Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 985 件

7C0G
DownloadVisualize
BU of 7c0g by Molmil
Aca1 in complex with 14bp palindromic DNA target
分子名称: Aca1, palindromic DNA target
著者Liu, Y.H, Zhang, L.S, Wu, B.X, Huang, H.D.
登録日2020-05-01
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Aca1 in complex with 14bp palindromic DNA target
To Be Published
4P0V
DownloadVisualize
BU of 4p0v by Molmil
Crystal structure of human farnesyl diphosphoate synthase in complex with zoledronate and taxodione
分子名称: (5beta)-11-hydroxyabieta-7,9(11),13-triene-6,12-dione, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
著者Liu, Y.L, Oldfield, E.
登録日2014-02-23
公開日2014-07-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Taxodione and arenarone inhibit farnesyl diphosphate synthase by binding to the isopentenyl diphosphate site.
Proc.Natl.Acad.Sci.USA, 111, 2014
4P0X
DownloadVisualize
BU of 4p0x by Molmil
Human farnesyl diphosphate synthase in complex with Taxodione
分子名称: (5beta)-11-hydroxyabieta-7,9(11),13-triene-6,12-dione, Farnesyl pyrophosphate synthase
著者Liu, Y.L, Oldfield, E.
登録日2014-02-23
公開日2014-07-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Taxodione and arenarone inhibit farnesyl diphosphate synthase by binding to the isopentenyl diphosphate site.
Proc.Natl.Acad.Sci.USA, 111, 2014
4P0W
DownloadVisualize
BU of 4p0w by Molmil
Human farnesyl diphosphate synthase in complex with Arenarone and zoledronate
分子名称: 2-{[(1S,2R,4aS,8aR)-1,2,4a-trimethyl-5-methylidenedecahydronaphthalen-1-yl]methyl}cyclohexa-2,5-diene-1,4-dione, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
著者Liu, Y.L, Oldfield, E.
登録日2014-02-23
公開日2014-07-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献Taxodione and arenarone inhibit farnesyl diphosphate synthase by binding to the isopentenyl diphosphate site.
Proc.Natl.Acad.Sci.USA, 111, 2014
2KXY
DownloadVisualize
BU of 2kxy by Molmil
Solution structure of SuR18C from Streptococcus thermophilus. Northeast Structural Genomics Consortium Target SuR18C
分子名称: Uncharacterized protein
著者Liu, Y, Lee, H, Belote, R, Ciccosanti, C, Hamilton, K, Acton, T, Xiao, R, Everett, J, Montelione, G, Prestegard, J, Northeast Structural Genomics Consortium (NESG)
登録日2010-05-13
公開日2010-07-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of SuR18C from Streptococcus thermophilus. Northeast Structural Genomics Consortium Target SuR18C
To be Published
2KJP
DownloadVisualize
BU of 2kjp by Molmil
Solution structure of protein YlbL (BSU15050) from Bacillus subtilis, Northeast Structural Genomics Consortium target sr713a
分子名称: Uncharacterized protein ylbL
著者Liu, Y, Belote, R, Ciccosanti, C, Hamilton, K, Nair, R, Rost, B, Acton, T, Xiao, R, Swapna, G, Everett, J, Montelione, G.T, Prestegard, J, Northeast Structural Genomics Consortium (NESG)
登録日2009-06-05
公開日2009-08-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of protein YlbL (BSU15050) from Bacillus subtilis, Northeast Structural Genomics Consortium target sr713a
To be Published
6KCP
DownloadVisualize
BU of 6kcp by Molmil
Shuguo PWWP in complex with ssDNA
分子名称: DNA (5'-D(P*TP*TP*TP*TP*T)-3'), LD23804p
著者Liu, Y.C, Huang, Y.
登録日2019-06-28
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Shuguo PWWP in complex with ssDNA
To Be Published
7DL5
DownloadVisualize
BU of 7dl5 by Molmil
Crystal structure of Thermotoga Maritima ferritin mutant at 2.3 Angstrom resolution
分子名称: FE (III) ION, Ferritin, MAGNESIUM ION
著者Liu, Y, Leng, X, Zang, J, Zhao, G.
登録日2020-11-26
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A short helix regulates conversion of dimeric and 24-meric ferritin architectures.
Int.J.Biol.Macromol., 203, 2022
6LB3
DownloadVisualize
BU of 6lb3 by Molmil
Crystal structure of PA4674 in complex with its operator DNA (18bp) from Pseudomonas aeruginosa
分子名称: DNA (5'-D(P*AP*CP*CP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*CP*GP*T)-3'), DNA (5'-D(P*AP*CP*GP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*GP*GP*T)-3'), HTH cro/C1-type domain-containing protein, ...
著者Liu, Y, Zhang, H, Gao, Z, Dong, Y.
登録日2019-11-13
公開日2020-11-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Crystal structure of PA4674 in complex with its operator DNA (18bp) from Pseudomonas aeruginosa
To Be Published
6BK6
DownloadVisualize
BU of 6bk6 by Molmil
Crystal structure of Hendra virus matrix protein
分子名称: ACETATE ION, Hendra virus matrix protein
著者Liu, Y.C.
登録日2017-11-07
公開日2018-04-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Electrostatic Interactions between Hendra Virus Matrix Proteins Are Required for Efficient Virus-Like-Particle Assembly.
J. Virol., 92, 2018
4NOX
DownloadVisualize
BU of 4nox by Molmil
Structure of the nine-bladed beta-propeller of eIF3b
分子名称: CHLORIDE ION, Eukaryotic translation initiation factor 3 subunit B
著者Liu, Y, Neumann, P, Kuhle, B, Monecke, T, Ficner, R.
登録日2013-11-20
公開日2014-09-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.722 Å)
主引用文献Translation initiation factor eIF3b contains a nine-bladed beta-propeller and interacts with the 40S ribosomal subunit
Structure, 22, 2014
6KCO
DownloadVisualize
BU of 6kco by Molmil
Shuguo PWWP in complex with ssDNA
分子名称: DNA (5'-D(*TP*CP*CP*CP*T)-3'), LD23804p
著者Liu, Y.C, Huang, Y.
登録日2019-06-28
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Shuguo PWWP in complex with ssDNA
To Be Published
4OJI
DownloadVisualize
BU of 4oji by Molmil
Crystal Structure of Twister Ribozyme
分子名称: MAGNESIUM ION, RNA (52-MER)
著者Liu, Y, Wilson, T.J, McPhee, S.A, Lilley, D.M.J.
登録日2014-01-21
公開日2014-07-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and mechanistic investigation of the twister ribozyme.
Nat.Chem.Biol., 10, 2014
4ORO
DownloadVisualize
BU of 4oro by Molmil
Structure of Influenza B PB2 cap-binding domain complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Polymerase PB2
著者Liu, Y, Zheng, X.
登録日2014-02-11
公開日2015-05-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of Influenza B PB2 cap-binding domain complex with GDP
to be published
6KD6
DownloadVisualize
BU of 6kd6 by Molmil
Shuguo PWWP domain
分子名称: LD23804p
著者Liu, Y.C, Huang, Y.
登録日2019-07-01
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Shuguo PWWP domain
To Be Published
7DZY
DownloadVisualize
BU of 7dzy by Molmil
Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 2490
分子名称: Fab Heavy chain of enhancing antibody 2490, Fab light chain of enhancing antibody 2490, Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
7DZW
DownloadVisualize
BU of 7dzw by Molmil
Apo spike protein from SARS-CoV2
分子名称: Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
7DZX
DownloadVisualize
BU of 7dzx by Molmil
Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 8D2
分子名称: Fab Heavy chain of enhancing antibody, Fab light chain of enhancing antibody, Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
7DZN
DownloadVisualize
BU of 7dzn by Molmil
Crystal Structure of the cross-restricted T18A TCR and HLAB4201 bound to HIV-1 Gag TL9 peptide
分子名称: Beta-2-microglobulin, Gag-Pol polyprotein, MHC class I antigen, ...
著者Liu, Y, Yin, L.
登録日2021-01-25
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Cross-reactive TCR with alloreactivity for immunodominant HIV-1 epitope Gag TL9 with enhanced control of viral infection
Biorxiv, 2021
7DZM
DownloadVisualize
BU of 7dzm by Molmil
Crystal Structure of the cross-restricted T18A TCR and HLAB8101 bound to HIV-1 Gag TL9 peptide
分子名称: Beta-2-microglobulin, Gag-Pol polyprotein, MHC class I antigen, ...
著者Liu, Y, Yin, L.
登録日2021-01-25
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Cross-reactive TCR with alloreactivity for immunodominant HIV-1 epitope Gag TL9 with enhanced control of viral infection
Biorxiv, 2021
6KCU
DownloadVisualize
BU of 6kcu by Molmil
Shuguo PWWP domain
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, LD23804p
著者Liu, Y.C, Huang, Y.
登録日2019-06-29
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Shuguo PWWP domain
To Be Published
7WDL
DownloadVisualize
BU of 7wdl by Molmil
Fungal immunomodulatory protein FIP-nha
分子名称: Fungal immunomodulatory protein
著者Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
登録日2021-12-22
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties.
Int.J.Biol.Macromol., 213, 2022
7WDM
DownloadVisualize
BU of 7wdm by Molmil
Fungal immunomodulatory protein FIP-gmi
分子名称: Immunomodulatory protein
著者Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
登録日2021-12-22
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.123 Å)
主引用文献Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties
To Be Published
6K02
DownloadVisualize
BU of 6k02 by Molmil
Crystal structure of ceNAP1 core
分子名称: Nucleosome Assembly Protein, ZINC ION
著者Liu, Y.R.
登録日2019-05-05
公開日2019-10-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.162 Å)
主引用文献Crystal structure of xlH2A-H2B
Structure, 2019
7XC5
DownloadVisualize
BU of 7xc5 by Molmil
Crystal structure of the ANK domain of CLPB
分子名称: Isoform 2 of Caseinolytic peptidase B protein homolog
著者Liu, Y, Wu, D, Lu, G, Gao, N, Lin, J.
登録日2022-03-23
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Comprehensive structural characterization of the human AAA+ disaggregase CLPB in the apo- and substrate-bound states reveals a unique mode of action driven by oligomerization.
Plos Biol., 21, 2023

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon