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PDB: 203 results

4IVS
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Crystal structure of BACE1 with its inhibitor
Descriptor: Beta-secretase 1, N-{N-[4-(acetylamino)-3,5-dichlorobenzyl]carbamimidoyl}-2-(6-cyano-1H-indol-1-yl)acetamide
Authors:Chen, T.T, Li, L, Chen, W.Y, Xu, Y.C.
Deposit date:2013-01-23
Release date:2013-11-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.636 Å)
Cite:Virtual screening and structure-based discovery of indole acylguanidines as potent beta-secretase (BACE1) inhibitors
Molecules, 18, 2013
2LH8
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BU of 2lh8 by Molmil
Syrian hamster prion protein with thiamine
Descriptor: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, Major prion protein
Authors:Perez-Pineiro, R, Bjorndahl, T.C, Berjanskii, M, Hau, D, Li, L, Huang, A, Lee, R, Gibbs, E, Ladner, C, Wei Dong, Y, Abera, A, Cashman, N.R, Wishart, D.
Deposit date:2011-08-05
Release date:2011-09-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The prion protein binds thiamine.
Febs J., 278, 2011
2L6I
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BU of 2l6i by Molmil
Solution structure of coronaviral stem-loop 2 (SL2)
Descriptor: RNA (5'-R(*GP*AP*UP*CP*UP*CP*UP*UP*GP*UP*AP*GP*AP*UP*CP*A)-3')
Authors:Lee, C, Li, L, Giedroc, D.P.
Deposit date:2010-11-21
Release date:2011-03-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The solution structure of coronaviral stem-loop 2 (SL2) reveals a canonical CUYG tetraloop fold.
Febs Lett., 585, 2011
6LO8
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BU of 6lo8 by Molmil
Cryo-EM structure of the TIM22 complex from yeast
Descriptor: Mitochondrial import inner membrane translocase subunit TIM10, Mitochondrial import inner membrane translocase subunit TIM12, Mitochondrial import inner membrane translocase subunit TIM18, ...
Authors:Zhang, Y, Zhou, X, Wu, X, Li, L.
Deposit date:2020-01-04
Release date:2020-09-30
Last modified:2021-03-17
Method:ELECTRON MICROSCOPY (3.83 Å)
Cite:Structure of the mitochondrial TIM22 complex from yeast.
Cell Res., 31, 2021
6M3B
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BU of 6m3b by Molmil
hAPC-c25k23 Fab complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Vitamin K-dependent protein C heavy chain, Vitamin K-dependent protein C light chain, ...
Authors:Wang, X, Li, L, Zhao, X, Egner, U.
Deposit date:2020-03-03
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Targeted inhibition of activated protein C by a non-active-site inhibitory antibody to treat hemophilia.
Nat Commun, 11, 2020
7BTN
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BU of 7btn by Molmil
Crystal structure of human inorganic pyrophosphatase with metal ions
Descriptor: Inorganic pyrophosphatase, MAGNESIUM ION
Authors:Hu, F, Huang, Z, Li, L.
Deposit date:2020-04-02
Release date:2020-10-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:Structural and biochemical characterization of inorganic pyrophosphatase from Homo sapiens.
Biochem.Biophys.Res.Commun., 533, 2020
7BWQ
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BU of 7bwq by Molmil
Structure of nonstructural protein Nsp9 from SARS-CoV-2
Descriptor: Nsp9, SULFATE ION
Authors:Zhang, C, Chen, Y, Li, L, Su, D.
Deposit date:2020-04-15
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.954 Å)
Cite:Structural basis for the multimerization of nonstructural protein nsp9 from SARS-CoV-2.
Mol Biomed, 1, 2020
7CMO
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BU of 7cmo by Molmil
Crystal structure of human inorganic pyrophosphatase
Descriptor: Inorganic pyrophosphatase
Authors:Hu, F, Huang, Z, Li, L.
Deposit date:2020-07-28
Release date:2020-10-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural and biochemical characterization of inorganic pyrophosphatase from Homo sapiens.
Biochem.Biophys.Res.Commun., 533, 2020
4FQB
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BU of 4fqb by Molmil
crystal structure of toxic effector Tse1 in complex with immune protein Tsi1
Descriptor: immune protein Tsi1, toxic effector Tse1
Authors:Wang, T, Li, L, Zhang, W.
Deposit date:2012-06-25
Release date:2013-06-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:structural basis of Tse1 in complex with Tsi1
To be Published
4FCO
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BU of 4fco by Molmil
Crystal structure of bace1 with its inhibitor
Descriptor: Beta-secretase 1, N-[(2S,3R)-4-{[2-(1-benzylpiperidin-4-yl)ethyl]amino}-3-hydroxy-1-phenylbutan-2-yl]-5-[methyl(methylsulfonyl)amino]-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide, SULFATE ION, ...
Authors:Chen, T.T, Chen, W.Y, Li, L, Xu, Y.C.
Deposit date:2012-05-25
Release date:2013-05-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Flexibility of the Flap in the Active Site of BACE1 as Revealed by Crystal Structures and MD simulations
To be Published, 2012
4F8Y
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BU of 4f8y by Molmil
Complex structure of NADPH:quinone oxidoreductase with menadione in Streptococcus mutans
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MENADIONE, NADPH Quinone Oxidoreductase
Authors:Wang, Z, Li, L, Su, X.-D.
Deposit date:2012-05-18
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Complex structure of NADPH:quinone oxidoreductase with menadione in Streptococcus mutans
TO BE PUBLISHED
5XMK
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BU of 5xmk by Molmil
Cryo-EM structure of the ATP-bound Vps4 mutant-E233Q complex with Vta1 (masked)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Vacuolar protein sorting-associated protein 4, Vacuolar protein sorting-associated protein VTA1
Authors:Sun, S, Li, L, Yang, F, Wang, X, Fan, F, Li, X, Wang, H, Sui, S.
Deposit date:2017-05-15
Release date:2017-08-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Cryo-EM structures of the ATP-bound Vps4(E233Q) hexamer and its complex with Vta1 at near-atomic resolution
Nat Commun, 8, 2017
5XMI
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Cryo-EM Structure of the ATP-bound VPS4 mutant-E233Q hexamer (masked)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Vacuolar protein sorting-associated protein 4
Authors:Sun, S, Li, L, Yang, F, Wang, X, Fan, F, Li, X, Wang, H, Sui, S.
Deposit date:2017-05-15
Release date:2017-08-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of the ATP-bound Vps4(E233Q) hexamer and its complex with Vta1 at near-atomic resolution
Nat Commun, 8, 2017
5Z87
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BU of 5z87 by Molmil
Structural of a novel b-glucosidase EmGH1 at 2.3 angstrom from Erythrobacter marinus
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BENZAMIDINE, ...
Authors:Li, J.X, Hu, X.J, Zhao, Y, Li, L.
Deposit date:2018-01-31
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical analysis of a novel b-glucosidase EmGH1 from Erythrobacter marinus
To Be Published
3RT3
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BU of 3rt3 by Molmil
Complex of influenza virus protein with host anti-viral factor
Descriptor: Non-structural protein 1, SUCCINIC ACID, Ubiquitin-like protein ISG15
Authors:Wang, X.Q, Li, L.
Deposit date:2011-05-03
Release date:2011-07-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal structure of human ISG15 in complex with influenza B virus NS1B
To be Published
3F9G
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BU of 3f9g by Molmil
Crystal Structure of the F140A mutant of SARS-Coronovirus 3C-like Protease at pH 6.5
Descriptor: 3C-like proteinase
Authors:Hu, T, Li, L, Jiang, H, Shen, X.
Deposit date:2008-11-13
Release date:2009-09-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Two adjacent mutations on the dimer interface of SARS coronavirus 3C-like protease cause different conformational changes in crystal structure.
Virology, 388, 2009
8IWD
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BU of 8iwd by Molmil
Aspergillus niger Rha-2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L.J, Li, L, Wang, M.H, Jiang, Z.D, Zhu, Y.B, Jin, T.C, Ni, H.
Deposit date:2023-03-29
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structure and catalytic function of alpha-L-rhamnosidase from Aspergillus niger
To Be Published
8IWF
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BU of 8iwf by Molmil
Aspergillus niger Rha-2 and pNPR
Descriptor: (2S,3R,4R,5R,6S)-2-methyl-6-[4-[oxidanyl(oxidanylidene)-$l^4-azanyl]phenoxy]oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L.J, Li, L, Wang, M.H, Jiang, Z.D, Zhu, Y.B, Jin, T.C, Ni, H.
Deposit date:2023-03-29
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Crystal structure and catalytic function of alpha-L-rhamnosidase from Aspergillus niger
To Be Published
3F9F
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Crystal Structure of the F140A mutant of SARS-Coronovirus 3C-like Protease at pH 6.0
Descriptor: 3C-like proteinase
Authors:Hu, T, Li, L, Jiang, H, Shen, X.
Deposit date:2008-11-13
Release date:2009-09-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Two adjacent mutations on the dimer interface of SARS coronavirus 3C-like protease cause different conformational changes in crystal structure.
Virology, 388, 2009
3F9H
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BU of 3f9h by Molmil
Crystal Structure of the F140A mutant of SARS-Coronovirus 3C-like Protease at pH 7.6
Descriptor: 3C-like proteinase
Authors:Hu, T, Li, L, Jiang, H, Shen, X.
Deposit date:2008-11-13
Release date:2009-09-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Two adjacent mutations on the dimer interface of SARS coronavirus 3C-like protease cause different conformational changes in crystal structure.
Virology, 388, 2009
3F9E
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BU of 3f9e by Molmil
Crystal Structure of the S139A mutant of SARS-Coronovirus 3C-like Protease
Descriptor: 3C-like proteinase
Authors:Hu, T, Li, L, Jiang, H, Shen, X.
Deposit date:2008-11-13
Release date:2009-09-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Two adjacent mutations on the dimer interface of SARS coronavirus 3C-like protease cause different conformational changes in crystal structure.
Virology, 388, 2009
6JV0
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BU of 6jv0 by Molmil
Crystal Structure of N-terminal domain of ArgZ, bound to Product, an arginine dihydrolase from the Ornithine-Ammonia Cycle in Cyanobacteria
Descriptor: 1,2-ETHANEDIOL, L-ornithine, Sll1336 protein
Authors:Zhuang, N, Li, L, Wu, X, Zhang, Y.
Deposit date:2019-04-15
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystal structures and biochemical analyses of the bacterial arginine dihydrolase ArgZ suggests a "bond rotation" catalytic mechanism.
J.Biol.Chem., 295, 2020
6JV1
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BU of 6jv1 by Molmil
Crystal Structure of N-terminal domain of ArgZ, C264S mutant, bound to Substrate, an arginine dihydrolase from the Ornithine-Ammonia Cycle in Cyanobacteria
Descriptor: ARGININE, Sll1336 protein
Authors:Zhuang, N, Li, L, Wu, X, Zhang, Y.
Deposit date:2019-04-15
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structures and biochemical analyses of the bacterial arginine dihydrolase ArgZ suggests a "bond rotation" catalytic mechanism.
J.Biol.Chem., 295, 2020
6JUY
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BU of 6juy by Molmil
Crystal Structure of ArgZ, apo structure, an Arginine Dihydrolase from the Ornithine-Ammonia Cycle in Cyanobacteria
Descriptor: Sll1336 protein
Authors:Zhuang, N, Li, L, Wu, X, Zhang, Y.
Deposit date:2019-04-15
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Crystal structures and biochemical analyses of the bacterial arginine dihydrolase ArgZ suggests a "bond rotation" catalytic mechanism.
J.Biol.Chem., 295, 2020
3G7F
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Crystal structure of Blastochloris viridis heterodimer mutant reaction center
Descriptor: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
Authors:Ponomarenko, N.S, Li, L, Tereshko, V, Ismagilov, R.F, Norris Jr, J.R.
Deposit date:2009-02-09
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and spectropotentiometric analysis of Blastochloris viridis heterodimer mutant reaction center
Biochim.Biophys.Acta, 1788, 2009

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