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PDB: 1777 results

1S4K
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Putative cytoplasmic protein from Salmonella typhimurium
Descriptor: putative cytoplasmic protein ydil
Authors:Cuff, M.E, Li, H, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-01-16
Release date:2004-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Putative cytoplasmic protein from Salmonella typhimurium
To be Published
2CO0
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WDR5 and unmodified Histone H3 complex at 2.25 Angstrom
Descriptor: HISTONE H3 DIMETHYL-LYSINE 4, WD-REPEAT PROTEIN 5
Authors:Ruthenburg, A.J, Wang, W, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
Deposit date:2006-05-25
Release date:2006-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex
Nat.Struct.Mol.Biol., 13, 2006
5Z94
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BU of 5z94 by Molmil
Crystal Structure of SIRT3 in complex with H3K4bhb peptide
Descriptor: CITRIC ACID, GLYCEROL, Gene for histone H3 (germline gene), ...
Authors:Zhang, X, Li, H.
Deposit date:2018-02-02
Release date:2019-02-06
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Crystal Structure of SIRT3 in complex with H3K4bhb peptide
To Be Published
5ZID
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Crystal Structure of human DPP-IV in complex with HL2
Descriptor: (2S,3R)-2-amino-9-methoxy-3-(2,4,5-trifluorophenyl)-2,3-dihydro-1H-naphtho[2,1-b]pyran-8-carbonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase 4, ...
Authors:Zhu, L, Li, H, Wu, F.
Deposit date:2018-03-14
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of human DPP-IV in complex with HL2
To Be Published
2H6Q
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Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex
Descriptor: Histone H3 K4-Me3 9-residue peptide, WD-repeat protein 5
Authors:Ruthenburg, A.J, Wang, W.-K, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
Deposit date:2006-06-01
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
2H6K
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Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex
Descriptor: Histone H3 K4-Me 9-residue peptide, WD-repeat protein 5
Authors:Ruthenburg, A.J, Wang, W.-K, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
Deposit date:2006-05-31
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
4ORD
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BU of 4ord by Molmil
Crystal Structure of Zebra Fish Thioesterase Superfamily Member 2
Descriptor: Thioesterase Superfamily Member 2
Authors:Yu, S.S, Li, H, Gao, F, Xu, H, Gong, W.M.
Deposit date:2014-02-11
Release date:2015-02-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Potential Physiological Role of Zebra Fish Thioesterase Superfamily Member 2 (fTHEM2)
To be Published
7UQK
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Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7
Authors:Wang, F, Feng, X, Li, H.
Deposit date:2022-04-19
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
7UQJ
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Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ATPgS and histone H3 tail in state II
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7, Histone H3, ...
Authors:Wang, F, Feng, X, Li, H.
Deposit date:2022-04-19
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
3NKZ
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The crystal structure of a flagella protein from Yersinia enterocolitica subsp. enterocolitica 8081
Descriptor: Flagellar protein fliT, SULFATE ION, TETRAETHYLENE GLYCOL
Authors:Tan, K, Li, H, Feldmann, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-06-21
Release date:2010-08-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:The crystal structure of a flagella protein from Yersinia enterocolitica subsp. enterocolitica 8081
To be Published
6CHG
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BU of 6chg by Molmil
Crystal structure of the yeast COMPASS catalytic module
Descriptor: H3, Histone-lysine N-methyltransferase, H3 lysine-4 specific, ...
Authors:Hsu, P.L, Li, H, Zheng, N.
Deposit date:2018-02-22
Release date:2018-08-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.985 Å)
Cite:Crystal Structure of the COMPASS H3K4 Methyltransferase Catalytic Module.
Cell, 174, 2018
7XLT
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BU of 7xlt by Molmil
Cryo-EM Structure of R-loop monoclonal antibody S9.6 in recognizing RNA:DNA hybrids
Descriptor: DNA, RNA, S9.6 Fab HC, ...
Authors:Li, Q, Lin, C, Luo, Z, Li, H, Li, X, Sun, Q.
Deposit date:2022-04-22
Release date:2022-05-25
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM structure of R-loop monoclonal antibody S9.6 in recognizing RNA:DNA hybrids.
J Genet Genomics, 49, 2022
7E74
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BU of 7e74 by Molmil
Crystal structure of ENL YEATS domain T3 mutant in complex with histone H3 acetylation at K27
Descriptor: ALA-ALA-ARG-ALY, Protein ENL
Authors:Li, Y, Li, H.
Deposit date:2021-02-25
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Hotspot mutations in the structured ENL YEATS domain link aberrant transcriptional condensates and cancer.
Mol.Cell, 82, 2022
1NT2
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BU of 1nt2 by Molmil
CRYSTAL STRUCTURE OF FIBRILLARIN/NOP5P COMPLEX
Descriptor: Fibrillarin-like pre-rRNA processing protein, S-ADENOSYLMETHIONINE, conserved hypothetical protein
Authors:Aittaleb, M, Rashid, R, Chen, Q, Palmer, J.R, Daniels, C.J, Li, H.
Deposit date:2003-01-28
Release date:2003-04-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and function of archaeal box C/D sRNP core proteins.
