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PDB: 164 results

1SVK
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BU of 1svk by Molmil
Structure of the K180P mutant of Gi alpha subunit bound to AlF4 and GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
Authors:Thomas, C.J, Du, X, Li, P, Wang, Y, Ross, E.M, Sprang, S.R.
Deposit date:2004-03-29
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Uncoupling conformational change from GTP hydrolysis in a heterotrimeric G protein {alpha}-subunit.
Proc.Natl.Acad.Sci.USA, 101, 2004
5JER
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BU of 5jer by Molmil
Structure of Rotavirus NSP1 bound to IRF-3
Descriptor: Interferon regulatory factor 3, Rotavirus NSP1 peptide
Authors:Zhao, B, Li, P.
Deposit date:2016-04-18
Release date:2016-06-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.913 Å)
Cite:Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
5JEL
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BU of 5jel by Molmil
Phosphorylated TRIF in complex with IRF-3
Descriptor: Interferon regulatory factor 3, Phosphorylated TRIF peptide
Authors:Zhao, B, Li, P.
Deposit date:2016-04-18
Release date:2016-06-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
5JEO
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BU of 5jeo by Molmil
Phosphorylated Rotavirus NSP1 in complex with IRF-3
Descriptor: Interferon regulatory factor 3, PHOSPHATE ION, Rotavirus NSP1 peptide
Authors:Zhao, B, Li, P.
Deposit date:2016-04-18
Release date:2016-06-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.719 Å)
Cite:Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
1SVS
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BU of 1svs by Molmil
Structure of the K180P mutant of Gi alpha subunit bound to GppNHp.
Descriptor: Guanine nucleotide-binding protein G(i), alpha-1 subunit, MAGNESIUM ION, ...
Authors:Thomas, C.J, Du, X, Li, P, Wang, Y, Ross, E.M, Sprang, S.R.
Deposit date:2004-03-29
Release date:2004-06-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Uncoupling conformational change from GTP hydrolysis in a heterotrimeric G protein {alpha}-subunit.
Proc.Natl.Acad.Sci.USA, 101, 2004
3FKY
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BU of 3fky by Molmil
Crystal structure of the glutamine synthetase Gln1deltaN18 from the yeast Saccharomyces cerevisiae
Descriptor: CITRATE ANION, Glutamine synthetase
Authors:He, Y.X, Gui, L, Liu, Y.Z, Du, Y, Zhou, Y.Y, Li, P, Zhou, C.Z.
Deposit date:2008-12-18
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of Saccharomyces cerevisiae glutamine synthetase Gln1 suggests a nanotube-like supramolecular assembly
Proteins, 76, 2009
7K2V
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BU of 7k2v by Molmil
PIKfyve/Fig4/Vac14 complex centered on PIKfyve - map2
Descriptor: 1-phosphatidylinositol 3-phosphate 5-kinase
Authors:Lees, J.A, Reinisch, K.M, Li, P.
Deposit date:2020-09-09
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Insights into Lysosomal PI(3,5)P 2 Homeostasis from a Structural-Biochemical Analysis of the PIKfyve Lipid Kinase Complex.
Mol.Cell, 80, 2020
7K1W
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BU of 7k1w by Molmil
PIKfyve/Fig4/Vac14 complex centered on Fig4 - map3
Descriptor: Fig4 Sac homology model
Authors:Lees, J.A, Reinisch, K.M, Li, P.
Deposit date:2020-09-08
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Insights into Lysosomal PI(3,5)P 2 Homeostasis from a Structural-Biochemical Analysis of the PIKfyve Lipid Kinase Complex.
Mol.Cell, 80, 2020
7K1Y
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BU of 7k1y by Molmil
PIKfyve/Fig4/Vac14 complex centered on Vac14 - map1
Descriptor: Vac14
Authors:Lees, J.A, Reinisch, K.M, Li, P.
Deposit date:2020-09-08
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.25 Å)
Cite:Insights into Lysosomal PI(3,5)P 2 Homeostasis from a Structural-Biochemical Analysis of the PIKfyve Lipid Kinase Complex.
Mol.Cell, 80, 2020
5UL6
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BU of 5ul6 by Molmil
The molecular mechanisms by which NS1 of the 1918 Spanish influenza A virus hijack host protein-protein interactions
Descriptor: Adapter molecule crk, Proline-rich motif of nonstructural protein 1 of influenza a virus
Authors:Shen, Q, Zeng, D, Zhao, B, Li, P, Cho, J.H.
Deposit date:2017-01-24
Release date:2017-08-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Molecular Mechanisms Underlying the Hijack of Host Proteins by the 1918 Spanish Influenza Virus.
ACS Chem. Biol., 12, 2017
5VJ0
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BU of 5vj0 by Molmil
Crystal Structure of heme-containing DyP Type Peroxidase from Enterobacter lignolyticus
Descriptor: Dyp-type peroxidase family, PROTOPORPHYRIN IX CONTAINING FE
Authors:Meekins, D.A, Li, P, Geisbrecht, B.V.
Deposit date:2017-04-17
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Mechanistic Insights into Dye-Decolorizing Peroxidase Revealed by Solvent Isotope and Viscosity Effects.
ACS Catal, 7, 2017
5W4Y
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BU of 5w4y by Molmil
Crystal Structure of Riboflavin Lyase (RcaE) with cofactor FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Riboflavin Lyase
Authors:Bhandari, D.M, Chakrabarty, Y, Zhao, B, Wood, J, Li, P, Begley, T.P.
Deposit date:2017-06-13
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cannibalism Among the Flavins: a Novel C-N Bond Cleavage in Riboflavin Catabolism Mediated by Flavin-Generated Superoxide Radical
To be Published
4IDU
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BU of 4idu by Molmil
crystal structure of Schmallenberg virus nucleoprotein
Descriptor: SBV nucleoprotein
Authors:Dong, H, Li, P, Elliott, R.M, Dong, C.
Deposit date:2012-12-13
Release date:2013-04-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Structure of Schmallenberg orthobunyavirus nucleoprotein suggests a novel mechanism of genome encapsidation
J.Virol., 87, 2013
5W4Z
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BU of 5w4z by Molmil
Crystal Structure of Riboflavin Lyase (RcaE) with modified FMN and substrate Riboflavin
Descriptor: 1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)-3-O-phosphono-D-ribitol, RIBOFLAVIN, Riboflavin Lyase
Authors:Bhandari, D.M, Chakrabarty, Y, Zhao, B, Wood, J, Li, P, Begley, T.P.
Deposit date:2017-06-13
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Cannibalism Among the Flavins: a Novel C-N Bond Cleavage in Riboflavin Catabolism Mediated by Flavin-Generated Superoxide Radical
To be Published
5W48
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BU of 5w48 by Molmil
Crystal Structure of Riboflavin Lyase (RcaE)
Descriptor: Riboflavin Lyase, SULFATE ION
Authors:Bhandari, D.M, Chakrabarty, Y, Zhao, B, Wood, J, Li, P, Begley, T.P.
Deposit date:2017-06-09
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cannibalism Among the Flavins: a Novel C-N Bond Cleavage in Riboflavin Catabolism Mediated by Flavin-Generated Superoxide Radical
To be Published
3NMQ
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BU of 3nmq by Molmil
Hsp90b N-terminal domain in complex with EC44, a pyrrolo-pyrimidine methoxypyridine inhibitor
Descriptor: 5-{2-amino-4-chloro-7-[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidin-5-yl}-2-methylpent-4-yn-2 -ol, Heat shock protein HSP 90-beta
Authors:Arndt, J.W, Yun, T.J, Harning, E.K, Giza, K, Rabah, D, Li, P, Luchetti, D, Shi, J, Manning, A, Kehry, M.R.
Deposit date:2010-06-22
Release date:2010-12-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:EC144, a Synthetic Inhibitor of Heat Shock Protein 90, Blocks Innate and Adaptive Immune Responses in Models of Inflammation and Autoimmunity.
J.Immunol., 186, 2011
1AU7
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BU of 1au7 by Molmil
PIT-1 MUTANT/DNA COMPLEX
Descriptor: CONSENSUS DNA 25-MER, DNA (5'-D(*CP*TP*TP*CP*CP*TP*CP*AP*TP*GP*TP*AP*TP*AP*TP*AP*C P*AP*TP*GP*AP*GP* GP*A)-3'), PROTEIN PIT-1
Authors:Jacobson, E.M, Li, P, Leon-Del-Rio, A, Rosenfeld, M.G, Aggarwal, A.K.
