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PDB: 1038 results

4CUS
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BU of 4cus by Molmil
Crystal structure of human BAZ2B in complex with fragment-4 N09496
Descriptor: 1,2-ETHANEDIOL, BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B, quinolin-4-ol
Authors:Bradley, A.R, Liu, Y, Krojer, T, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, von Delft, F.
Deposit date:2014-03-21
Release date:2014-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.783 Å)
Cite:Crystal Structure of Human Baz2B in Complex with Fragment-4 N09496
To be Published
4CUT
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BU of 4cut by Molmil
Crystal structure of human BAZ2B in complex with fragment-5 N09428
Descriptor: 1,2-ETHANEDIOL, BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B, N-(4-HYDROXYPHENYL)ACETAMIDE (TYLENOL)
Authors:Bradley, A.R, Liu, Y, Krojer, T, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, von Delft, F.
Deposit date:2014-03-21
Release date:2014-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.835 Å)
Cite:Crystal Structure of Human Baz2B in Complex with Fragment-5 N09428
To be Published
4D0Q
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BU of 4d0q by Molmil
Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase
Descriptor: 1,2-ETHANEDIOL, HYALURONATE LYASE
Authors:Suits, M.D.L, Pluvinage, B, Law, A, Liu, Y, Palma, A.S, Chai, W, Feizi, T, Boraston, A.B.
Deposit date:2014-04-29
Release date:2014-08-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Conformational Analysis of the Streptococcus Pneumoniae Hyaluronate Lyase and Characterization of its Hyaluronan-Specific Carbohydrate-Binding Module.
J.Biol.Chem., 289, 2014
8Z0K
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BU of 8z0k by Molmil
Cryo-EM structure of Cas8-HNH system at full R-loop state
Descriptor: DNA (37-MER), DNA (5'-D(P*GP*TP*GP*CP*GP*GP*A)-3'), HNH endonuclease, ...
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-04-09
Release date:2024-10-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 43, 2024
1Q67
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BU of 1q67 by Molmil
Crystal structure of Dcp1p
Descriptor: Decapping protein involved in mRNA degradation-Dcp1p
Authors:She, M, Decker, C.J, Liu, Y, Chen, N, Parker, R, Song, H.
Deposit date:2003-08-12
Release date:2004-03-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Dcp1p and its functional implications in mRNA decapping
Nat.Struct.Mol.Biol., 11, 2004
8Z0L
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BU of 8z0l by Molmil
Cryo-EM structure of Cas8-HNH system at partial R-loop state
Descriptor: DNA (32-MER), DNA (5'-D(P*GP*TP*GP*CP*GP*GP*A)-3'), HNH endonuclease, ...
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-04-09
Release date:2024-10-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 43, 2024
2PQW
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BU of 2pqw by Molmil
Crystal structure of L3MBTL1 in complex with H4K20Me2 (residues 17-25), trigonal form
Descriptor: ACETATE ION, Histone H4, Lethal(3)malignant brain tumor-like protein
Authors:Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2007-05-02
Release date:2007-07-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
2APQ
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BU of 2apq by Molmil
Crystal Structure of an Active Site Mutant of Bovine Pancreatic Ribonuclease A (H119A-RNase A) with a 10-Glutamine expansion in the C-terminal hinge-loop.
Descriptor: PHOSPHATE ION, Ribonuclease
Authors:Sambashivan, S, Liu, Y, Sawaya, M.R, Gingery, M, Eisenberg, D.
Deposit date:2005-08-16
Release date:2005-09-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Amyloid-like fibrils of ribonuclease A with three-dimensional domain-swapped and native-like structure.
Nature, 437, 2005
6UPL
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BU of 6upl by Molmil
Structure of FACT_subnucleosome complex 2
Descriptor: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ...
Authors:Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K.
Deposit date:2019-10-17
Release date:2019-12-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:FACT caught in the act of manipulating the nucleosome.
Nature, 577, 2020
6UPK
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BU of 6upk by Molmil
Structure of FACT_subnucleosome complex 1
Descriptor: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ...
Authors:Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K.
Deposit date:2019-10-17
Release date:2019-12-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:FACT caught in the act of manipulating the nucleosome.
Nature, 577, 2020
4R5Y
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BU of 4r5y by Molmil
The complex structure of Braf V600E kinase domain with a novel Braf inhibitor
Descriptor: 5-({(1R,1aS,6bR)-1-[5-(trifluoromethyl)-1H-benzimidazol-2-yl]-1a,6b-dihydro-1H-cyclopropa[b][1]benzofuran-5-yl}oxy)-3,4-dihydro-1,8-naphthyridin-2(1H)-one, Serine/threonine-protein kinase B-raf
Authors:Feng, Y, Peng, H, Zhang, Y, Liu, Y, Wei, M.
Deposit date:2014-08-22
Release date:2016-02-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:BGB-283, a Novel RAF Kinase and EGFR Inhibitor, Displays Potent Antitumor Activity in BRAF-Mutated Colorectal Cancers.
Mol.Cancer Ther., 14, 2015
1SIY
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BU of 1siy by Molmil
NMR structure of mung bean non-specific lipid transfer protein 1
Descriptor: Nonspecific lipid-transfer protein 1
Authors:Lin, K.F, Liu, Y.N, Hsu, S.T.D, Samuel, D, Cheng, C.S, Bonvin, A.M.J.J, Lyu, P.C.
Deposit date:2004-03-02
Release date:2005-04-05
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Characterization and Structural Analyses of Nonspecific Lipid Transfer Protein 1 from Mung Bean
Biochemistry, 44, 2005
2RJC
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BU of 2rjc by Molmil
Crystal structure of L3MBTL1 protein in complex with MES
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lethal(3)malignant brain tumor-like protein, SULFATE ION
Authors:Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2007-10-14
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
4RYP
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BU of 4ryp by Molmil
Crystal Structure of T. Brucei Farnesyl Diphosphate Synthase
Descriptor: Farnesyl pyrophosphate synthase
Authors:Cao, R, Liu, Y.-L, Oldfield, E.
Deposit date:2014-12-16
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Farnesyl diphosphate synthase inhibitors with unique ligand-binding geometries.
ACS Med Chem Lett, 6, 2015
4RXD
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BU of 4rxd by Molmil
T. Brucei Farnesyl Diphosphate Synthase Complexed with Risedronate
Descriptor: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, Farnesyl pyrophosphate synthase, MAGNESIUM ION
Authors:Cao, R, Liu, Y.-L, Oldfield, E.
Deposit date:2014-12-10
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Farnesyl diphosphate synthase inhibitors with unique ligand-binding geometries.
ACS Med Chem Lett, 6, 2015
2RJF
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BU of 2rjf by Molmil
Crystal structure of L3MBTL1 in complex with H4K20Me2 (residues 12-30), orthorhombic form I
Descriptor: Histone H4, Lethal(3)malignant brain tumor-like protein
Authors:Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2007-10-14
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
2RJE
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BU of 2rje by Molmil
Crystal structure of L3MBTL1 in complex with H4K20Me2 (residues 17-25), orthorhombic form II
Descriptor: CHLORIDE ION, Histone H4, Lethal(3)malignant brain tumor-like protein
Authors:Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2007-10-14
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
3UAF
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BU of 3uaf by Molmil
Crystal Structure of a TTR-52 mutant of C. elegans
Descriptor: TTR-52
Authors:Kang, Y.Y, Zhao, D.F, Liang, H.H, Liu, B, Liu, Q.W, Wang, X.C, Liu, Y.F.
Deposit date:2011-10-21
Release date:2012-10-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural study of TTR-52 reveals the mechanism by which a bridging molecule mediates apoptotic cell engulfment
Genes Dev., 26, 2012
3TI8
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BU of 3ti8 by Molmil
Crystal structure of influenza A virus neuraminidase N5 complexed with laninamivir
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-D-glycero-D-galacto-non-2-enonic acid, ...
Authors:Vavricka, C.J, Li, Q, Wu, Y, Qi, J, Wang, M, Liu, Y, Gao, F, Liu, J, Feng, E, He, J, Wang, J, Liu, H, Jiang, H, Gao, G.F.
Deposit date:2011-08-20
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structural and functional analysis of laninamivir and its octanoate prodrug reveals group specific mechanisms for influenza NA inhibition
Plos Pathog., 7, 2011
1ZKN
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BU of 1zkn by Molmil
Structure of PDE4D2-IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, MAGNESIUM ION, ZINC ION, ...
Authors:Huai, Q, Liu, Y, Francis, S.H, Corbin, J.D, Ke, H.
Deposit date:2005-05-03
Release date:2005-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Phosphodiesterases 4 and 5 in Complex with Inhibitor 3-Isobutyl-1-Methylxanthine Suggest a Conformation Determinant of Inhibitor Selectivity
J.Biol.Chem., 279, 2004
1RKP
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BU of 1rkp by Molmil
Crystal structure of PDE5A1-IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, MAGNESIUM ION, ZINC ION, ...
Authors:Huai, Q, Liu, Y, Francis, S.H, Corbin, J.D, Ke, H.
Deposit date:2003-11-22
Release date:2004-03-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of phosphodiesterases 4 and 5 in complex with inhibitor IBMX suggest a conformation determinant of inhibitor selectivity
J.Biol.Chem., 279, 2004
1GHE
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BU of 1ghe by Molmil
CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A
Descriptor: ACETYL COENZYME *A, ACETYLTRANSFERASE
Authors:He, H, Ding, Y, Bartlam, M, Sun, F, Le, Y, Qin, X, Tang, H, Zhang, R, Joachimiak, A, Liu, Y, Zhao, N, Rao, Z.
Deposit date:2000-12-13
Release date:2003-01-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Tabtoxin Resistance Protein Complexed with Acetyl Coenzyme A Reveals the Mechanism for beta-Lactam Acetylation
J.Mol.Biol., 325, 2003
1UJ1
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BU of 1uj1 by Molmil
Crystal structure of SARS Coronavirus Main Proteinase (3CLpro)
Descriptor: 3C-like proteinase
Authors:Yang, H, Yang, M, Liu, Y, Bartlam, M, Ding, Y, Lou, Z, Sun, L, Zhou, Z, Ye, S, Anand, K, Pang, H, Gao, G.F, Hilgenfeld, R, Rao, Z.
Deposit date:2003-07-25
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK2
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BU of 1uk2 by Molmil
Crystal structure of SARS Coronavirus Main Proteinase (3CLpro) At pH8.0
Descriptor: 3C-LIKE PROTEINASE
Authors:Yang, H, Yang, M, Liu, Y, Bartlam, M, Ding, Y, Lou, Z, Sun, L, Zhou, Z, Ye, S, Anand, K, Pang, H, Gao, G.F, Hilgenfeld, R, Rao, Z.
Deposit date:2003-08-14
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003
1UK3
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BU of 1uk3 by Molmil
Crystal structure of SARS Coronavirus Main Proteinase (3CLpro) At pH7.6
Descriptor: 3C-like proteinase
Authors:Yang, H, Yang, M, Liu, Y, Bartlam, M, Ding, Y, Lou, Z, Sun, L, Zhou, Z, Ye, S, Anand, K, Pang, H, Gao, G.F, Hilgenfeld, R, Rao, Z.
Deposit date:2003-08-14
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor
Proc.Natl.Acad.Sci.USA, 100, 2003

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