Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 400 results

6XM3
DownloadVisualize
BU of 6xm3 by Molmil
Structure of SARS-CoV-2 spike at pH 5.5, single RBD up, conformation 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhou, T, Tsybovsky, Y, Olia, A, Kwong, P.D.
Deposit date:2020-06-29
Release date:2020-08-12
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains.
Cell Host Microbe, 28, 2020
2DU1
DownloadVisualize
BU of 2du1 by Molmil
Crystal Structure of basic winged bean lectin in complex with Methyl-alpha-N-acetyl-D galactosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2006-07-19
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DH1
DownloadVisualize
BU of 2dh1 by Molmil
Crystal structure of peanut lectin lactose-azobenzene-4,4'-dicarboxylic acid-lactose complex
Descriptor: Galactose-binding lectin
Authors:Natchiar, S.K, Srinivas, O, Nivedita, M, Sagarika, D, Jayaraman, N, Surolia, A, Vijayan, M.
Deposit date:2006-03-17
Release date:2006-08-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (7.65 Å)
Cite:Multivalency in lectins - A crystallographic, modelling and light-scattering study involving peanut lectin and a bivalent ligand
Curr.Sci., 90, 2006
2DVB
DownloadVisualize
BU of 2dvb by Molmil
Crystal structure of peanut lectin GAl-beta-1,6-GalNAc complex
Descriptor: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
Authors:Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
Deposit date:2006-07-30
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
6WIX
DownloadVisualize
BU of 6wix by Molmil
Crystal Structure of HIV-1 MI369 RnS-DS.SOSIP Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lai, Y.-T, Olia, A, Kwong, P.D.
Deposit date:2020-04-10
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Automated Design by Structure-Based Stabilization and Consensus Repair to Achieve Prefusion-Closed Envelope Trimers in a Wide Variety of HIV Strains.
Cell Rep, 33, 2020
2BW1
DownloadVisualize
BU of 2bw1 by Molmil
Iron-bound crystal structure of Dps-like peroxide resistance protein (Dpr) from Streptococcus suis.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, DPS-LIKE PEROXIDE RESISTANCE PROTEIN, ...
Authors:Kauko, A, Pulliainen, A, Haataja, S, Finne, J, Papageorgiou, A.C.
Deposit date:2005-07-07
Release date:2006-09-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core.
J. Mol. Biol., 364, 2006
2DVF
DownloadVisualize
BU of 2dvf by Molmil
Crystals of peanut lectin grown in the presence of GAL-ALPHA-1,3-GAL-BETA-1,4-GAL
Descriptor: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
Authors:Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
Deposit date:2006-07-31
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2CF7
DownloadVisualize
BU of 2cf7 by Molmil
Asp74Ala mutant crystal structure for Dps-like peroxide resistance protein Dpr from Streptococcus suis.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Kauko, A, Pulliainen, A.T, Haataja, S, Finne, J, Papageorgiou, A.C.
Deposit date:2006-02-16
Release date:2006-09-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core.
J. Mol. Biol., 364, 2006
2DVD
DownloadVisualize
BU of 2dvd by Molmil
Crystal structure of peanut lectin GAL-ALPHA-1,3-GAL complex
Descriptor: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
Authors:Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
Deposit date:2006-07-31
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DV9
DownloadVisualize
BU of 2dv9 by Molmil
Crystal structure of peanut lectin GAL-BETA-1,3-GAL complex
Descriptor: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
Authors:Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
Deposit date:2006-07-30
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DTY
DownloadVisualize
BU of 2dty by Molmil
Crystal structure of basic winged bean lectin complexed with N-acetyl-D-galactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Basic agglutinin, CALCIUM ION, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2006-07-19
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DVA
DownloadVisualize
BU of 2dva by Molmil
Crystal structure of peanut lectin GAL-BETA-1,3-GALNAC-ALPHA-O-ME (Methyl-T-antigen) complex
Descriptor: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
Authors:Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
Deposit date:2006-07-30
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DTW
DownloadVisualize
BU of 2dtw by Molmil
Crystal Structure of basic winged bean lectin in complex with 2Me-O-D-Galactose
Descriptor: 2-O-methyl-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2006-07-18
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DVG
DownloadVisualize
BU of 2dvg by Molmil
Crystal structure of peanut lectin GAL-ALPHA-1,6-GLC complex
Descriptor: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
Authors:Natchiar, S.K, Srinivas, O, Mitra, N, Surolia, A, Jayaraman, N, Vijayan, M.
Deposit date:2006-07-31
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structural studies on peanut lectin complexed with disaccharides involving different linkages: further insights into the structure and interactions of the lectin
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DU0
DownloadVisualize
BU of 2du0 by Molmil
Crystal structure of basic winged bean lectin in complex with Alpha-D-galactose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, CALCIUM ION, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2006-07-19
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the carbohydrate-specificity of basic winged-bean lectin and its differential affinity for Gal and GalNAc
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2E51
DownloadVisualize
BU of 2e51 by Molmil
Crystal structure of basic winged bean lectin in complex with A blood group disaccharide
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2006-12-18
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Generation of blood group specificity: new insights from structural studies on the complexes of A- and B-reactive saccharides with basic winged bean agglutinin.
Proteins, 68, 2007
2E7T
DownloadVisualize
BU of 2e7t by Molmil
Crystal structure of basic winged bean lectin in complex with a blood group trisaccharide
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2007-01-13
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Generation of blood group specificity: New insights from structural studies on the complexes of A- and B-reactive saccharides with basic winged bean agglutinin
Proteins, 68, 2007
2E53
DownloadVisualize
BU of 2e53 by Molmil
Crystal structure of basic winged bean lectin in complex with B blood group disaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, CALCIUM ION, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2006-12-18
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Generation of blood group specificity: new insights from structural studies on the complexes of A- and B-reactive saccharides with basic winged bean agglutinin.
Proteins, 68, 2007
2E7Q
DownloadVisualize
BU of 2e7q by Molmil
Crystal structure of basic winged bean lectin in complex with b blood group trisaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic agglutinin, CALCIUM ION, ...
Authors:Kulkarni, K.A, Katiyar, S, Surolia, A, Vijayan, M, Suguna, K.
Deposit date:2007-01-12
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Generation of blood group specificity: New insights from structural studies on the complexes of A- and B-reactive saccharides with basic winged bean agglutinin
Proteins, 68, 2007
6YNQ
DownloadVisualize
BU of 6ynq by Molmil
Structure of SARS-CoV-2 Main Protease bound to 2-Methyl-1-tetralone.
Descriptor: (2~{S})-2-methyl-3,4-dihydro-2~{H}-naphthalen-1-one, 3C-like proteinase, CHLORIDE ION, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-04-14
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
3LT4
DownloadVisualize
BU of 3lt4 by Molmil
Enoyl-ACP Reductase from Plasmodium falciparum (PfENR) in complex with triclosan variant PB4
Descriptor: 2-(2-amino-4-chlorophenoxy)-5-chlorophenol, Enoyl-ACP reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Maity, K, Bhargav, S.P, Surolia, N, Surolia, A, Suguna, K.
Deposit date:2010-02-15
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:X-ray crystallographic analysis of the complexes of enoyl acyl carrier protein reductase of Plasmodium falciparum with triclosan variants to elucidate the importance of different functional groups in enzyme inhibition
Iubmb Life, 62, 2010
3LT2
DownloadVisualize
BU of 3lt2 by Molmil
Enoyl-ACP Reductase from Plasmodium falciparum (PfENR) in complex with triclosan variant T3
Descriptor: 2-(2,4-dichlorophenoxy)-5-(hydroxymethyl)phenol, Enoyl-ACP reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Maity, K, Bhargav, S.P, Surolia, N, Surolia, A, Suguna, K.
Deposit date:2010-02-14
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray crystallographic analysis of the complexes of enoyl acyl carrier protein reductase of Plasmodium falciparum with triclosan variants to elucidate the importance of different functional groups in enzyme inhibition
Iubmb Life, 62, 2010
3LT1
DownloadVisualize
BU of 3lt1 by Molmil
Enoyl-ACP Reductase from Plasmodium falciparum (PfENR) in complex with triclosan variant T2
Descriptor: 5-(chloromethyl)-2-(2,4-dichlorophenoxy)phenol, Enoyl-ACP reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Maity, K, Bhargav, S.P, Sankaran, B, Surolia, N, Surolia, A, Suguna, K.
Deposit date:2010-02-14
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystallographic analysis of the complexes of enoyl acyl carrier protein reductase of Plasmodium falciparum with triclosan variants to elucidate the importance of different functional groups in enzyme inhibition
Iubmb Life, 62, 2010
3LT0
DownloadVisualize
BU of 3lt0 by Molmil
Enoyl-ACP Reductase from Plasmodium falciparum (PfENR) in complex with triclosan variant T1
Descriptor: 4-(2,4-dichlorophenoxy)-3-hydroxybenzaldehyde, Enoyl-ACP reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Maity, K, Bhargav, S.P, Sankaran, B, Surolia, N, Surolia, A, Suguna, K.
Deposit date:2010-02-14
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:X-ray crystallographic analysis of the complexes of enoyl acyl carrier protein reductase of Plasmodium falciparum with triclosan variants to elucidate the importance of different functional groups in enzyme inhibition
Iubmb Life, 62, 2010
3LSY
DownloadVisualize
BU of 3lsy by Molmil
Enoyl-ACP Reductase from Plasmodium falciparum (PfENR) in complex with triclosan variant T0
Descriptor: 3-hydroxy-4-phenoxybenzaldehyde, Enoyl-ACP reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Maity, K, Bhargav, S.P, Surolia, N, Surolia, A, Suguna, K.
Deposit date:2010-02-14
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:X-ray crystallographic analysis of the complexes of enoyl acyl carrier protein reductase of Plasmodium falciparum with triclosan variants to elucidate the importance of different functional groups in enzyme inhibition
Iubmb Life, 62, 2010

223532

數據於2024-08-07公開中

PDB statisticsPDBj update infoContact PDBjnumon