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PDB: 205 results

3O4A
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BU of 3o4a by Molmil
Crystal structure of Symfoil-2: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
Authors:Lee, J, Blaber, M.
Deposit date:2010-07-26
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O4D
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BU of 3o4d by Molmil
Crystal structure of Symfoil-4P: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, SULFATE ION, ...
Authors:Lee, J, Blaber, M.
Deposit date:2010-07-26
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O49
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BU of 3o49 by Molmil
Crystal structure of Symfoil-1: de novo designed beta-trefoil architecture with symmetric primary structure
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, de novo designed beta-trefoil architecture with symmetric primary structure
Authors:Lee, J, Blaber, M.
Deposit date:2010-07-26
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O3Q
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BU of 3o3q by Molmil
Crystal structure of "L44F/M67I/L73V/A103G/deletion 104-106/F108Y/V109L/L111I/C117V/R119G/deletion 120-122" mutant form of Human acidic fibroblast growth factor
Descriptor: GLYCEROL, Heparin-binding growth factor 1
Authors:Lee, J, Blaber, M.
Deposit date:2010-07-25
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A polypeptide "building block"top-down symmetric deconstruction".
J.Mol.Biol., 407, 2011
7KHP
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BU of 7khp by Molmil
Acyl-enzyme intermediate structure of SARS-CoV-2 Mpro in complex with its C-terminal autoprocessing sequence.
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-10-21
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
7JOY
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BU of 7joy by Molmil
Product structure of SARS-CoV-2 Mpro C145A mutant in complex with its C-terminal autoprocessing sequence.
Descriptor: 3C-like proteinase
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-08-07
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
7JP1
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BU of 7jp1 by Molmil
Structure of wild-type substrate free SARS-CoV-2 Mpro.
Descriptor: 3C-like proteinase
Authors:Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
Deposit date:2020-08-07
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
5UMV
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BU of 5umv by Molmil
Crystal structure of the BRCT domain of S. cerevisiae Rev1
Descriptor: DNA repair protein REV1
Authors:Lee, J, Xu, C, Thompson, J.R, Botuyan, M.V, Mer, G.
Deposit date:2017-01-29
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the BRCT domain of S. cerevisiae Rev1
To Be Published
5T42
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BU of 5t42 by Molmil
Structure of the Ebola virus envelope protein MPER/TM domain and its interaction with the fusion loop explains their fusion activity
Descriptor: Envelope glycoprotein
Authors:Lee, J, Nyenhuis, D.A, Nelson, E.A, Cafiso, D.S, White, J.M, Tamm, L.K.
Deposit date:2016-08-28
Release date:2017-08-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the Ebola virus envelope protein MPER/TM domain and its interaction with the fusion loop explains their fusion activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4MVD
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BU of 4mvd by Molmil
Crystal Structure of a Mammalian Cytidylyltransferase
Descriptor: Choline-phosphate cytidylyltransferase A, [2-CYTIDYLATE-O'-PHOSPHONYLOXYL]-ETHYL-TRIMETHYL-AMMONIUM
Authors:Lee, J, Cornell, R.B.
Deposit date:2013-09-23
Release date:2013-12-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (8 Å)
Cite:Structural Basis for Autoinhibition of CTP:Phosphocholine Cytidylyltransferase (CCT), the Regulatory Enzyme in Phosphatidylcholine Synthesis, by Its Membrane-binding Amphipathic Helix.
J.Biol.Chem., 289, 2014
3OL0
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BU of 3ol0 by Molmil
Crystal structure of Monofoil-4P homo-trimer: de novo designed monomer trefoil-fold sub-domain which forms homo-trimer assembly
Descriptor: SULFATE ION, de novo designed monomer trefoil-fold sub-domain which forms homo-trimer assembly
Authors:Lee, J, Blaber, M.
Deposit date:2010-08-25
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.483 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PD7
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BU of 3pd7 by Molmil
Crystal Structure of the Sixth BRCT Domain of Human TopBP1
Descriptor: DNA topoisomerase 2-binding protein 1
Authors:Lee, J, Xu, C, Cui, G, Thompson, J.R, Mer, G.
Deposit date:2010-10-22
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal Structure of the Sixth BRCT Domain of Human TopBP1
To be Published
3OGF
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BU of 3ogf by Molmil
Crystal structure of Difoil-4P homo-trimer: de novo designed dimeric trefoil-fold sub-domain which forms homo-trimer assembly
Descriptor: SULFATE ION, de novo designed dimeric trefoil-fold sub-domain which forms homo-trimer assembly
Authors:Lee, J, Blaber, M.
Deposit date:2010-08-16
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.864 Å)
Cite:Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
7Y7O
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BU of 7y7o by Molmil
Crystal structure of metallo-endoribonuclease YbeY from Staphylococcus aureus
Descriptor: CITRIC ACID, Endoribonuclease YbeY, ZINC ION
Authors:Lee, J, Ha, N.-C.
Deposit date:2022-06-22
Release date:2023-03-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Metallo-Endoribonuclease YbeY from Staphylococcus aureus.
J Microbiol Biotechnol., 33, 2023
7WBM
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BU of 7wbm by Molmil
Crystal structure of Legionella pneumophila effector protein Lpg0081
Descriptor: Lpg0081, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Lee, J, Kim, H, Oh, B.H.
Deposit date:2021-12-17
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WBK
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BU of 7wbk by Molmil
Crystal structure of Legionella pneumophila effector protein Lpg0081
Descriptor: Lpg0081, SULFATE ION
Authors:Lee, J, Kim, H, Oh, B.H.
Deposit date:2021-12-16
Release date:2022-06-15
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
2LXJ
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BU of 2lxj by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for cold shock protein, LmCsp with dT7
Descriptor: Cold shock-like protein CspLA
Authors:Lee, J, Jeong, K, Kim, Y.
Deposit date:2012-08-27
Release date:2013-08-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Dynamic Features of Cold-Shock Proteins of Listeriamonocytogenes, a Psychrophilic Bacterium
Biochemistry, 52, 2013
2LXK
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BU of 2lxk by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for cold shock protein, LmCsp
Descriptor: Cold shock-like protein CspLA
Authors:Lee, J, Jeong, K, Kim, Y.
Deposit date:2012-08-27
Release date:2013-08-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Dynamic Features of Cold-Shock Proteins of Listeriamonocytogenes, a Psychrophilic Bacterium
Biochemistry, 52, 2013
8HU2
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BU of 8hu2 by Molmil
Rattus Syntenin-1 PDZ domain with inhibitor
Descriptor: (2~{S})-2-(9~{H}-fluoren-9-ylmethoxycarbonylamino)-3-(4-oxidanylidene-5~{H}-pyrimidin-2-yl)propanoic acid, Syntenin-1
Authors:Heo, Y, Lee, J, Yun, J.H, Lee, W.
Deposit date:2022-12-22
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of STNPDZ with inhibitor at 1.60 Angstroms resolution.
To Be Published
1LX8
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BU of 1lx8 by Molmil
Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein
Descriptor: Excisionase
Authors:Sam, M.D, Papagiannis, C, Connolly, K.M, Corselli, L, Iwahara, J, Lee, J, Phillips, M, Wojciak, J.M, Johnson, R.C, Clubb, R.T.
Deposit date:2002-06-04
Release date:2003-06-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein
J.Mol.Biol., 324, 2002
2PNL
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BU of 2pnl by Molmil
Crystal structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P1
Descriptor: GUANIDINE, Protease VP4
Authors:Paetzel, M, Lee, J, Feldman, A.R, Delmas, B.
Deposit date:2007-04-24
Release date:2007-06-05
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction.
J.Biol.Chem., 282, 2007
2PNM
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BU of 2pnm by Molmil
Crystal Structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P6122
Descriptor: Protease VP4
Authors:Paetzel, M, Lee, J, Feldman, A.R, Delmas, B.
Deposit date:2007-04-24
Release date:2007-06-05
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction.
J.Biol.Chem., 282, 2007
4N1F
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BU of 4n1f by Molmil
Crystal Structure of F88Y obelin mutant from Obelia longissima at 2.09 Angstrom resolution
Descriptor: C2-HYDROPEROXY-COELENTERAZINE, Obelin
Authors:Natashin, P.V, Markova, S.V, Lee, J, Vysotski, E.S, Liu, Z.J.
Deposit date:2013-10-04
Release date:2014-02-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.087 Å)
Cite:Crystal structures of the F88Y obelin mutant before and after bioluminescence provide molecular insight into spectral tuning among hydromedusan photoproteins
Febs J., 281, 2014
3BA5
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BU of 3ba5 by Molmil
Crystal structure of D28A mutant of Human acidic fibroblast growth factor
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Blaber, M, Lee, J.
Deposit date:2007-11-07
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif.
J.Mol.Biol., 377, 2008
3BAD
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BU of 3bad by Molmil
Crystal structure of D70A/H93G mutant of Human acidic fibroblast growth factor
Descriptor: Heparin-binding growth factor 1, SULFATE ION
Authors:Blaber, M, Lee, J.
Deposit date:2007-11-07
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif.
J.Mol.Biol., 377, 2008

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数据于2024-06-19公开中

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