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PDB: 484 results

7VXY
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Zika virus NS2B/NS3 protease bZipro(C143S) in complex with D-RKOR
Descriptor: Peptide inhibitor, Serine protease NS3, Serine protease subunit NS2B
Authors:Xiong, Y.C, Cheng, F, Zhang, J.Y, Su, H.X, Hu, H.C, Zou, Y, Li, M.J, Xu, Y.C.
Deposit date:2021-11-13
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structure-based design of a novel inhibitor of the ZIKA virus NS2B/NS3 protease.
Bioorg.Chem., 128, 2022
6JVY
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Crystal structure of RBM38 in complex with single-stranded DNA
Descriptor: DNA (5'-D(*TP*GP*TP*GP*TP*GP*TP*GP*TP*GP*TP*G)-3'), RNA-binding protein 38, SULFATE ION
Authors:Qian, K, Li, M, Wang, J, Zhang, M, Wang, M.
Deposit date:2019-04-17
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural basis for mRNA recognition by human RBM38.
Biochem.J., 477, 2020
7X6K
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SARS-CoV-2 3CL protease (3CLpro) in complex with compound 3w
Descriptor: 1H-indole-2-carbaldehyde, 3C-like proteinase
Authors:Su, H, Nie, T, Xie, H, Li, Z.W, Li, M.J, Xu, Y.
Deposit date:2022-03-07
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Small-Molecule Thioesters as SARS-CoV-2 Main Protease Inhibitors: Enzyme Inhibition, Structure-Activity Relationships, Antiviral Activity, and X-ray Structure Determination.
J.Med.Chem., 65, 2022
7X6J
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SARS-CoV-2 3CL protease (3CLpro) in complex with compound 3af
Descriptor: 3C-like proteinase, quinoline-2-carboxylic acid
Authors:Su, H, Nie, T, Xie, H, Li, Z.W, Li, M.J, Xu, Y.
Deposit date:2022-03-07
Release date:2022-07-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Small-Molecule Thioesters as SARS-CoV-2 Main Protease Inhibitors: Enzyme Inhibition, Structure-Activity Relationships, Antiviral Activity, and X-ray Structure Determination.
J.Med.Chem., 65, 2022
6LJS
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BU of 6ljs by Molmil
Crystal structure of human FABP4 in complex with a novel inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-[(2-phenylphenyl)amino]benzoic acid, Fatty acid-binding protein, ...
Authors:Su, H.X, Zhang, X.L, Li, M.J, Xu, Y.C.
Deposit date:2019-12-17
Release date:2020-04-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Exploration of Fragment Binding Poses Leading to Efficient Discovery of Highly Potent and Orally Effective Inhibitors of FABP4 for Anti-inflammation.
J.Med.Chem., 63, 2020
6JON
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Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, Primase
Authors:Guo, H.J, Li, M.J, Wu, H, Yu, F, He, J.H.
Deposit date:2019-03-22
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structures of phage NrS-1 N300-dNTPs-Mg2+complex provide molecular mechanisms for substrate specificity.
Biochem.Biophys.Res.Commun., 515, 2019
6JOP
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BU of 6jop by Molmil
Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity
Descriptor: MAGNESIUM ION, Primase, THYMIDINE-5'-TRIPHOSPHATE
Authors:Guo, H.J, Li, M.J, Wu, H, Yu, F, He, J.H.
Deposit date:2019-03-22
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.353 Å)
Cite:Crystal structures of phage NrS-1 N300-dNTPs-Mg2+complex provide molecular mechanisms for substrate specificity.
Biochem.Biophys.Res.Commun., 515, 2019
4R4Z
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Structure of PNGF-II in P21 space group
Descriptor: PNGF-II
Authors:Sun, G, Yu, X, Celimuge, Wang, L, Li, M, Gan, J, Qu, D, Ma, J, Chen, L.
Deposit date:2014-08-20
Release date:2015-01-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Identification and Characterization of a Novel Prokaryotic Peptide: N-glycosidase from Elizabethkingia meningoseptica
J.Biol.Chem., 2015
5XNN
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Structure of M-LHCII and CP24 complexes in the stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
4IX3
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Crystal structure of a Stt7 homolog from Micromonas algae
Descriptor: MAGNESIUM ION, MsStt7d protein
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
4IX5
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Crystal structure of a Stt7 homolog from Micromonas algae in complex with AMP-PNP
Descriptor: MAGNESIUM ION, MsStt7d protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
4IX6
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Crystal structure of a Stt7 homolog from Micromonas algae soaked with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MsStt7d protein
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
4IX4
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BU of 4ix4 by Molmil
Crystal structure of a Stt7 homolog from Micromonas algae in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MsStt7d protein
Authors:Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
Deposit date:2013-01-24
Release date:2013-10-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
6JZZ
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BU of 6jzz by Molmil
The crystal structure of AAR-C294S in complex with ADO.
Descriptor: Aldehyde decarbonylase, FE (II) ION, HEXADECAN-1-OL, ...
Authors:Zhang, H.M, Li, M, Gao, Y.
Deposit date:2019-05-04
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.011 Å)
Cite:Structural insights into catalytic mechanism and product delivery of cyanobacterial acyl-acyl carrier protein reductase.
Nat Commun, 11, 2020
7WKJ
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BU of 7wkj by Molmil
A COVID-19 T-cell response detection method based on a newly identified human CD8+ T cell epitope from SARS-CoV-2-Hubei Province, 2021.
Descriptor: Beta-2-microglobulin, LYS-THR-PHE-PRO-PRO-THR-GLU-PRO-LYS, MHC class I antigen
Authors:Zhang, J, Lu, D, Li, M, Liu, M.S, Yao, S.J, Zhan, J.B, Liu, J, Gao, G.F.
Deposit date:2022-01-10
Release date:2022-03-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A COVID-19 T-Cell Response Detection Method Based on a Newly Identified Human CD8 + T Cell Epitope from SARS-CoV-2 - Hubei Province, China, 2021.
China CDC Wkly, 4, 2022
6KHJ
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Supercomplex for electron transfer
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Pan, X, Cao, D, Xie, F, Zhang, X, Li, M.
Deposit date:2019-07-15
Release date:2020-02-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for electron transport mechanism of complex I-like photosynthetic NAD(P)H dehydrogenase.
Nat Commun, 11, 2020
7VVT
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BU of 7vvt by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with a covalent inhibitor
Descriptor: 3C-like proteinase, N-(3-chlorophenyl)-2-[(2R)-1-ethanoyl-3-oxidanylidene-piperazin-2-yl]ethanamide
Authors:Su, H, Nie, T, Li, M, Xu, Y.
Deposit date:2021-11-08
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:In silico screening-based discovery of novel covalent inhibitors of the SARS-CoV-2 3CL protease.
Eur.J.Med.Chem., 231, 2022
6JZQ
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BU of 6jzq by Molmil
The crystal structure of acyl-acyl carrier protein (acyl-ACP) reductase (AAR)
Descriptor: Long-chain acyl-[acyl-carrier-protein] reductase
Authors:Zhang, H.M, Li, M, Gao, Y.
Deposit date:2019-05-03
Release date:2020-04-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Structural insights into catalytic mechanism and product delivery of cyanobacterial acyl-acyl carrier protein reductase.
Nat Commun, 11, 2020
6JZY
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Crystal structure of AAR with NADPH and stearyl in complex with ADO binding a long chain carbohydrate
Descriptor: Aldehyde decarbonylase, FE (II) ION, HEXADECAN-1-OL, ...
Authors:Zhang, H.M, Li, M, Gao, Y.
Deposit date:2019-05-04
Release date:2020-04-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into catalytic mechanism and product delivery of cyanobacterial acyl-acyl carrier protein reductase.
Nat Commun, 11, 2020
6JZU
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BU of 6jzu by Molmil
The crystal structure of acyl-acyl carrier protein (acyl-ACP) reductase (AAR) in complex with aldehyde deformylating oxygenase (ADO)
Descriptor: Aldehyde decarbonylase, FE (II) ION, HEXADECAN-1-OL, ...
Authors:Zhang, H.M, Li, M, Gao, Y.
Deposit date:2019-05-03
Release date:2020-04-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.181 Å)
Cite:Structural insights into catalytic mechanism and product delivery of cyanobacterial acyl-acyl carrier protein reductase.
Nat Commun, 11, 2020
5XNO
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BU of 5xno by Molmil
Structure of M-LHCII and CP24 complexes in the unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Su, X.D, Ma, J, Wei, X.P, Cao, P, Zhu, D.J, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex
Science, 357, 2017
6KEZ
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BU of 6kez by Molmil
Crystal structure of GAPDH/CP12/PRK complex from Arabidopsis thaliana
Descriptor: Calvin cycle protein CP12-2, Glyceraldehyde-3-phosphate dehydrogenase GAPA1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Yu, A, Xie, Y, Li, M.
Deposit date:2019-07-05
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Photosynthetic Phosphoribulokinase Structures: Enzymatic Mechanisms and the Redox Regulation of the Calvin-Benson-Bassham Cycle.
Plant Cell, 32, 2020
6KEV
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BU of 6kev by Molmil
Reduced phosphoribulokinase from Synechococcus elongatus PCC 7942 complexed with adenosine diphosphate and glucose 6-phosphate
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 6-O-phosphono-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Yu, A, Xie, Y, Li, M.
Deposit date:2019-07-05
Release date:2020-05-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.506139 Å)
Cite:Photosynthetic Phosphoribulokinase Structures: Enzymatic Mechanisms and the Redox Regulation of the Calvin-Benson-Bassham Cycle.
Plant Cell, 32, 2020
7EIZ
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BU of 7eiz by Molmil
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Descriptor: Helicase, MAGNESIUM ION, Non-structural protein 10, ...
Authors:Yan, L, Yang, Y.X, Li, M.Y, Zhang, Y, Zheng, L.T, Ge, J, Huang, Y.C, Liu, Z.Y, Wang, T, Gao, S, Zhang, R, Huang, Y.Y, Guddat, L.W, Gao, Y, Rao, Z.H, Lou, Z.Y.
Deposit date:2021-04-01
Release date:2021-09-22
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY
Cite:Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Cell, 184, 2021
5YHO
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BU of 5yho by Molmil
Crystal structure of acetolactate decarboxylase from Enterobacter cloacae
Descriptor: Alpha-acetolactate decarboxylase, CHLORIDE ION, ZINC ION
Authors:Ji, F.L, Li, M.Y, Feng, Y.B.
Deposit date:2017-09-29
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal structure of acetolactate decarboxylase from Enterobacter cloacae
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数据于2024-10-30公开中

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