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PDB: 181 results

8P03
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BU of 8p03 by Molmil
48S late-stage initiation complex with m6A mRNA
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
Deposit date:2023-05-09
Release date:2024-03-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
6QV1
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BU of 6qv1 by Molmil
Structure of ATPgS-bound outward-facing TM287/288 in complex with nanobody Nb_TM1
Descriptor: ABC transporter, ATP-binding protein, MAGNESIUM ION, ...
Authors:Hutter, C.A.J, Huerlimann, L.M, Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2019-03-01
Release date:2019-05-29
Last modified:2019-06-05
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:The extracellular gate shapes the energy profile of an ABC exporter.
Nat Commun, 10, 2019
6QV2
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BU of 6qv2 by Molmil
Structure of ATPgS-bound outward-facing TM287/288 in complex with nanobody Nb_TM#2
Descriptor: ABC transporter, ATP-binding protein, MAGNESIUM ION, ...
Authors:Hutter, C.A.J, Huerlimann, L.M, Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2019-03-01
Release date:2019-05-29
Last modified:2019-06-05
Method:X-RAY DIFFRACTION (4.23 Å)
Cite:The extracellular gate shapes the energy profile of an ABC exporter.
Nat Commun, 10, 2019
6QUZ
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BU of 6quz by Molmil
Structure of ATPgS-bound outward-facing TM287/288 in complex with sybody Sb_TM35
Descriptor: ABC transporter, ATP-binding protein, MAGNESIUM ION, ...
Authors:Hutter, C.A.J, Huerlimann, L.M, Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2019-03-01
Release date:2019-05-29
Last modified:2019-06-05
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:The extracellular gate shapes the energy profile of an ABC exporter.
Nat Commun, 10, 2019
6QV0
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BU of 6qv0 by Molmil
Structure of ATP-bound outward-facing TM287/288 in complex with sybody Sb_TM35
Descriptor: ABC transporter, ATP-binding protein, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Hutter, C.A.J, Huerlimann, L.M, Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2019-03-01
Release date:2019-05-29
Last modified:2019-06-05
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:The extracellular gate shapes the energy profile of an ABC exporter.
Nat Commun, 10, 2019
5CNY
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BU of 5cny by Molmil
Crystal Structure of human zinc insulin at pH 5.5
Descriptor: CHLORIDE ION, Insulin, ZINC ION
Authors:Palmieri, L.C, Lima, L.M.T.R.
Deposit date:2015-07-18
Release date:2015-08-26
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of human zinc insulin at pH 5.5
To Be Published
6UOH
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BU of 6uoh by Molmil
Asparaginase II from Escherichia coli
Descriptor: ASPARTIC ACID, L-asparaginase 2
Authors:Araujo, T.S, Almeida, M.S, Lima, L.M.T.R.
Deposit date:2019-10-14
Release date:2020-10-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2.
Biophys.Chem., 271, 2021
6UOG
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BU of 6uog by Molmil
Asparaginase II from Escherichia coli
Descriptor: ASPARTIC ACID, L-asparaginase 2
Authors:Araujo, T.S, Almeida, M.S, Lima, L.M.T.R.
Deposit date:2019-10-14
Release date:2020-10-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2.
Biophys.Chem., 271, 2021
6UOD
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BU of 6uod by Molmil
Asparaginase II from Escherichia coli
Descriptor: L-asparaginase 2
Authors:Araujo, T.S, Almeida, M.S, Lima, L.M.T.R.
Deposit date:2019-10-14
Release date:2020-10-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2.
Biophys.Chem., 271, 2021
5VFM
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BU of 5vfm by Molmil
Crystal structure of BnSP-7 from Bothrops pauloensis complexed with p-coumaric acid
Descriptor: 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, 4'-HYDROXYCINNAMIC ACID, Basic phospholipase A2 homolog BnSP-7, ...
Authors:De Lima, L.F.G, Fontes, M.R.M.
Deposit date:2017-04-08
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.058 Å)
Cite:Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins.
Biochimie, 142, 2017
3DGD
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BU of 3dgd by Molmil
Crystal structure of the F87M/L110M mutant of human transthyretin at pH 4.6
Descriptor: ACETATE ION, GLYCEROL, Transthyretin, ...
Authors:Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R.
Deposit date:2008-06-13
Release date:2008-07-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.383 Å)
Cite:Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition.
J.Biol.Chem., 285, 2010
5VFN
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BU of 5vfn by Molmil
Crystal structure of BnSP-7 from Bothrops pauloensis complexed with cinnamic acid
Descriptor: 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, Basic phospholipase A2 homolog BnSP-7, HYDROCINNAMIC ACID, ...
Authors:De Lima, L.F.G, Fontes, M.R.M.
Deposit date:2017-04-08
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.389 Å)
Cite:Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins.
Biochimie, 142, 2017
3DID
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BU of 3did by Molmil
Crystal structure of the F87M/L110M mutant of human transthyretin at pH 4.6 soaked
Descriptor: ACETATE ION, GLYCEROL, Transthyretin, ...
Authors:Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R.
Deposit date:2008-06-20
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition.
J.Biol.Chem., 285, 2010
3GRB
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BU of 3grb by Molmil
Crystal structure of the F87M/L110M mutant of human transthyretin at pH 6.5
Descriptor: ACETATE ION, GLYCEROL, Transthyretin, ...
Authors:Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R.
Deposit date:2009-03-25
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition.
J.Biol.Chem., 285, 2010
3I9I
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BU of 3i9i by Molmil
Crystal structure of human transthyretin variant A25T - #2
Descriptor: TRIETHYLENE GLYCOL, Transthyretin
Authors:Palmieri, L.C, Freire, J.B.B, Palhano, F.L, Azevedo, E.P.C, Foguel, D, Lima, L.M.T.R.
Deposit date:2009-07-11
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human transthyretin variant A25T - #2
To be Published
3GRG
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BU of 3grg by Molmil
Crystal structure of the F87M/L110M mutant of human transthyretin at pH 7.5
Descriptor: ACETATE ION, GLYCEROL, Transthyretin, ...
Authors:Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R.
Deposit date:2009-03-25
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition.
J.Biol.Chem., 285, 2010
3GPS
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BU of 3gps by Molmil
Crystal structure of the F87M/L110M mutant of human transthyretin at pH 5.5
Descriptor: ACETATE ION, GLYCEROL, Transthyretin, ...
Authors:Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R.
Deposit date:2009-03-23
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition.
J.Biol.Chem., 285, 2010
3I9A
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BU of 3i9a by Molmil
Crystal structure of human transthyretin variant A25T - #1
Descriptor: TRIETHYLENE GLYCOL, Transthyretin
Authors:Palmieri, L.C, Freire, J.B.B, Palhano, F.L, Azevedo, E.P.C, Foguel, D, Lima, L.M.T.R.
Deposit date:2009-07-10
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of human transthyretin variant A25T - #1
To be Published
5VFH
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BU of 5vfh by Molmil
Crystal structure of BnSP-7 from Bothrops pauloensis complexed to sulfates
Descriptor: Basic phospholipase A2 homolog BnSP-7, SULFATE ION
Authors:De Lima, L.F, Fontes, M.R.M.
Deposit date:2017-04-07
Release date:2017-12-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.592 Å)
Cite:Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins.
Biochimie, 142, 2017
3RTP
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BU of 3rtp by Molmil
Design and synthesis of brain penetrant selective JNK inhibitors with improved pharmacokinetic properties for the prevention of neurodegeneration
Descriptor: Mitogen-activated protein kinase 10, N-[4-cyano-3-(1H-1,2,4-triazol-5-yl)thiophen-2-yl]-2-(2-oxo-3,4-dihydroquinolin-1(2H)-yl)acetamide
Authors:Bowers, S, Truong, A.P, Neitz, R.J, Hom, R.K, Sealy, J.M, Probst, G.D, Quincy, Q, Peterson, B, Chan, W, Galemmo Jr, R.A, Konradi, A.W, Sham, H.L, Pan, H, Lin, M, Yao, N, Artis, D.R, Zhang, H, Chen, L, Dryer, M, Samant, B, Zmolek, W, Wong, K, Lorentzen, C, Goldbach, E, Tonn, G, Quinn, K.P, Sauer, J, Wright, S, Powell, K, Ruslim, L, Ren, Z, Bard, F, Yednock, T.A, Griswold-Prenne, I.