Deposit date:1997-09-12
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Pit-1 POU domain bound to DNA as a dimer: unexpected arrangement and flexibility.
Genes Dev., 11, 1997
6IZD
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BU of 6izd by Molmil
Crystal structure of the chromosome-encoded beta-lactamase mutant R168H/M221I of Vibrio parahaemolyticus
Descriptor: Beta-lactamase, GLYCEROL
Authors:Ma, Q, Li, P.
Deposit date:2018-12-19
Release date:2019-12-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the CARB beta-lactamase from Vibrio parahaemolyticus facilitates application of the beta-lactam/ beta-lactamase inhibitor therapy.
Biochimie, 171-172, 2020
8VVC
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BU of 8vvc by Molmil
Cryo-EM structure of human ABC transporter (hABCC1) with nucleotide-binding domain 2
Descriptor: Multidrug resistance-associated protein 1
Authors:Shinde, O, Li, P.
Deposit date:2024-01-30
Release date:2024-12-25
Last modified:2025-01-29
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Structures of ATP-binding cassette transporter ABCC1 reveal the molecular basis of cyclic dinucleotide cGAMP export.
Immunity, 58, 2025
8VUX
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BU of 8vux by Molmil
Cryo-EM structure of human ABC transporter (hABCC1) bound to cGAMP
Descriptor: CHOLESTEROL HEMISUCCINATE, Multidrug resistance-associated protein 1, cGAMP
Authors:Shinde, O, Li, P.
Deposit date:2024-01-30
Release date:2024-12-25
Last modified:2025-01-29
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Structures of ATP-binding cassette transporter ABCC1 reveal the molecular basis of cyclic dinucleotide cGAMP export.
Immunity, 58, 2025
6IZC
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BU of 6izc by Molmil
Crystal structure of the chromosome-encoded beta-lactamase of Vibrio parahaemolyticus
Descriptor: Beta-lactamase, PENTAETHYLENE GLYCOL, SULFATE ION
Authors:Ma, Q, Li, P.
Deposit date:2018-12-19
Release date:2019-12-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural analysis of the CARB beta-lactamase from Vibrio parahaemolyticus facilitates application of the beta-lactam/ beta-lactamase inhibitor therapy.
Biochimie, 171-172, 2020
7F09
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BU of 7f09 by Molmil
Crystal structure of the HLH-Lz domain of human TFE3
Descriptor: 1,2-ETHANEDIOL, Transcription factor E3, ZINC ION
Authors:Yang, G, Li, P, Liu, Z, Wu, S, Zhuang, C, Qiao, H, Fang, P, Wang, J.
Deposit date:2021-06-03
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the dimerization mechanism of human transcription factor E3.
Biochem.Biophys.Res.Commun., 569, 2021
8K52
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BU of 8k52 by Molmil
Cryo-EM structure of chitin synthase
Descriptor: MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, chitin synthase
Authors:Zhang, X, Niu, S, Li, P, Bi, Y.
Deposit date:2023-07-20
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Chitin Translocation Is Functionally Coupled with Synthesis in Chitin Synthase.
Int J Mol Sci, 25, 2024
4L1L
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BU of 4l1l by Molmil
Rat PKC C2 domain bound to CD
Descriptor: CADMIUM ION, Protein kinase C alpha type, SULFATE ION
Authors:Morales, K.M, Yang, Y, Long, Z, Li, P, Taylor, A.B, Hart, P.J, Igumenova, T.I.
Deposit date:2013-06-03
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cd(2+) as a ca(2+) surrogate in protein-membrane interactions: isostructural but not isofunctional.
J.Am.Chem.Soc., 135, 2013
4JNG
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BU of 4jng by Molmil
Schmallenberg virus nucleoprotein-RNA complex
Descriptor: Nucleocapsid protein, RNA (42-MER)
Authors:Dong, H.H, Li, P, Bottcher, B, Elliott, R.M, Dong, C.J.
Deposit date:2013-03-15
Release date:2013-07-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of Schmallenberg orthobunyavirus nucleoprotein-RNA complex reveals a novel RNA sequestration mechanism.
Rna, 19, 2013

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