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PDB: 835 件

2QQR
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JMJD2A hybrid tudor domains
分子名称: JmjC domain-containing histone demethylation protein 3A, SULFATE ION
著者Lee, J, Botuyan, M.V, Mer, G.
登録日2007-07-26
公開日2007-12-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor.
Nat.Struct.Mol.Biol., 15, 2008
6IYM
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Fumarylacetoacetate hydrolase (EaFAH) from psychrophilic Exiguobacterium antarcticum
分子名称: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase, MAGNESIUM ION
著者Lee, J.H, Lee, C.W.
登録日2018-12-17
公開日2019-04-03
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional analysis of a dimeric fumarylacetoacetate hydrolase (EaFAH) from psychrophilic Exiguobacterium antarcticum.
Biochem. Biophys. Res. Commun., 509, 2019
2QQS
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JMJD2A tandem tudor domains in complex with a trimethylated histone H4-K20 peptide
分子名称: JmjC domain-containing histone demethylation protein 3A, METHYLATED HISTONE H4 PEPTIDE
著者Lee, J, Botuyan, M.V, Mer, G.
登録日2007-07-26
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor.
Nat.Struct.Mol.Biol., 15, 2008
8SGX
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Leishmania tarentolae propionyl-CoA carboxylase (alpha-4-beta-6)
分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ...
著者Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
登録日2023-04-13
公開日2023-05-17
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (10.3 Å)
主引用文献CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics.
J Struct Biol X, 7, 2023
8SGZ
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Leishmania tarentolae propionyl-CoA carboxylase (alpha-6-beta-6)
分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ...
著者Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
登録日2023-04-13
公開日2023-05-17
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics.
J Struct Biol X, 7, 2023
8SGY
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Leishmania tarentolae propionyl-CoA carboxylase (alpha-5-beta-6)
分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ...
著者Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
登録日2023-04-13
公開日2023-05-17
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (8.62 Å)
主引用文献CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics.
J Struct Biol X, 7, 2023
2V2W
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T CELL CROSS-REACTIVITY AND CONFORMATIONAL CHANGES DURING TCR ENGAGEMENT
分子名称: BETA-2 MICROGLOBULIN, HIV P17, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
著者Lee, J.K, Stewart-Jones, G, Dong, T, Harlos, K, Di Gleria, K, Dorrell, L, Douek, D.C, Van Der Merwe, P.A, Jones, E.Y, Mcmichael, A.J.
登録日2007-06-07
公開日2007-11-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献T Cell Cross-Reactivity and Conformational Changes During Tcr Engagement.
J.Exp.Med., 200, 2004
2V2X
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T cell cross-reactivity and conformational changes during TCR engagement.
分子名称: BETA-2 MICROGLOBULIN, HIV P17, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
著者Lee, J.K, Stewart-Jones, G, Dong, T, harlos, K, Di Gleria, K, Dorrell, L, Douek, D.C, van der Merwe, P.A, Jones, E.Y, McMichael, A.J.
登録日2007-06-07
公開日2007-11-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献T Cell Cross-Reactivity and Conformational Changes During Tcr Engagement.
J.Exp.Med., 200, 2004
8G36
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Crystal structure of F182L-CYP199A4 in complex with terephthalic acid
分子名称: CHLORIDE ION, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Lee, J.H.Z, Bruning, J.B, Bell, S.G.
登録日2023-02-06
公開日2023-05-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Engineering C-C Bond Cleavage Activity into a P450 Monooxygenase Enzyme.
J.Am.Chem.Soc., 145, 2023
2IE8
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Crystal structure of Thermus caldophilus phosphoglycerate kinase in the open conformation
分子名称: phosphoglycerate kinase
著者Lee, J.H, Im, Y.J, Eom, S.H.
登録日2006-09-18
公開日2006-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Thermus caldophilus phosphoglycerate kinase in the open conformation
Biochem.Biophys.Res.Commun., 350, 2006
1NC1
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BU of 1nc1 by Molmil
Crystal structure of E. coli MTA/AdoHcy nucleosidase complexed with 5'-methylthiotubercidin (MTH)
分子名称: 2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-METHYLSULFANYLMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, MTA/SAH nucleosidase
著者Lee, J.E, Cornell, K.A, Riscoe, M.K, Howell, P.L.
登録日2002-12-04
公開日2003-11-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Escherichia coli 5'-methylthioadenosine/ S-adenosylhomocysteine nucleosidase inhibitor complexes provide insight into the conformational changes required for substrate binding and catalysis.
J.Biol.Chem., 278, 2003
2VLG
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BU of 2vlg by Molmil
KinA PAS-A domain, homodimer
分子名称: ACETATE ION, CHLORIDE ION, SPORULATION KINASE A
著者Lee, J, Tomchick, D.R, Brautigam, C.A, Machius, M, Kort, R, Hellingwerf, K.J, Gardner, K.H.
登録日2008-01-14
公開日2008-03-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Changes at the Kina Pas-A Dimerization Interface Influence Histidine Kinase Function.
Biochemistry, 47, 2008
6IF1
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BU of 6if1 by Molmil
Crystal structure of Ube2K and K48-linked di-ubiquitin complex
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
著者Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Lim, J.J, Eom, S.H.
登録日2018-09-18
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.466 Å)
主引用文献Crystal structure of the Ube2K/E2-25K and K48-linked di-ubiquitin complex provides structural insight into the mechanism of K48-specific ubiquitin chain synthesis.
Biochem. Biophys. Res. Commun., 506, 2018
2QZX
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BU of 2qzx by Molmil
Secreted aspartic proteinase (Sap) 5 from Candida albicans
分子名称: Candidapepsin-5, Pepstatin
著者Lee, J.H, Ruge, E, Borelli, C, Maskos, K, Huber, R.
登録日2007-08-17
公開日2008-07-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献X-ray structures of Sap1 and Sap5: Structural comparison of the secreted aspartic proteinases from Candida albicans.
Proteins, 72, 2008
8VQB
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BU of 8vqb by Molmil
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2
著者Lee, J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-01-18
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A broadly generalizable stabilization strategy for sarbecovirus fusion machinery vaccines.
Nat Commun, 15, 2024
8VQ9
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Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2
著者Lee, J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-01-18
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献A broadly generalizable stabilization strategy for sarbecovirus fusion machinery vaccines.
Nat Commun, 15, 2024
8VQA
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Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2
著者Lee, J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-01-18
公開日2024-07-24
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A broadly generalizable stabilization strategy for sarbecovirus fusion machinery vaccines.
Nat Commun, 15, 2024
8GLZ
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Crystal structure of T252E-CYP199A4 in complex with 4-hydroxybenzoic acid. Crystal was initially co-crystallised with 4-methoxybenzoic acid and soaked with 4 mM hydrogen peroxide
分子名称: CHLORIDE ION, Cytochrome P450, P-HYDROXYBENZOIC ACID, ...
著者Lee, J.H.Z, Bruning, J.B, Bell, S.G.
登録日2023-03-23
公開日2023-12-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献An In Crystallo Reaction with an Engineered Cytochrome P450 Peroxygenase.
Chemistry, 30, 2024
8GM2
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Crystal structure of T252E-CYP199A4 in complex with 4-methoxybenzoic acid soaked with 2 mM hydrogen peroxide
分子名称: 4-METHOXYBENZOIC ACID, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Lee, J.H.Z, Bruning, J.B, Bell, S.G.
登録日2023-03-24
公開日2023-12-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献An In Crystallo Reaction with an Engineered Cytochrome P450 Peroxygenase.
Chemistry, 30, 2024
8WP9
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BU of 8wp9 by Molmil
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
分子名称: Small heat shock protein HSP16.5
著者Lee, J, Ryu, B, Kim, T, Kim, K.K.
登録日2023-10-09
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献Cryo-EM structure of a 16.5-kDa small heat-shock protein from Methanocaldococcus jannaschii.
Int.J.Biol.Macromol., 258, 2024
8GLY
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BU of 8gly by Molmil
Crystal structure of T252E-CYP199A4 in complex with 4-hydroxybenzoic acid
分子名称: CHLORIDE ION, Cytochrome P450, P-HYDROXYBENZOIC ACID, ...
著者Lee, J.H.Z, Bruning, J.B, Bell, S.G.
登録日2023-03-23
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献An In Crystallo Reaction with an Engineered Cytochrome P450 Peroxygenase.
Chemistry, 30, 2024
8T46
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Transporter associated with antigen processing (TAP) in the apo state
分子名称: Antigen peptide transporter 1, Antigen peptide transporter 2
著者Lee, J, Oldham, M.L, Chen, J.
登録日2023-06-08
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Principles of peptide selection by the transporter associated with antigen processing.
Proc.Natl.Acad.Sci.USA, 121, 2024
8T4H
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Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL
分子名称: Antigen peptide transporter 1, Antigen peptide transporter 2, Synthetic 8-mer peptide
著者Lee, J, Chen, J.
登録日2023-06-09
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL
To Be Published
8T4F
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Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL
分子名称: Antigen peptide transporter 1, Antigen peptide transporter 2, Histone H3.3C peptide
著者Lee, J, Oldham, M.L, Chen, J.
登録日2023-06-09
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL
To Be Published
8T4G
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Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL
分子名称: Antigen peptide transporter 1, Antigen peptide transporter 2, HLA-C4 specific peptide
著者Lee, J, Oldham, M.L, Chen, J.
登録日2023-06-09
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL
To Be Published

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件を2024-10-30に公開中

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