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PDB: 249 results

5WAX
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Crystal Structure of Sugarcane SAPK10 (serine/threonine-protein kinase 10)
Descriptor: GLYCEROL, SAPK10 (serine/threonine-protein kinase 10)
Authors:Righetto, G.L, Counago, R.M, Halabelian, L, Santiago, A.S, Massirer, K.B, Arruda, P, Gileadi, O, Menossi, M, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
Deposit date:2017-06-27
Release date:2018-08-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Sugarcane SAPK10 (serine/threonine-protein kinase 10)
To Be Published
7MEX
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BU of 7mex by Molmil
Structure of yeast Ubr1 in complex with Ubc2 and N-degron
Descriptor: E3 ubiquitin-protein ligase UBR1, N-degron, Ubiquitin, ...
Authors:Pan, M, Zheng, Q, Wang, T, Liang, L, Yu, Y, Liu, L, Zhao, M.
Deposit date:2021-04-08
Release date:2021-11-24
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural insights into Ubr1-mediated N-degron polyubiquitination.
Nature, 600, 2021
1VYH
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BU of 1vyh by Molmil
PAF-AH Holoenzyme: Lis1/Alfa2
Descriptor: PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB ALPHA SUBUNIT, PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT
Authors:Tarricone, C, Perrina, F, Monzani, S, Massimiliano, L, Knapp, S, Tsai, L.-H, Derewenda, Z.S, Musacchio, A.
Deposit date:2004-04-30
Release date:2005-05-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Coupling Paf Signaling to Dynein Regulation: Structure of Lis1 in Complex with Paf-Acetylhydrolase.
Neuron, 44, 2004
2JQG
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Leader Protease
Descriptor: Genome polyprotein
Authors:Cencic, R, Mayer, C, Juliano, M.A, Juliano, L, Konrat, R, Kontaxis, G, Skern, T.
Deposit date:2007-06-01
Release date:2007-07-24
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Investigating the Substrate Specificity and Oligomerisation of the Leader Protease of Foot and Mouth Disease Virus using NMR
J.Mol.Biol., 373, 2007
4J59
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BU of 4j59 by Molmil
Human Cyclophilin D Complexed with an Inhibitor
Descriptor: 1-(4-aminobenzyl)-3-{2-[(2R)-2-(naphthalen-1-yl)pyrrolidin-1-yl]-2-oxoethyl}urea, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
Authors:Gelin, M, Colliandre, L, Bessin, Y, Guichou, J.F.
Deposit date:2013-02-08
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
4J5A
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BU of 4j5a by Molmil
Human Cyclophilin D Complexed with an Inhibitor
Descriptor: 1-(4-aminobenzyl)-3-{2-[(2R)-2-(2,5-dimethoxyphenyl)pyrrolidin-1-yl]-2-oxoethyl}urea, DIMETHYL SULFOXIDE, Peptidyl-prolyl cis-trans isomerase F, ...
Authors:Gelin, M, Colliandre, L, Bessin, Y, Guichou, J.F.
Deposit date:2013-02-08
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Rationnal Design of small-molecule inhibitors of human Cyclophilins and HCV replication.
to be published
2JQF
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BU of 2jqf by Molmil
Full Length Leader Protease of Foot and Mouth Disease Virus C51A Mutant
Descriptor: Genome polyprotein
Authors:Cencic, R, Mayer, C, Juliano, M.A, Juliano, L, Konrat, R, Kontaxis, G, Skern, T.
Deposit date:2007-06-01
Release date:2007-07-17
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Investigating the Substrate Specificity and Oligomerisation of the Leader Protease of Foot and Mouth Disease Virus using NMR
J.Mol.Biol., 373, 2007
1UNL
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BU of 1unl by Molmil
Structural mechanism for the inhibition of CD5-p25 from the roscovitine, aloisine and indirubin.
Descriptor: CYCLIN-DEPENDENT KINASE 5, CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1, R-ROSCOVITINE
Authors:Mapelli, M, Crovace, C, Massimiliano, L, Musacchio, A.
Deposit date:2003-09-10
Release date:2004-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of Cdk5/P25 Binding by Cdk Inhibitors
J.Med.Chem., 48, 2005
5VGT
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BU of 5vgt by Molmil
X-ray structure of bacteriophage Sf6 tail adaptor protein gp7
Descriptor: CALCIUM ION, Gene 7 protein, MAGNESIUM ION
Authors:Tang, L, Liang, L, Zhao, H.
