Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 132 results

7FIX
DownloadVisualize
BU of 7fix by Molmil
Cryo-EM structure of cyanobacterial photosystem I in the presence of ferredoxin and cytochrome c6
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, CALCIUM ION, ...
Authors:Li, J, Kurisu, G.
Deposit date:2021-08-01
Release date:2022-09-21
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (1.97 Å)
Cite:Structure of cyanobacterial photosystem I complexed with ferredoxin at 1.97 angstrom resolution.
Commun Biol, 5, 2022
8H2U
DownloadVisualize
BU of 8h2u by Molmil
X-ray Structure of photosystem I-LHCI super complex from Chlamydomonas reinhardtii.
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Tanaka, H, Kubota-Kawai, H, Misumi, Y, Kurisu, G.
Deposit date:2022-10-07
Release date:2023-06-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Three structures of PSI-LHCI from Chlamydomonas reinhardtii suggest a resting state re-activated by ferredoxin.
Biochim Biophys Acta Bioenerg, 1864, 2023
8HN3
DownloadVisualize
BU of 8hn3 by Molmil
Soluble domain of cytochrome c-556 from Chlorobaculum tepidum
Descriptor: ACETATE ION, Cytochrome c-556, GLYCEROL, ...
Authors:Kishimoto, H, Azai, C, Yamamoto, T, Mutoh, R, Nakaniwa, T, Tanaka, H, Kurisu, G, Oh-oka, H.
Deposit date:2022-12-07
Release date:2023-07-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Soluble domains of cytochrome c-556 and Rieske iron-sulfur protein from Chlorobaculum tepidum: Crystal structures and interaction analysis.
Curr Res Struct Biol, 5, 2023
8HN2
DownloadVisualize
BU of 8hn2 by Molmil
Selenomethionine-labelled soluble domain of Rieske iron-sulfur protein from chlorobaculum tepidum
Descriptor: Cytochrome b6-f complex iron-sulfur subunit, FE2/S2 (INORGANIC) CLUSTER
Authors:Kishimoto, H, Mutoh, R, Tanaka, H, Kurisu, G, Oh-oka, H.
Deposit date:2022-12-07
Release date:2023-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Soluble domains of cytochrome c-556 and Rieske iron-sulfur protein from Chlorobaculum tepidum: Crystal structures and interaction analysis.
Curr Res Struct Biol, 5, 2023
8I3J
DownloadVisualize
BU of 8i3j by Molmil
Crystal structure of human inner-arm dynein heavy chain d stalk and microtubule binding domain
Descriptor: Dynein axonemal heavy chain 1
Authors:Ko, S, Yu, J, Toda, A, Tanaka, H, Kurisu, G.
Deposit date:2023-01-17
Release date:2023-08-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structure of the stalk region of axonemal inner-arm dynein-d reveals unique features in the coiled-coil and microtubule-binding domain.
Febs Lett., 597, 2023
1GEE
DownloadVisualize
BU of 1gee by Molmil
Crystal structure of glucose dehydrogenase mutant Q252L complexed with NAD+
Descriptor: GLUCOSE 1-DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamamoto, K, Kurisu, G, Kusunoki, M, Tabata, S, Urabe, I, Osaki, S.
Deposit date:2000-11-07
Release date:2003-08-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of stability-increasing mutants of glucose dehydrogenase
To be Published
1G6K
DownloadVisualize
BU of 1g6k by Molmil
Crystal structure of glucose dehydrogenase mutant E96A complexed with NAD+
Descriptor: GLUCOSE 1-DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamamoto, K, Kurisu, G, Kusunoki, M, Tabata, S, Urabe, I, Osaki, S.
Deposit date:2000-11-06
Release date:2003-08-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of stability-increasing mutants of glucose dehydrogenase
To be Published
1VCL
DownloadVisualize
BU of 1vcl by Molmil
Crystal Structure of Hemolytic Lectin CEL-III
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Uchida, T, Yamasaki, T, Eto, S, Sugawara, H, Kurisu, G, Nakagawa, A, Kusunoki, M, Hatakeyama, T.
