Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 985 results

6LHF
DownloadVisualize
BU of 6lhf by Molmil
Crystal structure of chicken cCD8aa/pBF2*15:01
Descriptor: Beta-2-microglobulin, CD8 alpha chain, MHC class I, ...
Authors:Liu, Y.J, Xia, C.
Deposit date:2019-12-08
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Combination of CD8 alpha alpha and Peptide-MHC-I in a Face-to-Face Mode Promotes Chicken gamma delta T Cells Response.
Front Immunol, 11, 2020
6LHG
DownloadVisualize
BU of 6lhg by Molmil
Crystal structure of chicken cCD8aa/pBF2*04:01
Descriptor: Beta-2-microglobulin, CD8 alpha chain, IE8 peptide, ...
Authors:Liu, Y.J, Xia, C.
Deposit date:2019-12-08
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Combination of CD8 alpha alpha and Peptide-MHC-I in a Face-to-Face Mode Promotes Chicken gamma delta T Cells Response.
Front Immunol, 11, 2020
3SGU
DownloadVisualize
BU of 3sgu by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-iodo-UMP
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-06-15
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-iodo-UMP
To be Published
4GZN
DownloadVisualize
BU of 4gzn by Molmil
Mouse ZFP57 zinc fingers in complex with methylated DNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Liu, Y, Zhang, X, Cheng, X.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence.
Genes Dev., 26, 2012
4OR6
DownloadVisualize
BU of 4or6 by Molmil
Structure of Influenza B PB2 cap-binding domain with Q325F mutation complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Polymerase basic protein 2
Authors:Liu, Y, Fan, J, Zheng, X.
Deposit date:2014-02-11
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:The crystal structure of the PB2 cap-binding domain of influenza B virus reveals a novel cap recognition mechanism.
J.Biol.Chem., 290, 2015
4OR4
DownloadVisualize
BU of 4or4 by Molmil
Structure of Influenza B PB2 cap-binding domain with Q325F mutation complex with m7GDP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Polymerase basic protein 2
Authors:Liu, Y, Fan, J, Zheng, X.
Deposit date:2014-02-10
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The crystal structure of the PB2 cap-binding domain of influenza B virus reveals a novel cap recognition mechanism.
J.Biol.Chem., 290, 2015
3SW6
DownloadVisualize
BU of 3sw6 by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-azido-UMP
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-07-13
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-azido-UMP
To be Published
7BWN
DownloadVisualize
BU of 7bwn by Molmil
Crystal Structure of a Designed Protein Heterocatenane
Descriptor: Cellular tumor antigen p53, Chimera of Green fluorescent protein and p53dim
Authors:Liu, Y.J, Duan, Z.L, Fang, J, Zhang, F, Xiao, J.Y, Zhang, W.B.
Deposit date:2020-04-15
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Cellular Synthesis and X-ray Crystal Structure of a Designed Protein Heterocatenane.
Angew.Chem.Int.Ed.Engl., 59, 2020
2L8O
DownloadVisualize
BU of 2l8o by Molmil
Solution structure of Chr148 from Cytophaga hutchinsonii, Northeast Structural Genomics Consortium Target Chr148
Descriptor: Activator of Hsp90 ATPase homologue 1-like C-terminal domain-containing protein
Authors:Liu, Y, Lee, D, Ciccosanti, C, Nair, L, Rost, B, Acton, T, Xiao, R, Everett, J, Montelione, G, Prestegard, J, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-01-21
Release date:2011-03-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Chr148 from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target Chr148
To be Published
3S9Y
DownloadVisualize
BU of 3s9y by Molmil
Crystal Structure of P. falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP in space group P21, produced from 5-fluoro-6-azido-UMP
Descriptor: 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), DI(HYDROXYETHYL)ETHER, HEXAETHYLENE GLYCOL, ...
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-06-02
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-activity relationships of orotidine-5'-monophosphate decarboxylase inhibitors as anticancer agents.
J.Med.Chem., 52, 2009
3TEJ
DownloadVisualize
BU of 3tej by Molmil
Crystal structure of a domain fragment involved in peptide natural product biosynthesis
Descriptor: Enterobactin synthase component F
Authors:Liu, Y, Zheng, T, Bruner, S.D.
Deposit date:2011-08-15
Release date:2012-01-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for phosphopantetheinyl carrier domain interactions in the terminal module of nonribosomal peptide synthetases.
Chem.Biol., 18, 2011
3THQ
DownloadVisualize
BU of 3thq by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-AMINOURIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-08-19
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
To be Published
4O62
DownloadVisualize
BU of 4o62 by Molmil
CW-type zinc finger of ZCWPW2 in complex with the amino terminus of histone H3
Descriptor: Histone H3.3, UNKNOWN ATOM OR ION, ZINC ION, ...
Authors:Liu, Y, Tempel, W, Dong, A, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-20
Release date:2014-03-26
Last modified:2016-06-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins.
J.Biol.Chem., 291, 2016
3VAC
DownloadVisualize
BU of 3vac by Molmil
Crystal Structure of the CFA/I Enterotoxigenic E. coli adhesin CfaE mutant G168D
Descriptor: CFA/I fimbrial subunit E
Authors:Liu, Y, Esser, L, Xia, D.
Deposit date:2011-12-29
Release date:2013-02-20
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Tight Conformational Coupling between the Domains of the Enterotoxigenic Escherichia coli Fimbrial Adhesin CfaE Regulates Binding State Transition.
J.Biol.Chem., 288, 2013
3VFO
DownloadVisualize
BU of 3vfo by Molmil
crystal structure of HLA B*3508 LPEP157A, HLA mutant Ala157
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, LPEPLPQGQLTAY, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
5YVX
DownloadVisualize
BU of 5yvx by Molmil
Crystal structure of SDG8 CW domain in complex with H3K4me1 peptide
Descriptor: H3K4me1, Histone-lysine N-methyltransferase ASHH2, ZINC ION
Authors:Liu, Y, Huang, Y.
Deposit date:2017-11-27
Release date:2018-03-14
Last modified:2018-05-09
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:Uncovering the mechanistic basis for specific recognition of monomethylated H3K4 by the CW domain ofArabidopsishistone methyltransferase SDG8.
J. Biol. Chem., 293, 2018
3VFM
DownloadVisualize
BU of 3vfm by Molmil
crystal structure of HLA B*3508 LPEP155A, HLA mutant Ala155
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, LPEPLPQGQLTAY, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
3VFV
DownloadVisualize
BU of 3vfv by Molmil
crystal structure of HLA B*3508 LPEP-P9Ala, peptide mutant P9-ala
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, P9A, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
3VFW
DownloadVisualize
BU of 3vfw by Molmil
crystal structure of HLA B*3508 LPEP-P10Ala, peptide mutant P10-ala
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, P10A, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
3VFT
DownloadVisualize
BU of 3vft by Molmil
crystal structure of HLA B*3508LPEP-P6Ala, peptide mutant P6-ala
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, P6A, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.947 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
3VFS
DownloadVisualize
BU of 3vfs by Molmil
crystal structure of HLA B*3508LPEP-P5Ala , peptide mutant P5-ala
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, P5A, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
3VFU
DownloadVisualize
BU of 3vfu by Molmil
crystal structure of HLA B*3508 LPEP-P7Ala, peptide mutant P7-ala
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, P7A, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
3VFP
DownloadVisualize
BU of 3vfp by Molmil
crystal structure of HLA B*3508 LPEP158G, HLA mutant Gly158
Descriptor: ACETATE ION, Beta-2-microglobulin, LPEP peptide from EBV, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
3VFR
DownloadVisualize
BU of 3vfr by Molmil
crystal structure of HLA B*3508LPEP-P4Ala, peptide mutant P4-ala
Descriptor: Beta-2-microglobulin, LPEP peptide from EBV, P4A, ...
Authors:Liu, Y.C, Rossjohn, J, Gras, S.
Deposit date:2012-01-10
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Energetic Basis Underpinning T-cell Receptor Recognition of a Super-bulged Peptide Bound to a Major Histocompatibility Complex Class I Molecule.
J.Biol.Chem., 287, 2012
2KSQ
DownloadVisualize
BU of 2ksq by Molmil
The myristoylated yeast ARF1 in a GTP and bicelle bound conformation
Descriptor: ADP-ribosylation factor 1, GUANOSINE-5'-TRIPHOSPHATE, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
Authors:Liu, Y, Kahn, R, Prestegard, J.
Deposit date:2010-01-12
Release date:2010-07-07
Last modified:2011-07-27
Method:SOLUTION NMR
Cite:Dynamic structure of membrane-anchored Arf*GTP.
Nat.Struct.Mol.Biol., 17, 2010

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon