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PDB: 26 件

1DKP
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CRYSTAL STRUCTURE OF PHYTATE COMPLEX OF ESCHERICHIA COLI PHYTASE AT PH 6.6. PHYTATE IS BOUND WITH ITS 3-PHOSPHATE IN THE ACTIVE SITE. HG2+ CATION ACTS AS AN INTERMOLECULAR BRIDGE
分子名称: INOSITOL HEXAKISPHOSPHATE, MERCURY (II) ION, PHYTASE
著者Lim, D, Golovan, S, Forsberg, C.W, Jia, Z.
登録日1999-12-08
公開日2000-08-03
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structures of Escherichia coli phytase and its complex with phytate.
Nat.Struct.Biol., 7, 2000
1DKN
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI PHYTASE AT PH 5.0 WITH HG2+ CATION ACTING AS AN INTERMOLECULAR BRIDGE
分子名称: MERCURY (II) ION, PHYTASE
著者Lim, D, Golovan, S, Forsberg, C.W, Jia, Z.
登録日1999-12-08
公開日2000-08-03
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of Escherichia coli phytase and its complex with phytate.
Nat.Struct.Biol., 7, 2000
8GSV
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Crystal structure of human BAK in complex with the Pxt1 BH3 domain
分子名称: Bcl-2 homologous antagonist/killer, Peroxisomal testis-specific protein 1
著者Lim, D, Ku, B.
登録日2022-09-07
公開日2023-05-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for proapoptotic activation of Bak by the noncanonical BH3-only protein Pxt1.
Plos Biol., 21, 2023
1G68
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PSE-4 CARBENICILLINASE, WILD TYPE
分子名称: BETA-LACTAMASE PSE-4, SULFATE ION
著者Lim, D, Sanschagrin, F, Passmore, L, De Castro, L, Levesque, R.C, Strynadka, N.C.J.
登録日2000-11-03
公開日2001-02-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Insights into the molecular basis for the carbenicillinase activity of PSE-4 beta-lactamase from crystallographic and kinetic studies.
Biochemistry, 40, 2001
1G6A
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PSE-4 CARBENICILLINASE, R234K MUTANT
分子名称: BETA-LACTAMASE PSE-4, SULFATE ION
著者Lim, D, Sanschagrin, F, Passmore, L, De Castro, L, Levesque, R.C, Strynadka, N.C.J.
登録日2000-11-03
公開日2001-02-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Insights into the molecular basis for the carbenicillinase activity of PSE-4 beta-lactamase from crystallographic and kinetic studies.
Biochemistry, 40, 2001
1DKM
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI PHYTASE AT PH 6.6 WITH HG2+ CATION ACTING AS AN INTERMOLECULAR BRIDGE
分子名称: MERCURY (II) ION, PHYTASE
著者Lim, D, Golovan, S, Forsberg, C.W, Jia, Z.
登録日1999-12-08
公開日2000-08-02
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structures of Escherichia coli phytase and its complex with phytate.
Nat.Struct.Biol., 7, 2000
1DKL
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI PHYTASE AT PH 4.5 (NO LIGAND BOUND)
分子名称: PHYTASE
著者Lim, D, Golovan, S, Forsberg, C.W, Jia, Z.
登録日1999-12-08
公開日2000-08-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of Escherichia coli phytase and its complex with phytate.
Nat.Struct.Biol., 7, 2000
1DKQ
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CRYSTAL STRUCTURE OF PHYTATE COMPLEX ESCHERICHIA COLI PHYTASE AT PH 5.0. PHYTATE IS BOUND WITH ITS 3-PHOSPHATE IN THE ACTIVE SITE. HG2+ CATION ACTS AS AN INTERMOLECULAR BRIDGE
分子名称: INOSITOL HEXAKISPHOSPHATE, MERCURY (II) ION, PHYTASE
著者Lim, D, Golovan, S, Forsberg, C.W, Jia, Z.
登録日1999-12-08
公開日2000-08-03
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of Escherichia coli phytase and its complex with phytate.