Deposit date:2017-04-11
Release date:2017-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.776 Å)
Cite:High-resolution structure of podovirus tail adaptor suggests repositioning of an octad motif that mediates the sequential tail assembly.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1UNG
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BU of 1ung by Molmil
Structural mechanism for the inhibition of CDK5-p25 by roscovitine, aloisine and indirubin.
Descriptor: 6-PHENYL[5H]PYRROLO[2,3-B]PYRAZINE, CELL DIVISION PROTEIN KINASE 5, CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1
Authors:Mapelli, M, Crovace, C, Massimiliano, L, Musacchio, A.
Deposit date:2003-09-10
Release date:2004-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of Cdk5/P25 Binding by Cdk Inhibitors
J.Med.Chem., 48, 2005
1UNH
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Structural mechanism for the inhibition of CDK5-p25 by roscovitine, aloisine and indirubin.
Descriptor: (Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME, CYCLIN-DEPENDENT KINASE 5, CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1
Authors:Mapelli, M, Crovace, C, Massimiliano, L, Musacchio, A.
Deposit date:2003-09-10
Release date:2004-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Mechanism of Cdk5/P25 Binding by Cdk Inhibitors
J.Med.Chem., 48, 2005
7M3X
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BU of 7m3x by Molmil
Crystal Structure of the Apo Form of Human RBBP7
Descriptor: Histone-binding protein RBBP7, UNKNOWN ATOM OR ION
Authors:Righetto, G.L, Dong, A, Li, Y, Hutchinson, A, Seitova, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2021-03-19
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal Structure of the Apo Form of Human RBBP7
To Be Published
4J5C
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BU of 4j5c by Molmil
Human Cyclophilin D Complexed with an Inhibitor
Descriptor: 1-(4-aminobenzyl)-3-[(2S)-4-(methylsulfanyl)-1-{(2R)-2-[2-(methylsulfanyl)phenyl]pyrrolidin-1-yl}-1-oxobutan-2-yl]urea, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
Authors:Gelin, M, Colliandre, L, Bessin, Y, Guichou, J.F.
Deposit date:2013-02-08
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
4J5E
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BU of 4j5e by Molmil
Human Cyclophilin D Complexed with an Inhibitor
Descriptor: 1-(4-aminobenzyl)-3-{2-[(2R)-2-(2-methoxyphenyl)pyrrolidin-1-yl]-2-oxoethyl}urea, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
Authors:Gelin, M, Colliandre, L, Bessin, Y, Guichou, J.F.
Deposit date:2013-02-08
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
1EF7
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BU of 1ef7 by Molmil
CRYSTAL STRUCTURE OF HUMAN CATHEPSIN X
Descriptor: CATHEPSIN X
Authors:Guncar, G, Klemencic, I, Turk, B, Turk, V, Karaoglanovic-Carmona, A, Juliano, L, Turk, D.
Deposit date:2000-02-07
Release date:2000-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure of cathepsin X: a flip-flop of the ring of His23 allows carboxy-monopeptidase and carboxy-dipeptidase activity of the protease.
Structure Fold.Des., 8, 2000
7U9I
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BU of 7u9i by Molmil
Co-crystal structure of human CARM1 in complex with MT556 inhibitor
Descriptor: 7-[5-S-(4-{[(4-ethylpyridin-3-yl)methyl]amino}butyl)-5-thio-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Histone-arginine methyltransferase CARM1, UNKNOWN ATOM OR ION
Authors:Zeng, H, Perveen, S, Dong, A, Hutchinson, A, Seitova, A, Gibson, E, Hajian, T, Li, Y, Gao, Y.D, Schneider, S, Siliphaivanh, P, Sloman, D, Nicholson, B, Fischer, C, Hicks, J, Vedadi, M, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2022-03-10
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Co-crystal structure of human CARM1 in complex with MT556 inhibitor
To Be Published
2MI7
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BU of 2mi7 by Molmil
Solution NMR structure of alpha3Y
Descriptor: de novo protein a3Y
Authors:Glover, S.D, Jorge, C, Liang, L, Valentine, K.G, Hammarstrom, L, Tommos, C.
Deposit date:2013-12-10
Release date:2014-08-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Photochemical tyrosine oxidation in the structurally well-defined alpha 3Y protein: proton-coupled electron transfer and a long-lived tyrosine radical.
J.Am.Chem.Soc., 136, 2014
2AA1
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BU of 2aa1 by Molmil
Crystal structure of the cathodic hemoglobin isolated from the Antarctic fish Trematomus Newnesi
Descriptor: Hemoglobin alpha-1 chain, Hemoglobin beta-C chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mazzarella, L, Bonomi, G, Lubrano, M.C, Merlino, A, Riccio, A, Vergara, A, Vitagliano, L, Verde, C, Di Prisco, G.
Deposit date:2005-07-13
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Minimal structural requirements for root effect: crystal structure of the cathodic hemoglobin isolated from the antarctic fish Trematomus newnesi
Proteins, 62, 2006
1R5D
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BU of 1r5d by Molmil
X-ray structure of bovine seminal ribonuclease swapping dimer from a new crystal form
Descriptor: Ribonuclease, seminal
Authors:Merlino, A, Vitagliano, L, Sica, F, Zagari, A, Mazzarella, L.
Deposit date:2003-10-10
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Population shift vs induced fit: The case of bovine seminal ribonuclease swapping dimer
Biopolymers, 73, 2004
1R5C
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BU of 1r5c by Molmil
X-ray structure of the complex of Bovine seminal ribonuclease swapping dimer with d(CpA)
Descriptor: 2'-DEOXYCYTIDINE-2'-DEOXYADENOSINE-3',5'-MONOPHOSPHATE, Ribonuclease, seminal
Authors:Merlino, A, Vitagliano, L, Sica, F, Zagari, A, Mazzarella, L.
Deposit date:2003-10-10
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Population shift vs induced fit: The case of bovine seminal ribonuclease swapping dimer
Biopolymers, 73, 2004
3TCO
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BU of 3tco by Molmil
Crystallographic and spectroscopic characterization of Sulfolobus solfataricus TrxA1 provide insights into the determinants of thioredoxin fold stability
Descriptor: 1,2-ETHANEDIOL, Thioredoxin (TrxA-1)
Authors:Esposito, L, Ruggiero, A, Masullo, M, Ruocco, M.R, Lamberti, A, Arcari, P, Zagari, A, Vitagliano, L.
Deposit date:2011-08-09
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and spectroscopic characterizations of Sulfolobus solfataricus TrxA1 provide insights into the determinants of thioredoxin fold stability.
J.Struct.Biol., 177, 2012
2LXY
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BU of 2lxy by Molmil
NMR structure of 2-MERCAPTOPHENOL-ALPHA3C
Descriptor: 2-MERCAPTOPHENOL, 2-mercaptophenol-alpha3C
Authors:Tommos, C, Valentine, K.G, Martinez-Rivera, M.C, Liang, L, Moorman, V.R.
Deposit date:2012-09-06
Release date:2013-02-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Reversible phenol oxidation and reduction in the structurally well-defined 2-Mercaptophenol-alpha(3)C protein.
Biochemistry, 52, 2013
7UW7
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BU of 7uw7 by Molmil
Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Isoform 2 of E3 ubiquitin-protein ligase TRIP12, UNKNOWN ATOM OR ION
Authors:Kimani, S, Dong, A, Li, Y, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2022-05-02
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ADP
To Be Published
7MEQ
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BU of 7meq by Molmil
Crystal structure of human TMPRSS2 in complex with Nafamostat
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-carbamimidamidobenzoic acid, Transmembrane protease serine 2, ...
Authors:Fraser, B, Beldar, S, Hutchinson, A, Li, Y, Seitova, A, Edwards, A.M, Benard, F, Arrowsmith, C.H, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2021-04-07
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and activity of human TMPRSS2 protease implicated in SARS-CoV-2 activation.
Nat.Chem.Biol., 18, 2022
4QBB
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BU of 4qbb by Molmil
Structure of the foot-and-mouth disease virus leader proteinase in complex with inhibitor (N~2~-[(3S)-4-({(2R)-1-[(4-CARBAMIMIDAMIDOBUTYL)AMINO]-4-METHYL-1-OXOPENTAN-2-YL}AMINO)-3-HYDROXY-4-OXOBUTANOYL]-L-ARGINYL-L-PROLINAMIDE)
Descriptor: Leader protease, N~2~-[(3S)-4-({(2R)-1-[(4-carbamimidamidobutyl)amino]-4-methyl-1-oxopentan-2-yl}amino)-3-hydroxy-4-oxobutanoyl]-L-arginyl-L-prolinamide, PHOSPHATE ION, ...
Authors:Grishkovskaya, I, Steinberger, J, Cencic, R, Juliano, M.A, Juliano, L, Skern, T.
Deposit date:2014-05-07
Release date:2014-11-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Foot-and-mouth disease virus leader proteinase: Structural insights into the mechanism of intermolecular cleavage.
Virology, 468-470C, 2014

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数据于2024-07-24公开中

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