Deposit date:2011-05-03
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and synthesis of brain penetrant selective JNK inhibitors with improved pharmacokinetic properties for the prevention of neurodegeneration.
Bioorg.Med.Chem.Lett., 21, 2011
4I5M
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BU of 4i5m by Molmil
Selective & Brain-Permeable Polo-like Kinase-2 (Plk-2) Inhibitors that Reduce -Synuclein Phosphorylation in Rat Brain
Descriptor: 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide, Serine/threonine-protein kinase PLK2
Authors:Aubele, D.L, Hom, R.K, Adler, M, Galemmo Jr, R.A, Bowers, S, Truong, A.P, Pan, H, Beroza, P, Neitz, R.J, Yao, N, Lin, M, Tonn, G, Zhang, H, Bova, M.P, Ren, Z, Tam, D, Ruslim, L, Baker, J, Diep, L, Fitzgerald, K, Hoffman, J, Motter, R, Fauss, D, Tanaka, P, Dappen, M, Jagodzinski, J, Chan, W, Konradi, A.W, Latimer, L, Zhu, Y.L, Artis, D.R, Sham, H.L, Anderson, J.P, Bergeron, M.
Deposit date:2012-11-28
Release date:2013-12-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Selective and brain-permeable polo-like kinase-2 (Plk-2) inhibitors that reduce alpha-synuclein phosphorylation in rat brain.
Chemmedchem, 8, 2013
5VFJ
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BU of 5vfj by Molmil
Crystal structure of BnSP-7 from bothrops pauloensis complexed with caffeic acid
Descriptor: Basic phospholipase A2 homolog BnSP-7, CAFFEIC ACID, SULFATE ION
Authors:De Lima, L.F.G, Fontes, M.R.M.
Deposit date:2017-04-07
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.084 Å)
Cite:Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins.
Biochimie, 142, 2017
3PTG
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BU of 3ptg by Molmil
Design and Synthesis of a Novel, Orally Efficacious Tri-substituted Thiophene Based JNK Inhibitor
Descriptor: C-Jun-amino-terminal kinase-interacting protein 1, Mitogen-activated protein kinase 10, N-[4-methyl-3-(1H-1,2,4-triazol-5-yl)thiophen-2-yl]-2-(2-oxo-3,4-dihydroquinolin-1(2H)-yl)acetamide
Authors:Bowers, S, Truong, A.P, Neitz, J, Neitzel, M, Probst, G.D, Hom, R.K, Konradi, A.W, Sham, H.L, Toth, G, Pan, H, Yao, N, Artis, D.R, Brigham, E.F, Quinn, K.P, Sauer, J, Powell, K, Ruslim, L, Bard, F, Yednock, T.A, Griswold-Prenner, I.
Deposit date:2010-12-02
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Design and synthesis of a novel, orally active, brain penetrant, tri-substituted thiophene based JNK inhibitor.
Bioorg.Med.Chem.Lett., 21, 2011
8D5T
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BU of 8d5t by Molmil
Crystal structure of hen egg white lysozyme at 100 Kelvin (Duplicate)
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:Ribeiro, F.S, Lima, L.M.T.R.
Deposit date:2022-06-06
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Linking B-factor and temperature-induced conformational transition.
Biophys.Chem., 298, 2023
8D69
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BU of 8d69 by Molmil
Crystal structure of hen egg white lysozyme at 175 Kelvin
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:Ribeiro, F.S, Lima, L.M.T.R.
Deposit date:2022-06-06
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Linking B-factor and temperature-induced conformational transition.
Biophys.Chem., 298, 2023

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