Nat.Struct.Biol., 7, 2000
1DKO
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CRYSTAL STRUCTURE OF TUNGSTATE COMPLEX OF ESCHERICHIA COLI PHYTASE AT PH 6.6 WITH TUNGSTATE BOUND AT THE ACTIVE SITE AND WITH HG2+ CATION ACTING AS AN INTERMOLECULAR BRIDGE
分子名称: MERCURY (II) ION, PHYTASE, TUNGSTATE(VI)ION
著者Lim, D, Golovan, S, Forsberg, C.W, Jia, Z.
登録日1999-12-08
公開日2000-08-03
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structures of Escherichia coli phytase and its complex with phytate.
Nat.Struct.Biol., 7, 2000
7WJH
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Crystal structure of Bcl-xL bound to the BH3 domain of human Pxt1
分子名称: Bcl-2-like protein 1, MAGNESIUM ION, Peroxisomal testis-specific protein 1, ...
著者Lim, D, Ku, B.
登録日2022-01-06
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Structural and biochemical analyses of Bcl-xL in complex with the BH3 domain of peroxisomal testis-specific 1.
Biochem.Biophys.Res.Commun., 625, 2022
1VQQ
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Structure of Penicillin binding protein 2a from methicillin resistant Staphylococcus aureus strain 27r at 1.80 A resolution.
分子名称: CADMIUM ION, CHLORIDE ION, penicillin-binding protein mecA, ...
著者Lim, D, Strynadka, N.C.J.
登録日2004-12-17
公開日2004-12-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the beta lactam resistance of PBP2a from methicillin-resistant Staphylococcus aureus.
Nat.Struct.Biol., 9, 2002
2HB5
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Crystal Structure of the Moloney Murine Leukemia Virus RNase H Domain
分子名称: MAGNESIUM ION, Reverse transcriptase/ribonuclease H, SULFATE ION
著者Lim, D, Gregorio, G.G, Bingman, C.A, Martinez-Hackert, E, Hendrickson, W.A, Goff, S.P.
登録日2006-06-13
公開日2006-08-29
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Crystal Structure of the Moloney Murine Leukemia Virus RNase H Domain.
J.Virol., 80, 2006
4JRN
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ROP18 kinase domain in complex with AMP-PNP and sucrose
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Rhoptry kinase family protein, ...
著者Lim, D, Gold, D.A, Lindsay, J, Rosowski, E.E, Niedelman, W, Yaffe, M.B, Saeij, J.P.J.
登録日2013-03-21
公開日2013-10-23
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structure of the Toxoplasma gondii ROP18 kinase domain reveals a second ligand binding pocket required for acute virulence.
J.Biol.Chem., 288, 2013
8IGC
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Crystal structure of Bak bound to Bnip5 BH3
分子名称: Bcl-2 homologous antagonist/killer, Protein BNIP5
著者Ku, B, Lim, D.
登録日2023-02-20
公開日2023-09-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献Crystal structure of Bak bound to the BH3 domain of Bnip5, a noncanonical BH3 domain-containing protein.
Proteins, 92, 2024
1MDW
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Crystal Structure of Calcium-Bound Protease Core of Calpain II Reveals the Basis for Intrinsic Inactivation
分子名称: CALCIUM ION, Calpain II, catalytic subunit
著者Moldoveanu, T, Hosfield, C.M, Lim, D, Jia, Z, Davies, P.L.
登録日2002-08-07
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Calpain silencing by a reversible intrinsic mechanism.
Nat.Struct.Biol., 10, 2003
6JM4
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The crystal structure of PB1 homo-dimer of human P62/SQSTM1
分子名称: Sequestosome-1
著者Shin, H.C, Lim, D, Kim, S.J.
登録日2019-03-07
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.20014834 Å)
主引用文献Oligomer Model of PB1 Domain of p62/SQSTM1 Based on Crystal Structure of Homo-Dimer and Calculation of Helical Characteristics.