Nat.Struct.Biol., 10, 2003
3PN8
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BU of 3pn8 by Molmil
The crystal structure of 6-phospho-beta-glucosidase from Streptococcus mutans UA159
Descriptor: DI(HYDROXYETHYL)ETHER, FORMIC ACID, Putative phospho-beta-glucosidase, ...
Authors:Tan, K, Li, H, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-11-18
Release date:2010-12-15
Last modified:2012-08-08
Method:X-RAY DIFFRACTION (1.693 Å)
Cite:The crystal structure of 6-phospho-beta-glucosidase from Streptococcus mutants UA159
To be Published
4G3R
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BU of 4g3r by Molmil
Crystal Structure of Nitrosyl Cytochrome P450cam
Descriptor: CAMPHOR, Camphor 5-monooxygenase, NITRIC OXIDE, ...
Authors:Madrona, Y, Tripathi, S.M, Li, H, Poulos, T.L.
Deposit date:2012-07-15
Release date:2012-08-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of substrate-free and nitrosyl cytochrome p450cin: implications for o(2) activation.
Biochemistry, 51, 2012
1RLG
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Molecular basis of Box C/D RNA-protein interaction: co-crystal structure of the Archaeal sRNP intiation complex
Descriptor: 25-MER, 50S ribosomal protein L7Ae
Authors:Moore, T, Zhang, Y, Fenley, M.O, Li, H.
Deposit date:2003-11-25
Release date:2004-06-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Basis of Box C/D RNA-Protein Interactions; Cocrystal Structure of Archaeal L7Ae and a Box C/D RNA.
STRUCTURE, 12, 2004
3Q6G
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BU of 3q6g by Molmil
Crystal structure of Fab of rhesus mAb 2.5B specific for quaternary neutralizing epitope of HIV-1 gp120
Descriptor: Heavy chain of Fab of rhesus mAb 2.5B, Light chain of Fab of rhesus mAb 2.5B
Authors:Spurrier, B, Sampson, J, Totrov, M, Li, H, O'Neal, T, William, C, Robinson, J, Gorny, M.K, Zolla-Pazner, S, Kong, X.P.
Deposit date:2010-12-31
Release date:2011-05-25
Last modified:2013-03-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structural Analysis of Human and Macaque mAbs 2909 and 2.5B: Implications for the Configuration of the Quaternary Neutralizing Epitope of HIV-1 gp120.
Structure, 19, 2011
2H6N
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BU of 2h6n by Molmil
Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex
Descriptor: Histone H3 K4-Me2 9-residue peptide, WD-repeat protein 5
Authors:Ruthenburg, A.J, Wang, W.-K, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
Deposit date:2006-05-31
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
2FCK
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BU of 2fck by Molmil
Structure of a putative ribosomal-protein-serine acetyltransferase from Vibrio cholerae.
Descriptor: GLYCEROL, NITRATE ION, ribosomal-protein-serine acetyltransferase, ...
Authors:Cuff, M.E, Li, H, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-12
Release date:2006-02-28
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of an acetyltransferase protein from Vibrio cholerae strain N16961.
Proteins, 69, 2007
2GS8
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BU of 2gs8 by Molmil
Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, mevalonate pyrophosphate decarboxylase
Authors:Cuff, M.E, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-04-25
Release date:2006-06-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes
To be Published
4GED
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BU of 4ged by Molmil
Crystal Structure of the Leishmania Major Peroxidase-Cytochrome C Complex
Descriptor: Ascorbate peroxidase, Cytochrome c, HEME C, ...
Authors:Jasion, V.S, Doukov, T, Pineda, S.H, Li, H, Poulos, T.L.
Deposit date:2012-08-01
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of the Leishmania major peroxidase-cytochrome c complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
4M0M
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BU of 4m0m by Molmil
The crystal structure of a functionally unknown protein lpg2422 from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Descriptor: PHOSPHATE ION, Putative uncharacterized protein, TETRAETHYLENE GLYCOL
Authors:Tan, K, Li, H, Clancy, S, Shuman, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-08-01
Release date:2013-08-21
Method:X-RAY DIFFRACTION (2.192 Å)
Cite:The crystal structure of a functionally unknown protein lpg2422 from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
To be Published
2JTQ
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Rhodanese from E.coli
Descriptor: Phage shock protein E
Authors:Jin, C, Li, H.
Deposit date:2007-08-06
Release date:2008-06-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures and backbone dynamics of Escherichia coli rhodanese PspE in its sulfur-free and persulfide-intermediate forms: implications for the catalytic mechanism of rhodanese.
Biochemistry, 47, 2008
3NSE
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BU of 3nse by Molmil
BOVINE ENOS, H4B-FREE, SEITU COMPLEX
Descriptor: ACETATE ION, ARGININE, CACODYLATE ION, ...
Authors:Raman, C.S, Li, H, Martasek, P, Kral, V, Masters, B.S.S, Poulos, T.L.
Deposit date:1998-09-23
Release date:1999-05-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of constitutive endothelial nitric oxide synthase: a paradigm for pterin function involving a novel metal center.
Cell(Cambridge,Mass.), 95, 1998

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