18 than to an RRM and Does Not Directly Bind to the SRA1 RNA STR7 Region.
J.Mol.Biol., 426, 2014
2MZC
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Metal Binding of Glutaredoxins
Descriptor: Glutaredoxin, SILVER ION
Authors:Bilinovich, S.M, Caporoso, J.A, Taraboletti, A, Duangjumpa, N, Panzner, M.J, Prokop, J.W, Shriver, L.P, Leeper, T.C.
Deposit date:2015-02-11
Release date:2016-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Metal Binding of Glutaredoxins
To be Published
4D6X
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Crystal structure of the receiver domain of NtrX from Brucella abortus
Descriptor: BACTERIAL REGULATORY, FIS FAMILY PROTEIN, IMIDAZOLE
Authors:Klinke, S, Fernandez, I, Carrica, M.C, Otero, L.H, Goldbaum, F.A.
Deposit date:2014-11-18
Release date:2015-07-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Snapshots of Conformational Changes Shed Light Into the Ntrx Receiver Domain Signal Transduction Mechanism
J.Mol.Biol., 427, 2015
2CXJ
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3D Solution Structure of S100A13
Descriptor: S100 calcium-binding protein A13
Authors:Vaithiyalingam, S, Kumar, T.K.S, Yu, C.
Deposit date:2005-06-30
Release date:2006-06-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-Dimensional Solution Structure of S100A13
To be Published
2F59
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Lumazine synthase RibH1 from Brucella abortus (Gene BruAb1_0785, Swiss-Prot entry Q57DY1) complexed with inhibitor 5-Nitro-6-(D-Ribitylamino)-2,4(1H,3H) Pyrimidinedione
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, 6,7-dimethyl-8-ribityllumazine synthase 1, CALCIUM ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2005-11-25
Release date:2006-11-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Kinetic Properties of Lumazine Synthase Isoenzymes in the Order Rhizobiales
J.Mol.Biol., 373, 2007
2FUI
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NMR solution structure of PHD finger fragment of human BPTF in free state
Descriptor: bromodomain PHD finger transcription factor
Authors:Ilin, S, Patel, D.J.
Deposit date:2006-01-26
Release date:2006-07-11
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2FUU
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NMR solution structure of the PHD domain from the human BPTF in complex with H3(1-15)K4me3 peptide
Descriptor: Histone H3, ZINC ION, bromodomain PHD finger transcription factor
Authors:Ilin, S, Patel, D.J.
Deposit date:2006-01-27
Release date:2006-07-11
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
5OMS
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Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with guaethol.
Descriptor: 2-ethoxyphenol, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mallinson, S.J.B, Johnson, C.W, Neidle, E.L, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-08-01
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Nat Commun, 9, 2018
5OGX
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Crystal structure of Amycolatopsis cytochrome P450 reductase GcoB.
Descriptor: BROMIDE ION, Cytochrome P450 reductase, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Mallinson, S.J.B, Johnson, C.W, Neidle, E.L, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-07-13
Release date:2018-07-04
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Nat Commun, 9, 2018
5OMU
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Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with syringol
Descriptor: 2,6-dimethoxyphenol, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mallinson, S.J.B, Johnson, C.W, Neidle, E.L, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-08-01
Release date:2018-07-04
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Nat Commun, 9, 2018
5OMR
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Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with vanillin.
Descriptor: 4-hydroxy-3-methoxybenzaldehyde, GcoA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mallinson, S.J.B, Johnson, C.W, Neidle, E.L, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-08-01
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Nat Commun, 9, 2018
2JMI
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NMR solution structure of PHD finger fragment of Yeast Yng1 protein in free state
Descriptor: Protein YNG1, ZINC ION
Authors:Ilin, S, Taverna, S.D, Rogers, R.S, Tanny, J.C, Lavender, H, Li, H, Baker, L, Boyle, J, Blair, L.P, Chait, B.T, Patel, D.J, Aitchison, J.D, Tackett, A.J, Allis, C.D.
Deposit date:2006-11-15
Release date:2007-07-03
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24, 2006
2JMJ
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BU of 2jmj by Molmil
NMR solution structure of the PHD domain from the yeast YNG1 protein in complex with H3(1-9)K4me3 peptide
Descriptor: Histone H3, Protein YNG1, ZINC ION
Authors:Ilin, S, Taverna, S.D, Rogers, R.S, Tanny, J.C, Lavender, H, Li, H, Baker, L, Boyle, J, Blair, L.P, Chait, B.T, Patel, D.J, Aitchison, J.D, Tackett, A.J, Allis, C.D.
Deposit date:2006-11-15
Release date:2007-07-03
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24, 2006
2U2A
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BU of 2u2a by Molmil
STEM LOOP IIA FROM U2 SNRNA OF SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: RNA (5'-R(P*GP*GP*UP*CP*AP*GP*UP*GP*UP*AP*AP*CP*AP*AP*CP*UP*GP*AP*CP*C)-3')
Authors:Stallings, S.C, Moore, P.B.
Deposit date:1997-08-20
Release date:1998-03-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of an essential splicing element: stem loop IIa from yeast U2 snRNA.
Structure, 5, 1997
2I0F
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Lumazine synthase RibH1 from Brucella abortus (Gene BruAb1_0785, Swiss-Prot entry Q57DY1)
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase 1, CALCIUM ION
Authors:Klinke, S, Zylberman, V, Bonomi, H.R, Haase, I, Guimaraes, B.G, Braden, B.C, Bacher, A, Fischer, M, Goldbaum, F.A.
Deposit date:2006-08-10
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural and Kinetic Properties of Lumazine Synthase Isoenzymes in the Order Rhizobiales
J.Mol.Biol., 373, 2007
2JYP
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Coordinates for lowest energy structure of Aragonite protein-7, C-terminal domain
Descriptor: Aragonite protein AP7
Authors:Collino, S, Kim, I, Evans, J.
Deposit date:2007-12-16
Release date:2008-02-12
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Identification and Structural Characterization of an Unusual RING-Like Sequence within an Extracellular Biomineralization Protein, AP7.
Biochemistry, 47, 2008
5A3I
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Crystal Structure of a Complex formed between FLD194 Fab and Transmissible Mutant H5 Haemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ANTI-HAEMAGGLUTININ HA1 FAB HEAVY CHAIN, ...
Authors:Xiong, X, Corti, D, Liu, J, Pinna, D, Foglierini, M, Calder, L.J, Martin, S.R, Lin, Y.P, Walker, P.A, Collins, P.J, Monne, I, Suguitan Jr, A.L, Santos, C, Temperton, N.J, Subbarao, K, Lanzavecchia, A, Gamblin, S.J, Skehel, J.J.
Deposit date:2015-06-01
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structures of Complexes Formed by H5 Influenza Hemagglutinin with a Potent Broadly Neutralizing Human Monoclonal Antibody.
Proc.Natl.Acad.Sci.USA, 112, 2015
3CL0
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BU of 3cl0 by Molmil
N1 Neuraminidase H274Y + oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, Neuraminidase
Authors:Collins, P, Haire, L.F, Lin, Y.P, Liu, J, Russell, R.J, Walker, P.A, Skehel, J.J, Martin, S.R, Hay, A.J, Gamblin, S.J.
Deposit date:2008-03-18
Release date:2008-05-20
Last modified:2018-08-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants.
Nature, 453, 2008
3DHE
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BU of 3dhe by Molmil
ESTROGENIC 17-BETA HYDROXYSTEROID DEHYDROGENASE COMPLEXED DEHYDROEPIANDROSTERONE
Descriptor: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, ESTROGENIC 17-BETA HYDROXYSTEROID DEHYDROGENASE
Authors:Han, Q, Campbell, R.L, Gangloff, A, Lin, S.X.
Deposit date:1998-03-25
Release date:1999-09-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dehydroepiandrosterone and dihydrotestosterone recognition by human estrogenic 17beta-hydroxysteroid dehydrogenase. C-18/c-19 steroid discrimination and enzyme-induced strain.
J.Biol.Chem., 275, 2000
2G7C
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BU of 2g7c by Molmil
Clostridium difficile Toxin A Fragment Bound to aGal(1,3)bGal(1,4)bGlcNAc
Descriptor: GLYCEROL, Toxin A, alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Greco, A, Ho, J.G.S, Lin, S.J, Palcic, M.M, Rupnik, M, Ng, K.K.S.
Deposit date:2006-02-28
Release date:2006-04-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Carbohydrate recognition by Clostridium difficile toxin A.
Nat.Struct.Mol.Biol., 13, 2006
8XP9
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BU of 8xp9 by Molmil
Crystal structure of d(ACGCCGT/ACGGCGT)
Descriptor: DNA (5'-D(P*AP*CP*GP*CP*CP*GP*T)-3'), DNA (5'-D(P*AP*CP*GP*GP*CP*GP*T)-3')
Authors:Hou, M.H, Lin, S.M, Lin, Y.J, Neidle, S.
Deposit date:2024-01-03
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of d(ACGCCGT/ACGGCGT)
To Be Published
8XPB
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Crystal structure of d(ACGCCGT/ACGGCGT) in complex with Echinomycin
Descriptor: 2-CARBOXYQUINOXALINE, DNA (5'-D(P*AP*CP*GP*CP*CP*GP*T)-3'), DNA (5'-D(P*AP*CP*GP*GP*CP*GP*T)-3'), ...
Authors:Hou, M.H, Huang, H.T, Lin, S.M, Neidle, S.
Deposit date:2024-01-03
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of d(ACGCCGT/ACGGCGT) in complex with Echinomycin
To Be Published
8WR4
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Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (non-targeting complex)
Descriptor: CbCas9 effector-1, DNA (62-MER), MAGNESIUM ION, ...
Authors:Zhang, S, Lin, S, Liu, J.J.G.
Deposit date:2023-10-13
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024

222624

數據於2024-07-17公開中

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