Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 985 件

8K4O
DownloadVisualize
BU of 8k4o by Molmil
Cryo-EM structure of Kaposi's Sarcoma-Associated Herpesvirus-G Protein-Coupled Receptor (KSHV-GPCR)in complex with CXC chemokine CXCL1
分子名称: G protein-coupled receptor, Growth-regulated alpha protein, Guanine nucleotide-binding protein G(I) subunit alpha-1, ...
著者Liu, Y.Z, Liu, A.J.
登録日2023-07-20
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Cryo-EM structure of Kaposi's Sarcoma Herpesvirus GPCR (KSHV-GPCR)in complex with CXCL1
To Be Published
8K4P
DownloadVisualize
BU of 8k4p by Molmil
Cryo-EM structure of an active Kaposi's Sarcoma-Associated Herpesvirus-G Protein-Coupled Receptor (KSHV-GPCR) in complex with Gi protein
分子名称: G protein-coupled receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者Liu, Y.Z, Liu, A.J.
登録日2023-07-20
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Cryo-EM structure of active Kaposi's Sarcoma-Associated Herpesvirus-G Protein-Coupled Receptor (KSHV-GPCR) in complex with Gi protein
To Be Published
1TI5
DownloadVisualize
BU of 1ti5 by Molmil
Solution structure of plant defensin
分子名称: plant defensin
著者Liu, Y.J, Cheng, C.S, Liu, Y.N, Hsu, M.P, Chen, C.S, Lyu, P.C.
登録日2004-06-02
公開日2005-07-26
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of the plant defensin VrD1 from mung bean and its possible role in insecticidal activity against bruchids.
Proteins, 63, 2006
2WDW
DownloadVisualize
BU of 2wdw by Molmil
The Native Crystal Structure of the Primary Hexose Oxidase (Dbv29) in Antibiotic A40926 Biosynthesis
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PUTATIVE HEXOSE OXIDASE
著者Liu, Y.-C, Li, Y.-S, Lyu, S.-Y, Chen, Y.-H, Chan, H.-C, Huang, C.-J, Huang, Y.-T, Chen, G.-H, Chou, C.-C, Tsai, M.-D, Li, T.-L.
登録日2009-03-27
公開日2010-04-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Interception of Teicoplanin Oxidation Intermediates Yields New Antimicrobial Scaffolds
Nat.Chem.Biol., 7, 2011
1JQ1
DownloadVisualize
BU of 1jq1 by Molmil
POTASSIUM CHANNEL (KCSA) OPEN GATE MODEL
分子名称: VOLTAGE-GATED POTASSIUM CHANNEL
著者Liu, Y.-S, Sompornpisut, P, Perozo, E.
登録日2001-08-03
公開日2001-10-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the KcsA channel intracellular gate in the open state.
Nat.Struct.Biol., 8, 2001
6CV5
DownloadVisualize
BU of 6cv5 by Molmil
CryoEM structure of human enterovirus D68 full particle (after incubation with low molecular weight heparin)
分子名称: viral protein 1, viral protein 2, viral protein 3, ...
著者Liu, Y, Rossmann, M.G.
登録日2018-03-27
公開日2019-07-24
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
6CV4
DownloadVisualize
BU of 6cv4 by Molmil
CryoEM structure of human enterovirus D68 emptied particle (after incubation with low molecular weight heparin)
分子名称: viral protein 1, viral protein 2, viral protein 3
著者Liu, Y, Rossmann, M.G.
登録日2018-03-27
公開日2019-07-24
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
6CRS
DownloadVisualize
BU of 6crs by Molmil
CryoEM structure of human enterovirus D68 A-particle (pH 7.2 and 4 degrees Celsius)
分子名称: viral protein 1, viral protein 2, viral protein 3
著者Liu, Y, Rossmann, M.G.
登録日2018-03-19
公開日2018-12-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Molecular basis for the acid-initiated uncoating of human enterovirus D68.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2I8N
DownloadVisualize
BU of 2i8n by Molmil
Solution structure of the second bromodomain of Brd4
分子名称: Bromodomain-containing protein 4
著者Liu, Y, Wu, J.H, Shi, Y.Y.
登録日2006-09-02
公開日2007-09-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second bromodomain of Brd4
To be Published
5V00
DownloadVisualize
BU of 5v00 by Molmil
Structure of HutD from Pseudomonas fluorescens SBW25 (Formate condition)
分子名称: FORMIC ACID, GLYCEROL, Uncharacterized protein
著者Liu, Y, Johnston, J.M, Gerth, M.L, Baker, E.N, Lott, J.S, Rainey, P.B.
登録日2017-02-27
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a bicupin protein HutD involved in histidine utilization in Pseudomonas.
Proteins, 85, 2017
5UK1
DownloadVisualize
BU of 5uk1 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
登録日2017-01-19
公開日2017-05-31
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5JZG
DownloadVisualize
BU of 5jzg by Molmil
CryoEM structure of the native empty particle of a human rhinovirus C
分子名称: Capsid protein VP0, Capsid protein VP1, Capsid protein VP3
著者Liu, Y, Hill, M.G, Klose, T, Chen, Z, Watters, K.E, Jiang, W, Palmenberg, A.C, Rossmann, M.G.
登録日2016-05-16
公開日2016-07-13
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Atomic structure of a rhinovirus C, a virus species linked to severe childhood asthma.
Proc.Natl.Acad.Sci.USA, 113, 2016
4QQG
DownloadVisualize
BU of 4qqg by Molmil
Crystal structure of an N-terminal HTATIP fragment
分子名称: Histone acetyltransferase KAT5, UNKNOWN ATOM OR ION
著者Liu, Y, Tempel, W, Wernimont, A.K, Dobrovetsky, E, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2014-06-27
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and histone binding studies of the chromo barrel domain of TIP60.
FEBS Lett., 592, 2018
4QQ6
DownloadVisualize
BU of 4qq6 by Molmil
Crystal Structure of tudor domain of SMN1 in complex with a small organic molecule
分子名称: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Survival motor neuron protein, UNKNOWN ATOM OR ION
著者Liu, Y, Tempel, W, Iqbal, A, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Structural Genomics Consortium (SGC)
登録日2014-06-26
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
4QQD
DownloadVisualize
BU of 4qqd by Molmil
Crystal Structure of tandem tudor domains of UHRF1 in complex with a small organic molecule
分子名称: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, E3 ubiquitin-protein ligase UHRF1, UNKNOWN ATOM OR ION
著者Liu, Y, Tempel, W, Iqbal, A, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Structural Genomics Consortium (SGC)
登録日2014-06-27
公開日2014-08-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
4RGY
DownloadVisualize
BU of 4rgy by Molmil
Structural and functional analysis of a low-temperature-active alkaline esterase from South China Sea marine sediment microbial metagenomic library
分子名称: Esterase
著者Liu, Y.
登録日2014-10-01
公開日2015-09-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and functional analysis of a low-temperature-active alkaline esterase from South China Sea marine sediment microbial metagenomic library.
J Ind Microbiol Biotechnol, 42, 2015
4RZH
DownloadVisualize
BU of 4rzh by Molmil
Crystal structure of FabG from Synechocystis sp. PCC 6803
分子名称: 3-oxoacyl-[acyl-carrier protein] reductase
著者Liu, Y, Xue, S.
登録日2014-12-22
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-directed construction of a high-performance version of the enzyme FabG from the photosynthetic microorganism Synechocystis sp. PCC 6803.
Febs Lett., 589, 2015
4ROJ
DownloadVisualize
BU of 4roj by Molmil
Crystal Structure of the VAV2 SH2 domain in complex with TXNIP phosphorylated peptide
分子名称: Guanine nucleotide exchange factor VAV2, Thioredoxin-interacting protein, UNKNOWN ATOM OR ION
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2014-10-28
公開日2014-12-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of the VAV2 SH2 domain in complex with TXNIP phosphorylated peptide
TO BE PUBLISHED
4QQ4
DownloadVisualize
BU of 4qq4 by Molmil
CW-type zinc finger of MORC3 in complex with the amino terminus of histone H3
分子名称: CHLORIDE ION, Histone H3.3, MORC family CW-type zinc finger protein 3, ...
著者Liu, Y, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2014-06-26
公開日2014-08-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins.
J.Biol.Chem., 291, 2016
4RXA
DownloadVisualize
BU of 4rxa by Molmil
Crystal structure of human farnesyl diphosphate synthase in complex with BPH-1358
分子名称: Farnesyl pyrophosphate synthase, N,N'-bis[3-(4,5-dihydro-1H-imidazol-2-yl)phenyl]biphenyl-4,4'-dicarboxamide, PHOSPHATE ION
著者Liu, Y.-L, Cao, R, Wang, Y, Oldfield, E.
登録日2014-12-09
公開日2015-04-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Farnesyl diphosphate synthase inhibitors with unique ligand-binding geometries.
ACS Med Chem Lett, 6, 2015
1NEZ
DownloadVisualize
BU of 1nez by Molmil
The Crystal Structure of a TL/CD8aa Complex at 2.1A resolution:Implications for Memory T cell Generation, Co-receptor Preference and Affinity
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
著者Liu, Y, Xiong, Y, Naidenko, O.V, Liu, J.H, Zhang, R, Joachimiak, A, Kronenberg, M, Cheroutre, H, Reinherz, E.L, Wang, J.H.
登録日2002-12-12
公開日2003-04-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of a TL/CD8alphaalpha Complex at 2.1 A resolution: Implications for modulation of T cell activation and memory
Immunity, 18, 2003
6X9H
DownloadVisualize
BU of 6x9h by Molmil
Molecular mechanism and structural basis of small-molecule modulation of acid-sensing ion channel 1 (ASIC1)
分子名称: 2-[4-(3,4-dimethoxyphenoxy)phenyl]-1H-benzimidazole-6-carboximidamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid-sensing ion channel 1, ...
著者Liu, Y, Ma, J, DesJarlais, R.L, Hagan, R, Rech, J, Lin, D, Liu, C, Miller, R, Schoellerman, J, Luo, J, Letavic, M, Grasberger, B, Maher, M.
登録日2020-06-02
公開日2020-12-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Molecular mechanism and structural basis of small-molecule modulation of the gating of acid-sensing ion channel 1.
Commun Biol, 4, 2021
4RR5
DownloadVisualize
BU of 4rr5 by Molmil
The crystal structure of Synechocystis sp. PCC 6803 Malonyl-CoA: ACP Transacylase
分子名称: ACETATE ION, Malonyl CoA-acyl carrier protein transacylase
著者Liu, Y.
登録日2014-11-06
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.427 Å)
主引用文献Structural and biochemical characterization of MCAT from photosynthetic microorganism Synechocystis sp. PCC 6803 reveal its stepwise catalytic mechanism
Biochem.Biophys.Res.Commun., 457, 2015
6JPI
DownloadVisualize
BU of 6jpi by Molmil
Crystal structure of PA4674 in complex with its operator DNA (28bp) from Pseudomonas aeruginosa
分子名称: DNA (28-MER), HTH cro/C1-type domain-containing protein
著者Liu, Y, Gao, Z, Zhang, H, Dong, Y.
登録日2019-03-27
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.143 Å)
主引用文献Crystal structure of PA4674 in complex with its operator DNA (28bp) from Pseudomonas aeruginosa
To Be Published
8AHL
DownloadVisualize
BU of 8ahl by Molmil
Cryo-EM structure of crescentin filaments (stutter mutant, C1 symmetry and large box)
分子名称: Crescentin, Crescentin-specific megabody MB13
著者Liu, Y, Lowe, J.
登録日2022-07-22
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon