Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 139 件
6O0Q
DownloadVisualize
BU of 6o0q by Molmil
Crystal structure of the TIR domain from human SARM1 in complex with ribose
分子名称: CHLORIDE ION, Sterile alpha and TIR motif-containing protein 1, beta-D-ribofuranose
著者Horsefield, S, Burdett, H, Zhang, X, Manik, M.K, Shi, Y, Chen, J, Tiancong, Q, Gilley, J, Lai, J, Gu, W, Rank, M, Deerain, N, Casey, L, Ericsson, D.J, Foley, G, Hughes, R.O, Bosanac, T, von Itzstein, M, Rathjen, J.P, Nanson, J.D, Boden, M, Dry, I.B, Williams, S.J, Staskawicz, B.J, Coleman, M.P, Ve, T, Dodds, P.N, Kobe, B.
登録日2019-02-17
公開日2019-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献NAD+cleavage activity by animal and plant TIR domains in cell death pathways.
Science, 365, 2019
4G2K
DownloadVisualize
BU of 4g2k by Molmil
Crystal structure of the Marburg Virus GP2 ectodomain in its post-fusion conformation
分子名称: CHLORIDE ION, GLYCEROL, General control protein GCN4, ...
著者Malashkevich, V.N, Koellhoffer, J.F, Harrison, J.S, Toro, R, Bhosle, R.C, Chandran, K, Lai, J.R, Almo, S.C.
登録日2012-07-12
公開日2012-09-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Marburg Virus GP2 Core Domain in Its Postfusion Conformation.
Biochemistry, 51, 2012
5XP6
DownloadVisualize
BU of 5xp6 by Molmil
native structure of NDM-1 crystallized at pH5.5
分子名称: 1,2-ETHANEDIOL, HYDROXIDE ION, Metallo-beta-lactamase type 2, ...
著者Zhang, H, Ma, G, Lai, J, Sun, H.
登録日2017-06-01
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Bismuth antimicrobial drugs serve as broad-spectrum metallo-beta-lactamase inhibitors
Nat Commun, 9, 2018
6CVA
DownloadVisualize
BU of 6cva by Molmil
Crystal structure of the N. meningitides methionine-binding protein in its substrate-free conformation
分子名称: Lipoprotein
著者Nguyen, P.T, Lai, J.Y, Kaiser, J.T, Rees, D.C.
登録日2018-03-27
公開日2019-04-03
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (1.559 Å)
主引用文献Structures of the Neisseria meningitides methionine-binding protein MetQ in substrate-free form and bound to l- and d-methionine isomers.
Protein Sci., 28, 2019
4P67
DownloadVisualize
BU of 4p67 by Molmil
CRYSTAL STRUCTURE OF Central Coiled-Coil from Influenza Hemagglutinin HA2 without Heptad Repeat Stutter, spacegroup P3(1)
分子名称: Hemagglutinin
著者Malashkevich, V.N, Higgins, C.D, Lai, J.R, Almo, S.C.
登録日2014-03-22
公開日2014-05-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献CRYSTAL STRUCTURE OF Central Coiled-Coil from InfluenzaHemagglutinin HA2 without Heptad Repeat Stutter, spacegroup P3(1)
to be published
4S1X
DownloadVisualize
BU of 4s1x by Molmil
Crystal structure of HA2-Del-L2seM, Central Coiled-Coil from Influenza Hemagglutinin HA2 without Heptad Repeat Stutter
分子名称: GLYCEROL, Truncated hemagglutinin
著者Malashkevich, V.N, Higgins, C.D, Lai, J.R, Almo, S.C.
登録日2015-01-15
公開日2015-04-01
最終更新日2015-06-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A switch from parallel to antiparallel strand orientation in a coiled-coil X-ray structure via two core hydrophobic mutations.
Biopolymers, 104, 2015
4OXM
DownloadVisualize
BU of 4oxm by Molmil
CRYSTAL STRUCTURE OF Central Coiled-Coil from Influenza Hemagglutinin HA2 without Heptad Repeat Stutter
分子名称: HA2-Del
著者Malashkevich, V.N, Higgins, C.D, Lai, J.R, Almo, S.C.
登録日2014-02-05
公開日2014-04-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献CRYSTAL STRUCTURE OF Central Coiled-Coil from InfluenzaHemagglutinin HA2 without Heptad Repeat Stutter
to be published
5NM3
DownloadVisualize
BU of 5nm3 by Molmil
Deinococcus radiodurans BphP PAS-GAF-PHY Y263F mutant, pre-illuminated
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
著者Takala, H, Westehoff, S, Ihalainen, J.A.
登録日2017-04-05
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献On the (un)coupling of the chromophore, tongue interactions, and overall conformation in a bacterial phytochrome.
J. Biol. Chem., 293, 2018
4U38
DownloadVisualize
BU of 4u38 by Molmil
RNA duplex containing UU mispair
分子名称: RNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')
著者Sheng, J, Larsen, A, Heuberger, B, Blain, J.C, Szostak, J.W.
登録日2014-07-18
公開日2014-08-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure Studies of RNA Duplexes Containing s(2)U:A and s(2)U:U Base Pairs.
J.Am.Chem.Soc., 136, 2014
4U34
DownloadVisualize
BU of 4u34 by Molmil
Crystal Structures of RNA Duplexes Containing 2-thio-Uridine
分子名称: RNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3')
著者Sheng, J, Larsen, A, Heuberger, B, Blain, J.C, Szostak, J.W.
登録日2014-07-18
公開日2014-08-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal Structure Studies of RNA Duplexes Containing s(2)U:A and s(2)U:U Base Pairs.
J.Am.Chem.Soc., 136, 2014
4U35
DownloadVisualize
BU of 4u35 by Molmil
Crystal Structures of RNA Duplexes Containing 2-thio-Uridine
分子名称: RNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3')
著者Sheng, J, Larsen, A, Heuberger, B, Blain, J.C, Szostak, J.W.
登録日2014-07-18
公開日2014-08-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure Studies of RNA Duplexes Containing s(2)U:A and s(2)U:U Base Pairs.
J.Am.Chem.Soc., 136, 2014
4U37
DownloadVisualize
BU of 4u37 by Molmil
Native 7mer-RNA duplex
分子名称: RNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')
著者Sheng, J, Larsen, A, Heuberger, B, Blain, J.C, Szostak, J.W.
登録日2014-07-18
公開日2014-08-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure Studies of RNA Duplexes Containing s(2)U:A and s(2)U:U Base Pairs.
J.Am.Chem.Soc., 136, 2014
8SMS
DownloadVisualize
BU of 8sms by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase, FabB, and cerulenin crosslinker-crypto Acyl Carrier Protein, AcpP
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 1, Acyl carrier protein, N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-{2-[(2R)-2-hydroxy-4-oxododecanamido]ethyl}-beta-alaninamide
著者Jiang, Z, Chen, A, Chen, J, Sekhon, A, Louie, G.V, Noel, J.P, La Clair, J.J, Burkart, M.D.
登録日2023-04-26
公開日2023-09-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Masked cerulenin enables a dual-site selective protein crosslink.
Chem Sci, 14, 2023
6OKC
DownloadVisualize
BU of 6okc by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C12-crypto Acyl Carrier Protein, AcpP
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 1, Acyl carrier protein, N-[2-(dodecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
著者Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
登録日2019-04-12
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
6OKF
DownloadVisualize
BU of 6okf by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C16-crypto Acyl Carrier Protein, AcpP
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 1, Acyl carrier protein, N-[2-(dodecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
著者Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
登録日2019-04-12
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
6OKG
DownloadVisualize
BU of 6okg by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C16-crypto Acyl Carrier Protein, AcpP
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 2, Acyl carrier protein, N-[2-(hexadecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
著者Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
登録日2019-04-12
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
6OLT
DownloadVisualize
BU of 6olt by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C12-crypto Acyl Carrier Protein, AcpP
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 2, Acyl carrier protein, N-[2-(dodecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
著者Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
登録日2019-04-17
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
1BGG
DownloadVisualize
BU of 1bgg by Molmil
GLUCOSIDASE A FROM BACILLUS POLYMYXA COMPLEXED WITH GLUCONATE
分子名称: BETA-GLUCOSIDASE A, D-gluconic acid
著者Sanz-Aparicio, J, Hermoso, J, Martinez-Ripoll, M, Polaina, J.
登録日1997-05-12
公開日1998-05-27
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of beta-glucosidase A from Bacillus polymyxa: insights into the catalytic activity in family 1 glycosyl hydrolases.
J.Mol.Biol., 275, 1998
1BGA
DownloadVisualize
BU of 1bga by Molmil
BETA-GLUCOSIDASE A FROM BACILLUS POLYMYXA
分子名称: BETA-GLUCOSIDASE A
著者Sanz-Aparicio, J, Hermoso, J.A, Martinez-Ripoll, M, Polaina, J.
登録日1997-04-04
公開日1998-04-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of beta-glucosidase A from Bacillus polymyxa: insights into the catalytic activity in family 1 glycosyl hydrolases.
J.Mol.Biol., 275, 1998
1K72
DownloadVisualize
BU of 1k72 by Molmil
The X-ray Crystal Structure Of Cel9G Complexed With cellotriose
分子名称: CALCIUM ION, Endoglucanase 9G, GLYCEROL, ...
著者Mandelman, D, Belaich, A, Belaich, J.P, Aghajari, N, Driguez, H, Haser, R.
登録日2001-10-18
公開日2003-07-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-Ray Crystal Structure of the Multidomain Endoglucanase Cel9G from Clostridium cellulolyticum Complexed with Natural and Synthetic Cello-Oligosaccharides
J.BACTERIOL., 185, 2003
1G87
DownloadVisualize
BU of 1g87 by Molmil
THE CRYSTAL STRUCTURE OF ENDOGLUCANASE 9G FROM CLOSTRIDIUM CELLULOLYTICUM
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDOCELLULASE 9G, ...
著者Mandelman, D, Belaich, A, Belaich, J.P, Aghajari, N, Driguez, H, Haser, R.
登録日2000-11-16
公開日2003-07-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-Ray Crystal Structure of the Multidomain Endoglucanase Cel9G from Clostridium cellulolyticum Complexed with Natural and Synthetic Cello-Oligosaccharides
J.BACTERIOL., 185, 2003
1KFG
DownloadVisualize
BU of 1kfg by Molmil
The X-ray Crystal Structure of Cel9G from Clostridium cellulolyticum complexed with a Thio-Oligosaccharide Inhibitor
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-thio-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-1-thio-beta-D-glucopyranose, CALCIUM ION, ...
著者Mandelman, D, Belaich, A, Belaich, J.-P, Driguez, H, Haser, R.
登録日2001-11-20
公開日2003-07-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The X-ray crystal structure of the multidomain endoglucanase Cel9G from Clostridium cellulolyticum complexed with natural and synthetic cello-olligosaccharides
J.Bacteriol., 185, 2003
1GA2
DownloadVisualize
BU of 1ga2 by Molmil
THE CRYSTAL STRUCTURE OF ENDOGLUCANASE 9G FROM CLOSTRIDIUM CELLULOLYTICUM COMPLEXED WITH CELLOBIOSE
分子名称: ACETIC ACID, CALCIUM ION, ENDOGLUCANASE 9G, ...
著者Mandelman, D, Belaich, A, Belaich, J.P, Aghajari, N, Driguez, H, Haser, R.
登録日2000-11-29
公開日2003-07-22
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-Ray Crystal Structure of the Multidomain Endoglucanase Cel9G from Clostridium cellulolyticum Complexed with Natural and Synthetic Cello-Oligosaccharides
J.BACTERIOL., 185, 2003
6CJN
DownloadVisualize
BU of 6cjn by Molmil
Crystal Structure of Chalcone Isomerase from Medicago Sativa with the G95T mutation
分子名称: Chalcone--flavonone isomerase 1, SULFATE ION
著者Burke, J.R, La Clair, J.J, Philippe, R.N, Pabis, A, Jez, J.M, Cortina, G, Kaltenbach, M, Bowman, M.E, Woods, K.B, Nelson, A.T, Tawfik, D.S, Kamerlin, S.C.L, Noel, J.P.
登録日2018-02-26
公開日2019-03-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Bifunctional Substrate Activation via an Arginine Residue Drives Catalysis in Chalcone Isomerases
Acs Catalysis, 2019
1G43
DownloadVisualize
BU of 1g43 by Molmil
CRYSTAL STRUCTURE OF A FAMILY IIIA CBD FROM CLOSTRIDIUM CELLULOLYTICUM
分子名称: CALCIUM ION, SCAFFOLDING PROTEIN, ZINC ION
著者Shimon, L.J.W, Pages, S, Belaich, A, Belaich, J.-P, Bayer, E.A, Lamed, R, Shoham, Y, Frolow, F.
登録日2000-10-26
公開日2000-12-01
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a family IIIa scaffoldin CBD from the cellulosome of Clostridium cellulolyticum at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon