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PDB: 455 results
5FIV
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BU of 5fiv by Molmil
STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITH AN EFFICIENT INHIBITOR OF FIV PR
Descriptor: RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Li, M, Lee, T, Morris, G, Laco, G, Wong, C, Olson, A, Elder, J, Wlodawer, A, Gustchina, A.
Deposit date:1998-12-02
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease
Proteins, 38, 2000
5X0Y
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BU of 5x0y by Molmil
Complex of Snf2-Nucleosome complex with Snf2 bound to SHL2 of the nucleosome
Descriptor: DNA (167-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Li, M, Liu, X, Xia, X, Chen, Z, Li, X.
Deposit date:2017-01-23
Release date:2017-04-19
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.69 Å)
Cite:Mechanism of chromatin remodelling revealed by the Snf2-nucleosome structure.
Nature, 544, 2017
6DWH
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BU of 6dwh by Molmil
Crystal structure of complex of BBKI and Bovine Trypsin
Descriptor: CHLORIDE ION, Cationic trypsin, Kunitz-type inihibitor, ...
Authors:Li, M, Wlodawer, A.
Deposit date:2018-06-26
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the complex of a kallikrein inhibitor from Bauhinia bauhinioides with trypsin and modeling of kallikrein complexes.
Acta Crystallogr D Struct Biol, 75, 2019
6DWF
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BU of 6dwf by Molmil
Crystal structure of complex of BBKI mutant, L55R with Bovine Trypsin
Descriptor: Cationic trypsin, Kunitz-type inihibitor
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2018-06-26
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structures of the complex of a kallikrein inhibitor from Bauhinia bauhinioides with trypsin and modeling of kallikrein complexes.
Acta Crystallogr D Struct Biol, 75, 2019
1MXL
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BU of 1mxl by Molmil
STRUCTURE OF CARDIAC TROPONIN C-TROPONIN I COMPLEX
Descriptor: CALCIUM ION, PROTEIN (TROPONIN C), PROTEIN (TROPONIN I)
Authors:Li, M.X, Spyracopoulos, L, Sykes, B.D.
Deposit date:1999-04-22
Release date:1999-07-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Binding of cardiac troponin-I147-163 induces a structural opening in human cardiac troponin-C.
Biochemistry, 38, 1999
5TJB
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BU of 5tjb by Molmil
I-II linker of TRPML1 channel at pH 4.5
Descriptor: Mucolipin-1
Authors:Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
Deposit date:2016-10-04
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
5X4J
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BU of 5x4j by Molmil
The crystal structure of Pyrococcus furiosus RecJ (Zn-soaking)
Descriptor: CHLORIDE ION, Uncharacterized protein, ZINC ION
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
5X4K
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BU of 5x4k by Molmil
The complex crystal structure of Pyrococcus furiosus RecJ and CMP
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Uncharacterized protein, ZINC ION
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
5X4H
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BU of 5x4h by Molmil
The crystal structure of Pyrococcus furiosus RecJ (wild-type)
Descriptor: MAGNESIUM ION, Uncharacterized protein
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
5X4I
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BU of 5x4i by Molmil
Pyrococcus furiosus RecJ (D83A, Mn-soaking)
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Uncharacterized protein
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
6LI3
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BU of 6li3 by Molmil
cryo-EM structure of GPR52-miniGs-NB35
Descriptor: G-protein coupled receptor 52, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, M, Wang, N, Xu, F, Wu, J, Lei, M.
Deposit date:2019-12-10
Release date:2020-02-26
Last modified:2020-03-18
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural basis of ligand recognition and self-activation of orphan GPR52.
Nature, 579, 2020
8HJL
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BU of 8hjl by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M3E
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(3S,8S,9R,10S,11S,13R,14S,17S)-17-[(2S,5R)-5-[(2S,3R,4S,5R,6S)-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-6-oxidanyl-heptan-2-yl]-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
8HJH
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BU of 8hjh by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with SIA, state 3
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, (2S,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2S,3S,4S,5R,6S)-5-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-6-[(3R,6S)-6-[(3S,8S,9R,10R,11S,13R,14S,17R)-3-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-oxidanyl-heptan-3-yl]oxy-3,4-bis(oxidanyl)oxan-2-yl]methoxy]oxane-3,4,5-triol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
8W34
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BU of 8w34 by Molmil
HIV-1 intasome core assembled with wild-type integrase, 1F
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (5'-D(*AP*CP*TP*GP*CP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*CP*CP*AP*C)-3'), DNA (5'-D(P*GP*TP*GP*GP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*GP*CP*A)-3'), ...
Authors:Li, M, Craigie, R.
Deposit date:2024-02-21
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:HIV-1 Integrase Assembles Multiple Species of Stable Synaptic Complex Intasomes That Are Active for Concerted DNA Integration In vitro.
J.Mol.Biol., 436, 2024
8W2R
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BU of 8w2r by Molmil
HIV-1 P5-IN intasome core
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (5'-D(*AP*CP*TP*GP*CP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*CP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*GP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*GP*CP*A)-3'), ...
Authors:Li, M, Craigie, R.
Deposit date:2024-02-21
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:HIV-1 Integrase Assembles Multiple Species of Stable Synaptic Complex Intasomes That Are Active for Concerted DNA Integration In vitro.
J.Mol.Biol., 436, 2024
8W09
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BU of 8w09 by Molmil
HIV-1 wild-type intasome core
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, Integrase, MAGNESIUM ION, ...
Authors:Li, M, Craigie, R.
Deposit date:2024-02-13
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:HIV-1 Integrase Assembles Multiple Species of Stable Synaptic Complex Intasomes That Are Active for Concerted DNA Integration In vitro.
J.Mol.Biol., 436, 2024
8HJF
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BU of 8hjf by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M5, state 2
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, (2S,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6R)-6-[[(3S,8S,9R,10R,11R,13R,14S,17R)-17-[(2S,5R)-5-[(2S,3R,4S,5S,6R)-3-[(2R,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-6-[[(2R,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-6-oxidanyl-heptan-2-yl]-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-3,4,5-tris(oxidanyl)oxan-2-yl]methoxy]oxane-3,4,5-triol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogropides
To Be Published
8HJP
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BU of 8hjp by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UDP state 1
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, URIDINE-5'-DIPHOSPHATE, glycosyltranseferease
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
8HJQ
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BU of 8hjq by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in apo state
Descriptor: glycosyltranseferease
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
8HJG
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BU of 8hjg by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M5, state 1
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, (2S,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3S,4S,5R,6R)-6-[[(3S,8S,9R,10R,11R,13R,14S,17R)-17-[(2S,5R)-5-[(2S,3R,4S,5S,6R)-3-[(2R,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-6-[[(2R,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-6-oxidanyl-heptan-2-yl]-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-3,4,5-tris(oxidanyl)oxan-2-yl]methoxy]oxane-3,4,5-triol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
8HJK
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BU of 8hjk by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with SIA, state 1
Descriptor: (2S,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2S,3S,4S,5R,6S)-5-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-6-[(3R,6S)-6-[(3S,8S,9R,10R,11S,13R,14S,17R)-3-[(2S,3R,4S,5S,6S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-oxidanyl-heptan-3-yl]oxy-3,4-bis(oxidanyl)oxan-2-yl]methoxy]oxane-3,4,5-triol, URIDINE-5'-DIPHOSPHATE, glycosyltranseferease
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.833 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
8HJN
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BU of 8hjn by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UPG
Descriptor: URIDINE-5'-DIPHOSPHATE-GLUCOSE, glycosyltransferase
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
8HJO
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BU of 8hjo by Molmil
Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UDP state 2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, URIDINE-5'-DIPHOSPHATE, ...
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural insights into the catalytic selectivity of SgUGT94-289-3 towards mogrosides
To Be Published
1GGP
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BU of 1ggp by Molmil
CRYSTAL STRUCTURE OF TRICHOSANTHES KIRILOWII LECTIN-1 AND ITS RELATION TO THE TYPE 2 RIBOSOME INACTIVATING PROTEINS
Descriptor: PROTEIN (LECTIN 1 A CHAIN), PROTEIN (LECTIN 1 B CHAIN)
Authors:Li, M, Chai, J.J, Wang, Y.P, Wang, K.Y, Bi, R.C.
Deposit date:2000-09-07
Release date:2003-03-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Trichosanthes Kirilowii Lectin-1 and its Relation to the Type 2 Ribosome Inactivating Proteins
PROTEIN PEPT.LETT., 8, 2003
6FIV
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BU of 6fiv by Molmil
STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITH AN EFFICIENT INHIBITOR OF FIV PR
Descriptor: RETROPEPSIN, SULFATE ION, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Li, M, Lee, T, Morris, G, Laco, G, Wong, C, Olson, A, Elder, J, Wlodawer, A, Gustchina, A.
Deposit date:1998-12-02
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease
Proteins, 38, 2000

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