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PDB: 463 results

8HCA
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BU of 8hca by Molmil
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (1 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB13-292 Fab, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (4.35 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
8HC6
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BU of 8hc6 by Molmil
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with YB9-258 Fab, focused refinement of Fab region
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB9-258 Fab, Light chain of YB9-258, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (4.69 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
7V55
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BU of 7v55 by Molmil
Crystal structure of phospholipase D from Pseudomonas aeruginosa PAO1 using in situ proteolysis
Descriptor: CALCIUM ION, Phospholipase D
Authors:Yang, Y, Li, Z.
Deposit date:2021-08-16
Release date:2022-08-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into PA3488-mediated inactivation of Pseudomonas aeruginosa PldA.
Nat Commun, 13, 2022
7V53
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BU of 7v53 by Molmil
Crystal structure of full-length phospholipase D from Pseudomonas aeruginosa PAO1
Descriptor: Phospholipase D
Authors:Yang, Y, Li, Z.
Deposit date:2021-08-16
Release date:2022-08-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into PA3488-mediated inactivation of Pseudomonas aeruginosa PldA.
Nat Commun, 13, 2022
7YNY
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BU of 7yny by Molmil
Crystal structure of baculovirus LEF-3 from Helicoverpa armigera nucleopolyhedrovirus
Descriptor: Lef3
Authors:Yin, J, Li, Z, Cao, S.
Deposit date:2022-08-01
Release date:2023-01-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA.
Nucleic Acids Res., 50, 2022
7YPO
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BU of 7ypo by Molmil
Cryo-EM structure of baculovirus LEF-3 in complex with ssDNA
Descriptor: DNA (28-MER), Lef3
Authors:Yin, J, Fu, Y, Rao, G, Li, Z, Cao, S.
Deposit date:2022-08-04
Release date:2023-01-25
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA.
Nucleic Acids Res., 50, 2022
7YPQ
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BU of 7ypq by Molmil
Cryo-EM structure of one baculovirus LEF-3 molecule in complex with ssDNA
Descriptor: DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Lef3
Authors:Fu, Y, Rao, G, Yin, J, Li, Z, Cao, S.
Deposit date:2022-08-04
Release date:2023-01-25
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA.
Nucleic Acids Res., 50, 2022
8HC9
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BU of 8hc9 by Molmil
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (3 RBD down)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB13-292 Fab, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (6.03 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
8HC2
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BU of 8hc2 by Molmil
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 1 YB9-258 Fab (1 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB9-258 Fab, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (6.21 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
8XKN
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BU of 8xkn by Molmil
Cryo-EM structure of tail tube protein
Descriptor: a protein
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-12-23
Release date:2024-05-01
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Insights into the modulation of bacterial NADase activity by phage proteins.
Nat Commun, 15, 2024
7WNU
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BU of 7wnu by Molmil
Mycobacterium tuberculosis Rnase J complex with 7nt RNA
Descriptor: RNA (5'-R(P*AP*AP*AP*AP*AP*AP*A)-3'), Ribonuclease J, ZINC ION
Authors:Li, J, Hu, J, Bao, L, Zhan, B, Li, Z.
Deposit date:2022-01-19
Release date:2023-01-25
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into RNase J that plays an essential role in Mycobacterium tuberculosis RNA metabolism
Nat Commun, 14, 2023
7WNT
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BU of 7wnt by Molmil
RNase J from Mycobacterium tuberculosis
Descriptor: Ribonuclease J, ZINC ION
Authors:Li, J, Bao, L, Hu, J, Zhan, B, Li, Z.
Deposit date:2022-01-19
Release date:2023-01-25
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural insights into RNase J that plays an essential role in Mycobacterium tuberculosis RNA metabolism
Nat Commun, 14, 2023
8JJ3
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BU of 8jj3 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 2.5
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-05-29
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.6476 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
8WFN
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BU of 8wfn by Molmil
Cryo-EM structure of DSR2-TTP
Descriptor: SIR2-like domain-containing protein, tail tube protein(TTP)
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-09-19
Release date:2024-05-01
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.48 Å)
Cite:Cryo-EM structure of DSR2-TTP
To Be Published
6LQA
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BU of 6lqa by Molmil
voltage-gated sodium channel Nav1.5 with quinidine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Quinidine, Sodium channel protein type 5 subunit alpha
Authors:Yan, N, Li, Z, Pan, X, Huang, G.
Deposit date:2020-01-13
Release date:2021-03-24
Last modified:2021-05-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural Basis for Pore Blockade of the Human Cardiac Sodium Channel Na v 1.5 by the Antiarrhythmic Drug Quinidine*.
Angew.Chem.Int.Ed.Engl., 60, 2021
8WCK
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BU of 8wck by Molmil
FCP tetramer in Chaetoceros gracilis
Descriptor: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, CHLOROPHYLL A, Chlorophyll a/b-binding protein, ...
Authors:Feng, Y, Li, Z, Zhou, C, Shen, J.-R, Liu, C, Wang, W.
Deposit date:2023-09-12
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural and spectroscopic insights into fucoxanthin chlorophyll a/c-binding proteins of diatoms in diverse oligomeric states.
Plant Commun., 2024
8WCL
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BU of 8wcl by Molmil
FCP pentamer in Chaetoceros gracilis
Descriptor: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, CHLOROPHYLL A, ...
Authors:Feng, Y, Li, Z, Zhou, C, Liu, C, Shen, J.-R, Wang, W.
Deposit date:2023-09-12
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Structural and spectroscopic insights into fucoxanthin chlorophyll a/c-binding proteins of diatoms in diverse oligomeric states.
Plant Commun., 2024
7W8N
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BU of 7w8n by Molmil
Microbial Hormone-sensitive lipase E53 wild type
Descriptor: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Yang, X, Li, Z, Xu, X, Li, J.
Deposit date:2021-12-08
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus .
Front Microbiol, 12, 2021
8WK0
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BU of 8wk0 by Molmil
Cryo-EM structure of a bacterial protein
Descriptor: Helicase HerA central domain-containing protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Yu, G, Liao, F, Li, X, Li, Z, Zhang, H.
Deposit date:2023-09-26
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryo-EM structure of a bacterial protein
To Be Published
8WOD
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BU of 8wod by Molmil
Cryo-EM structure of SIR2/HerA complex
Descriptor: Helicase HerA central domain-containing protein, SIR2-like domain-containing protein
Authors:Yu, G, Liao, F, Li, X, Li, Z, Zhang, H.
Deposit date:2023-10-07
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Cryo-EM structure of a bacterial protein
To Be Published
8WLD
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BU of 8wld by Molmil
Cryo-EM structure of SIR2/HerA antiphage complex
Descriptor: Helicase HerA central domain-containing protein, SIR2-like domain-containing protein
Authors:Yu, G, Liao, F, Li, X, Li, Z, Zhang, H.
Deposit date:2023-09-29
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Cryo-EM structure of SIR2/HerA antiphage complex
To Be Published
8WOC
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BU of 8woc by Molmil
Cryo-EM structure of SIR2/HerA complex
Descriptor: Helicase HerA central domain-containing protein, SIR2-like domain-containing protein
Authors:Yu, G, Liao, F, Li, X, Li, Z, Zhang, H.
Deposit date:2023-10-07
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Cryo-EM structure of a bacterial protein
To Be Published
8W9L
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BU of 8w9l by Molmil
Cryo-EM structure of PsSIR2
Descriptor: SIR2-like domain-containing protein
Authors:Yu, G, Liao, F, Li, X, Li, Z, Zhang, H.
Deposit date:2023-09-05
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of PsSIR2
To Be Published
8WJ3
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BU of 8wj3 by Molmil
Cryo-EM structure of a bacterial protein
Descriptor: Helicase HerA central domain-containing protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Yu, G, Liao, F, Li, X, Li, Z, Zhang, H.
Deposit date:2023-09-25
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Cryo-EM structure of a bacterial protein
To Be Published
8WIV
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BU of 8wiv by Molmil
Cryo-EM structure of a bacterial protein
Descriptor: Helicase HerA central domain-containing protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Yu, G, Liao, F, Li, X, Li, Z, Zhang, H.
Deposit date:2023-09-25
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Cryo-EM structure of a bacterial protein
To Be Published

225946

數據於2024-10-09公開中

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