Deposit date:2004-03-09
Release date:2004-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Hemolytic Lectin CEL-III Isolated from the Marine Invertebrate Cucumaria echinata: IMPLICATIONS OF DOMAIN STRUCTURE FOR ITS MEMBRANE PORE-FORMATION MECHANISM
J.Biol.Chem., 279, 2004
1IUE
DownloadVisualize
BU of 1iue by Molmil
Crystal Structure Analysis of ferredoxin from Plasmodium falciparum
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN, SODIUM ION
Authors:Kimata-Ariga, Y, Kurisu, G, Hase, T.
Deposit date:2002-03-04
Release date:2003-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Redox power generator of a nonphotosynthetic plastid in malaria parasite
To be Published
1J18
DownloadVisualize
BU of 1j18 by Molmil
Crystal Structure of a Beta-Amylase from Bacillus cereus var. mycoides Cocrystallized with Maltose
Descriptor: ACETIC ACID, Beta-amylase, CALCIUM ION, ...
Authors:Miyake, H, Kurisu, G, Kusunoki, M, Nishimura, S, Kitamura, S, Nitta, Y.
Deposit date:2002-12-02
Release date:2003-05-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a Catalytic Site Mutant of beta-Amylase from Bacillus cereus var. mycoides Cocrystallized with Maltopentaose
BIOCHEMISTRY, 42, 2003
1ITC
DownloadVisualize
BU of 1itc by Molmil
Beta-Amylase from Bacillus cereus var. mycoides Complexed with Maltopentaose
Descriptor: ACETIC ACID, Beta-Amylase, CALCIUM ION, ...
Authors:Miyake, H, Kurisu, G, Kusunoki, M, Nishimura, S, Kitamura, S, Nitta, Y.
Deposit date:2002-01-17
Release date:2003-05-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Catalytic Site Mutant of beta-Amylase from Bacillus cereus var. mycoides Cocrystallized with Maltopentaose
BIOCHEMISTRY, 42, 2003
5E37
DownloadVisualize
BU of 5e37 by Molmil
Redox protein from Chlamydomonas reinhardtii
Descriptor: CALCIUM ION, EF-Hand domain-containing thioredoxin
Authors:Charoenwattansatien, R, Hochmal, A.K, Zinzius, K, Muto, R, Tanaka, H, Hippler, M, Kurisu, G.
Deposit date:2015-10-02
Release date:2016-06-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Calredoxin represents a novel type of calcium-dependent sensor-responder connected to redox regulation in the chloroplast
Nat Commun, 7, 2016
7CKA
DownloadVisualize
BU of 7cka by Molmil
The structure of Glycine max (Soybean) Heme oxygenase 1
Descriptor: CITRIC ACID, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Tohda, R, Tanaka, H, Kurisu, G.
Deposit date:2020-07-16
Release date:2020-12-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Crystal structure of higher plant heme oxygenase-1 and its mechanism of interaction with ferredoxin.
J.Biol.Chem., 296, 2020
5YGQ
DownloadVisualize
BU of 5ygq by Molmil
Crystal Structure of Ferredoxin NADP+ Oxidoreductase from Rhodopseudomonas palustris
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
Authors:Muraki, N, Seo, D, Kurisu, G.
Deposit date:2017-09-25
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Kinetic and structural insight into a role of the re-face Tyr328 residue of the homodimer type ferredoxin-NADP+oxidoreductase from Rhodopseudomonas palustris in the reaction with NADP+/NADPH.
Biochim Biophys Acta Bioenerg, 2019
5YXM
DownloadVisualize
BU of 5yxm by Molmil
Crystal structure of Chlamydomonas Outer Arm Dynein Light Chain 1
Descriptor: Dynein light chain 1, axonemal, PHOSPHATE ION
Authors:Toda, A, Tanaka, H, Nishikawa, Y, Yagi, T, Kurisu, G.
Deposit date:2017-12-06
Release date:2018-03-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.545 Å)
Cite:Structural atlas of dynein motors at atomic resolution.
Biophys Rev, 10, 2018
3VKH
DownloadVisualize
BU of 3vkh by Molmil
X-ray structure of a functional full-length dynein motor domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Dynein heavy chain, cytoplasmic
Authors:Kon, T, Oyama, T, Shimo-Kon, R, Suto, K, Kurisu, G.
Deposit date:2011-11-16
Release date:2012-03-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The 2.8 A crystal structure of the dynein motor domain
Nature, 484, 2012
6AA2
DownloadVisualize
BU of 6aa2 by Molmil
X-ray structure of ReQy1 (oxidized form)
Descriptor: Green fluorescent protein
Authors:Sugiura, K, Yasuda, A, Tabushi, N, Tanaka, H, Kurisu, G, Hisabori, T.
Deposit date:2018-07-17
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multicolor redox sensor proteins can visualize redox changes in various compartments of the living cell.
Biochim Biophys Acta Gen Subj, 1863, 2019
6A7K
DownloadVisualize
BU of 6a7k by Molmil
X-ray structure of NdhS from T. elongatus
Descriptor: ACETIC ACID, Tlr0636 protein
Authors:Umeno, K, Misumi, Y, Tanaka, H, Kurisu, G.
Deposit date:2018-07-03
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural adaptations of photosynthetic complex I enable ferredoxin-dependent electron transfer.
Science, 363, 2019
8WIY
DownloadVisualize
BU of 8wiy by Molmil
cryo-EM structure of alligator haemoglobin in oxy form
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, OXYGEN MOLECULE, ...
Authors:Takahashi, K, Lee, Y, Fago, A, Bautista, N.M, Kawamoto, A, Kurisu, G, Storz, J, Nishizawa, T, Tame, J.R.H.
Deposit date:2023-09-25
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM.
Nat Commun, 15, 2024
8WIZ
DownloadVisualize
BU of 8wiz by Molmil
cryo-EM structure of alligator haemoglobin in deoxy form
Descriptor: BICARBONATE ION, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Takahashi, K, Lee, Y, Fago, A, Bautista, N.M, Kawamoto, A, Kurisu, G, Storz, J, Nishizawa, T, Tame, J.R.H.
Deposit date:2023-09-25
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM.
Nat Commun, 15, 2024
8WJ0
DownloadVisualize
BU of 8wj0 by Molmil
cryo-EM structure of human haemoglobin in carbonmonoxy form
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Takahashi, K, Lee, Y, Fago, A, Bautista, N.M, Kawamoto, A, Kurisu, G, Storz, J, Nishizawa, T, Tame, J.R.H.
Deposit date:2023-09-25
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM.
Nat Commun, 15, 2024
8WJ1
DownloadVisualize
BU of 8wj1 by Molmil
cryo-EM structure of human haemoglobin in oxy form
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, OXYGEN MOLECULE, ...
Authors:Takahashi, K, Lee, Y, Fago, A, Bautista, N.M, Kawamoto, A, Kurisu, G, Storz, J, Nishizawa, T, Tame, J.R.H.
Deposit date:2023-09-25
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.27 Å)
Cite:The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM.
Nat Commun, 15, 2024
8WIX
DownloadVisualize
BU of 8wix by Molmil
cryo-EM structure of alligator haemoglobin in carbonmonoxy form
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Takahashi, K, Lee, Y, Fago, A, Bautista, N.M, Kawamoto, A, Kurisu, G, Storz, J, Nishizawa, T, Tame, J.R.H.
Deposit date:2023-09-25
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM.
Nat Commun, 15, 2024
8WJ2
DownloadVisualize
BU of 8wj2 by Molmil
cryo-EM structure of human haemoglobin in deoxy form
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Takahashi, K, Lee, Y, Fago, A, Bautista, N.M, Kawamoto, A, Kurisu, G, Storz, J, Nishizawa, T, Tame, J.R.H.
Deposit date:2023-09-25
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.35 Å)
Cite:The unique allosteric property of crocodilian haemoglobin elucidated by cryo-EM.
Nat Commun, 15, 2024
5FJS
DownloadVisualize
BU of 5fjs by Molmil
Bacterial beta-glucosidase reveals the structural and functional basis of genetic defects in human glucocerebrosidase 2 (GBA2)
Descriptor: CALCIUM ION, GLUCOSYLCERAMIDASE
Authors:Charoenwattanasatien, R, Pengthaisong, S, Breen, I, Mutoha, R, Sansenya, S, Hua, Y, Tankrathok, A, Wu, L, Songsiriritthigul, C, Tanaka, H, Williams, S.J, Davies, G.J, Kurisu, G, Ketudat Cairns, J.R.
Deposit date:2015-10-12
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bacterial Beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (Gba2)
Acs Chem.Biol., 11, 2016

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon