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PDB: 497 results

1J8C
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BU of 1j8c by Molmil
Solution Structure of the Ubiquitin-like Domain of hPLIC-2
Descriptor: ubiquitin-like protein hPLIC-2
Authors:Walters, K.J, Kleijnen, M.F, Goh, A.M, Wagner, G, Howley, P.M.
Deposit date:2001-05-21
Release date:2002-03-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a.
Biochemistry, 41, 2002
8PPL
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BU of 8ppl by Molmil
MERS-CoV Nsp1 bound to the human 43S pre-initiation complex
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Schubert, K, Karousis, E.D, Ban, I, Lapointe, C.P, Leibundgut, M, Baeumlin, E, Kummerant, E, Scaiola, A, Schoenhut, T, Ziegelmueller, J, Puglisi, J.D, Muehlemann, O, Ban, N.
Deposit date:2023-07-07
Release date:2023-10-18
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Universal features of Nsp1-mediated translational shutdown by coronaviruses.
Mol.Cell, 83, 2023
8PPK
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BU of 8ppk by Molmil
Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunit
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Schubert, K, Karousis, E.D, Ban, I, Lapointe, C.P, Leibundgut, M, Baeumlin, E, Kummerant, E, Scaiola, A, Schoenhut, T, Ziegelmueller, J, Puglisi, J.D, Muehlemann, O, Ban, N.
Deposit date:2023-07-07
Release date:2023-10-18
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Universal features of Nsp1-mediated translational shutdown by coronaviruses.
Mol.Cell, 83, 2023
8A3H
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BU of 8a3h by Molmil
Cellobiose-derived imidazole complex of the endoglucanase cel5A from Bacillus agaradhaerens at 0.97 A resolution
Descriptor: (5R,6R,7R,8S)-7,8-dihydroxy-5-(hydroxymethyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridin-6-yl beta-D-glucopyranoside, ACETATE ION, GLYCEROL, ...
Authors:Varrot, A, Schulein, M, Pipelier, M, Vasella, A, Davies, G.J.
Deposit date:1999-01-20
Release date:2000-01-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Lateral Protonation of a Glycosidase Inhibitor. Structure of the Bacillus agaradhaerens Cel5A in Complex with a Cellobiose-Derived Imidazole at 0.97 A Resolution
J.Am.Chem.Soc., 121, 1999
6A3H
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BU of 6a3h by Molmil
2-DEOXY-2-FLURO-B-D-CELLOTRIOSYL/ENZYME INTERMEDIATE COMPLEX OF THE ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHEARANS AT 1.6 ANGSTROM RESOLUTION
Descriptor: ENDOGLUCANASE, GLYCEROL, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-glucopyranose
Authors:Davies, G.J, Varrot, A, Dauter, M, Brzozowski, A.M, Schulein, M, Mackenzie, L, Withers, S.G.
Deposit date:1998-07-22
Release date:1999-07-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Snapshots along an enzymatic reaction coordinate: analysis of a retaining beta-glycoside hydrolase.
Biochemistry, 37, 1998
4Q9D
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BU of 4q9d by Molmil
X-ray structure of a putative thiamin diphosphate-dependent enzyme isolated from Mycobacterium smegmatis
Descriptor: Benzoylformate decarboxylase, FORMIC ACID, MAGNESIUM ION
Authors:Andrews, F.H, Horton, J.D, Yoon, H.J, Malik, A.M.K, Logsdon, M.G, Shin, D.H, Kneen, M.M, Suh, S.W, McLeish, M.J.
Deposit date:2014-04-30
Release date:2015-04-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The kinetic characterization and X-ray structure of a putative benzoylformate decarboxylase from M. smegmatis highlights the difficulties in the functional annotation of ThDP-dependent enzymes.
Biochim.Biophys.Acta, 1854, 2015
8OIP
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BU of 8oip by Molmil
28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 12S rRNA, 28S ribosomal protein S15, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-05-24
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
3MG1
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BU of 3mg1 by Molmil
Crystal structure of the orange carotenoid protein from cyanobacteria Synechocystis sp. PCC 6803
Descriptor: GLYCEROL, Orange carotenoid protein, beta,beta-caroten-4-one
Authors:Wilson, A, Kinney, J, Zwart, P.H, Punginelli, C, D'Haen, S, Perreau, F, Klein, M.G, Kirilovsky, D, Kerfeld, C.A.
Deposit date:2010-04-05
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria.
J.Biol.Chem., 285, 2010
8OIR
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BU of 8oir by Molmil
55S human mitochondrial ribosome with mtRF1 and P-site tRNA
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIS
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BU of 8ois by Molmil
28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 12S rRNA, 28S ribosomal protein S10, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIN
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BU of 8oin by Molmil
55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S15, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIT
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BU of 8oit by Molmil
39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIQ
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BU of 8oiq by Molmil
39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
Descriptor: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ...
Authors:Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
Deposit date:2023-03-23
Release date:2023-06-14
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
3MG2
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BU of 3mg2 by Molmil
Crystal structure of the orange carotenoid protein Y44S mutant from cyanobacteria synechocystis sp. PCC 6803
Descriptor: Orange carotenoid protein, beta,beta-caroten-4-one
Authors:Wilson, A, Kinney, J, Zwart, P.H, Punginelli, C, D'Haen, S, Perreau, F, Klein, M.G, Kirilovsky, D, Kerfeld, C.A.
Deposit date:2010-04-05
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.653 Å)
Cite:Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria.
J.Biol.Chem., 285, 2010
5D6R
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BU of 5d6r by Molmil
Acetolactate Synthase from Klebsiella pneumoniae in Complex with Mechanism-Based Inhibitor
Descriptor: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-[(Z)-2-fluoro-1-hydroxy-2-phosphonoethenyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, Acetolactate synthase, catabolic, ...
Authors:Latta, A.J, Andrews, F.H, McLeish, M.J.
Deposit date:2015-08-12
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.276 Å)
Cite:Acetolactate Synthase from Klebsiella pneumoniae in Complex with Mechanism-Based Inhibitor
To Be Published
5GAF
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BU of 5gaf by Molmil
RNC in complex with SRP
Descriptor: 1A9L SS, 23S ribosomal RNA, 50S ribosomal protein L10, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-25
Release date:2016-02-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon
Nat Commun, 7, 2016
4ENG
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BU of 4eng by Molmil
STRUCTURE OF ENDOGLUCANASE V CELLOHEXAOSE COMPLEX
Descriptor: ENDOGLUCANASE V CELLOHEXAOSE COMPLEX, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Davies, G.J, Schulein, M.
Deposit date:1996-10-17
Release date:1997-06-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure determination and refinement of the Humicola insolens endoglucanase V at 1.5 A resolution.
Acta Crystallogr.,Sect.D, 52, 1996
5GAE
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BU of 5gae by Molmil
RNC in complex with a translocating SecYEG
Descriptor: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-25
Release date:2016-01-27
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Nat Commun, 7, 2016
5CM1
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BU of 5cm1 by Molmil
X-ray structure of perdeuterated TTR mutant - T119M at 1.22A
Descriptor: Transthyretin
Authors:Yee, A.W, Moulin, M, Mossou, E, Haertlein, M, Mitchell, E.P, Cooper, J.B, Forsyth, V.T.
Deposit date:2015-07-16
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:X-ray structure of perdeuterated TTR mutant - T119M at 1.22A
To Be Published
2LRD
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BU of 2lrd by Molmil
The solution structure of the monomeric Acanthaporin
Descriptor: Acanthaporin
Authors:Michalek, M, Soennichsen, F.D, Wechselberger, R, Dingley, A.J, Wienk, H, Simanski, M, Herbst, R, Lorenzen, I, Marciano-Cabral, F, Gelhaus, C, Groetzinger, J, Leippe, M.
Deposit date:2012-03-28
Release date:2012-05-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and function of a unique pore-forming protein from a pathogenic acanthamoeba.
Nat.Chem.Biol., 9, 2013
4OVW
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BU of 4ovw by Molmil
ENDOGLUCANASE I COMPLEXED WITH EPOXYBUTYL CELLOBIOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(beta-D-glucopyranosyloxy)-2,2-dihydroxybutyl propanoate, ENDOGLUCANASE I
Authors:Davies, G.J, Schulein, M.
Deposit date:1997-10-06
Release date:1998-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the endoglucanase I from Fusarium oxysporum: native, cellobiose, and 3,4-epoxybutyl beta-D-cellobioside-inhibited forms, at 2.3 A resolution.
Biochemistry, 36, 1997
5CLX
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BU of 5clx by Molmil
X-ray structure of perdeuterated TTR mutant - S52P at 1.28A resolution
Descriptor: GLYCEROL, Transthyretin
Authors:Yee, A.W, Moulin, M, Mossou, E, Haertlein, M, Mitchell, E.P, Cooper, J.B, Forsyth, V.T.
Deposit date:2015-07-16
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:X-ray structure of perdeuterated TTR mutant - S52P at 1.28A resolution
To Be Published
5CLY
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BU of 5cly by Molmil
X-ray structure of TTR mutant - S52P at 1.23A resolution
Descriptor: GLYCEROL, Transthyretin
Authors:Yee, A.W, Moulin, M, Mossou, E, Haertlein, M, Mitchell, E.P, Cooper, J.B, Forsyth, V.T.
Deposit date:2015-07-16
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:X-ray structure of TTR mutant - S52P at 1.23A resolution
To Be Published
5CLZ
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BU of 5clz by Molmil
X-ray structure of TTR mutant - T119M at 1.22A resolution
Descriptor: Transthyretin
Authors:Yee, A.W, Moulin, M, Mossou, E, Cooper, J.B, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
Deposit date:2015-07-16
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:X-ray structure of TTR mutant - T119M at 1.22A resolution
To Be Published
5CN3
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BU of 5cn3 by Molmil
X-ray structure of wild-type TTR at 1.30A resolution
Descriptor: Transthyretin
Authors:Yee, A.W, Moulin, M, Mossou, E, Haertlein, M, Mitchell, E.P, Cooper, J.B, Forsyth, V.T.
Deposit date:2015-07-17
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Impact of Deuteration on the Assembly Kinetics of Transthyretin Monitored by Native Mass Spectrometry and Implications for Amyloidoses.
Angew.Chem.Int.Ed.Engl., 55, 2016

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