Mol.Cells, 42, 2019
1RO8
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Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analogue, cytidine-5'-monophosphate
分子名称: CYTIDINE-5'-MONOPHOSPHATE, alpha-2,3/8-sialyltransferase
著者Chiu, C.P, Watts, A.G, Lairson, L.L, Gilbert, M, Lim, D, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.
登録日2003-12-01
公開日2004-02-03
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog.
Nat.Struct.Mol.Biol., 11, 2004
1RO7
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Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analogue, CMP-3FNeuAc.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID, alpha-2,3/8-sialyltransferase
著者Chiu, C.P, Watts, A.G, Lairson, L.L, Gilbert, M, Lim, D, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.
登録日2003-12-01
公開日2004-02-03
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog.
Nat.Struct.Mol.Biol., 11, 2004
1K3E
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Type III secretion chaperone CesT
分子名称: CesT
著者Luo, Y, Bertero, M, Frey, E.A, Pfuetzner, R.A, Wenk, M.R, Creagh, L, Marcus, S.L, Lim, D, Finlay, B.B, Strynadka, N.C.J.
登録日2001-10-02
公開日2001-11-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and biochemical characterization of the type III secretion chaperones CesT and SigE.
Nat.Struct.Biol., 8, 2001
1K3S
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Type III Secretion Chaperone SigE
分子名称: PHOSPHATE ION, SigE
著者Bertero, M.G, Luo, Y, Frey, E.A, Pfuetzner, R.A, Wenk, M.R, Creagh, L, Marcus, S.L, Lim, D, Finlay, B.B, Strynadka, N.C.J.
登録日2001-10-03
公開日2001-11-28
最終更新日2016-05-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and biochemical characterization of the type III secretion chaperones CesT and SigE.
Nat.Struct.Biol., 8, 2001
1KXR
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Crystal Structure of Calcium-Bound Protease Core of Calpain I
分子名称: CALCIUM ION, thiol protease DOMAINS I AND II
著者Moldoveanu, T, Hosfield, C.M, Lim, D, Elce, J.S, Jia, Z, Davies, P.L.
登録日2002-02-01
公開日2002-03-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献A Ca(2+) switch aligns the active site of calpain.
Cell(Cambridge,Mass.), 108, 2002
2OLV
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Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex
分子名称: MOENOMYCIN, Penicillin-binding protein 2
著者Lovering, A.L, De Castro, L, Lim, D, Strynadka, N.C.J.
登録日2007-01-19
公開日2007-03-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insight into the transglycosylation step of bacterial cell-wall biosynthesis.
Science, 315, 2007
7D35
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Human LC8 bound to ebola virus VP35(67-76)
分子名称: Dynein light chain 1, cytoplasmic, Peptide from Polymerase cofactor VP35
著者Ku, B, Lim, D.
登録日2020-09-18
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Crystal structure of human LC8 bound to a peptide from Ebola virus VP35.
J.Microbiol, 59, 2021
4DFW
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Oxime-based Post Solid-phase Peptide Diversification: Identification of High Affinity Polo-like Kinase 1 (Plk1) Polo-box Domain Binding Peptides
分子名称: CHLORIDE ION, Peptide, Serine/threonine-protein kinase PLK1
著者Liu, F, Park, J.-E, Qian, W.-J, Lim, D, Gr ber, M, Berg, T, Yaffe, M.B, Lee, K.S, Burke Jr, T.R.
登録日2012-01-24
公開日2012-03-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Oxime-based Post Solid-phase Peptide Diversification: Identification of High Affinity Polo-like Kinase 1 (Plk1) Polo-box Domain Binding Peptides
Chem.Biol., 2012
2OLU
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Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Apoenzyme
分子名称: 1,2-ETHANEDIOL, Penicillin-binding protein 2
著者Lovering, A.L, De Castro, L.H, Lim, D, Strynadka, N.C.
登録日2007-01-19
公開日2007-03-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insight into the transglycosylation step of bacterial cell-wall biosynthesis.
Science, 315, 2007

 

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