Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 262 results

4KNY
DownloadVisualize
BU of 4kny by Molmil
Crystal structure of the response regulator KdpE complexed to DNA in an active-like conformation
Descriptor: KDP operon transcriptional regulatory protein KdpE, Promoter DNA
Authors:Kumar, S, Narayanan, A, Yernool, D.A.
Deposit date:2013-05-10
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.945 Å)
Cite:An asymmetric heterodomain interface stabilizes a response regulator-DNA complex.
Nat Commun, 5, 2014
5XOP
DownloadVisualize
BU of 5xop by Molmil
Crystal Structure of N-terminal domain EhCaBP1 EF-2 mutant
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Calcium-binding protein 1 (EhCBP1), ...
Authors:Kumar, S, Gourinath, S.
Deposit date:2017-05-30
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of calcium binding protein-1 from Entamoeba histolytica: a novel arrangement of EF hand motifs.
Proteins, 68, 2007
6KSN
DownloadVisualize
BU of 6ksn by Molmil
Structure of a Zn-bound camelid single domain antibody
Descriptor: 1,2-ETHANEDIOL, ICab3, SODIUM ION, ...
Authors:Kumar, S, Athreya, A, Penmatsa, A.
Deposit date:2019-08-24
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Isolation and structural characterization of a Zn2+-bound single-domain antibody against NorC, a putative multidrug efflux transporter in bacteria.
J.Biol.Chem., 295, 2020
8X1H
DownloadVisualize
BU of 8x1h by Molmil
Crystal structure of N-terminal domain of Nucleocapsid protein of SARS-CoV-2
Descriptor: GLYCEROL, Nucleoprotein
Authors:Kumari, S, Gupta, G.D.
Deposit date:2023-11-07
Release date:2023-11-22
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Unveiling potential inhibitors targeting the nucleocapsid protein of SARS-CoV-2: Structural insights into their binding sites.
Int.J.Biol.Macromol., 273, 2024
6A8D
DownloadVisualize
BU of 6a8d by Molmil
Crystal Structure of Chlamydomonas reinhardtii ARF
Descriptor: ARF/SAR superfamily small monomeric GTP binding protein, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kumari, S, Goel, M, Kateriya, S, Sharma, P.
Deposit date:2018-07-06
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of Chlamydomonas reinhardtii Arf
To Be Published
2FGL
DownloadVisualize
BU of 2fgl by Molmil
An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27
Descriptor: MAGNESIUM ION, alkaline thermostable endoxylanase, alpha-D-xylopyranose, ...
Authors:Ramakumar, S, Manikandan, K, Bhardwaj, A, Reddy, V.S, Lokanath, N.K, Ghosh, A.
Deposit date:2005-12-22
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of native and xylosaccharide-bound alkali thermostable xylanase from an alkalophilic Bacillus sp. NG-27: structural insights into alkalophilicity and implications for adaptation to polyextreme conditions.
Protein Sci., 15, 2006
2F8Q
DownloadVisualize
BU of 2f8q by Molmil
An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27
Descriptor: MAGNESIUM ION, alkaline thermostable endoxylanase
Authors:Ramakumar, S, Manikandan, K, Bhardwaj, A, Ghosh, A, Reddy, V.S.
Deposit date:2005-12-03
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of native and xylosaccharide-bound alkali thermostable xylanase from an alkalophilic Bacillus sp. NG-27: structural insights into alkalophilicity and implications for adaptation to polyextreme conditions.
Protein Sci., 15, 2006
6JP9
DownloadVisualize
BU of 6jp9 by Molmil
Crsytal structure of a XMP complexed ATPPase subunit of M. jannaschii GMP synthetase
Descriptor: GMP synthase [glutamine-hydrolyzing] subunit B, MALONIC ACID, TRIETHYLENE GLYCOL, ...
Authors:Shivakumarasamy, S, Balaram, H.
Deposit date:2019-03-26
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanistic Insights into the Functioning of a Two-Subunit GMP Synthetase, an Allosterically Regulated, Ammonia Channeling Enzyme.
Biochemistry, 61, 2022
6A88
DownloadVisualize
BU of 6a88 by Molmil
Crystal Structure of T. gondii prolyl tRNA synthetase with Febrifugine and ATP Analog
Descriptor: 3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Kumari, S, Mishra, S, Yogavel, M, Sharma, A.
Deposit date:2018-07-06
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Conformational heterogeneity in apo and drug-bound structures of Toxoplasma gondii prolyl-tRNA synthetase.
Acta Crystallogr.,Sect.F, 75, 2019
5XLU
DownloadVisualize
BU of 5xlu by Molmil
High Resolution Crystal Structure of Bacillus Licheniformis Gamma Glutamyl Transpeptidase with Acivicin
Descriptor: (2S)-AMINO[(5S)-3-CHLORO-4,5-DIHYDROISOXAZOL-5-YL]ACETIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Kumari, S, Goel, M, Gupta, R, Pal, R.
Deposit date:2017-05-11
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High Resolution Crystal Structure of Bacillus Licheniformis Gamma Glutamyl Transpeptidase with Acivicin
To Be Published
5Y8X
DownloadVisualize
BU of 5y8x by Molmil
Crystal structure of Bacillus licheniformis Gamma glutamyl transpeptidase with Azaserine
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Kumari, S, Goel, M, Pal, R, Gupta, R.
Deposit date:2017-08-21
Release date:2018-10-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of Bacillus licheniformis Gamma glutamyl transpeptidase with Azaserine
To Be Published
5ZDI
DownloadVisualize
BU of 5zdi by Molmil
Crystal structure of CsaA chaperone protein from picrophilus torridus
Descriptor: GLYCEROL, Protein secretion chaperonin CsaA
Authors:Kumari, S, Sharma, A, Goel, M.
Deposit date:2018-02-23
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of CsaA chaperone protein from picrophilus torridus
To Be Published
1UBQ
DownloadVisualize
BU of 1ubq by Molmil
STRUCTURE OF UBIQUITIN REFINED AT 1.8 ANGSTROMS RESOLUTION
Descriptor: UBIQUITIN
Authors:Vijay-Kumar, S, Bugg, C.E, Cook, W.J.
Deposit date:1987-01-02
Release date:1987-04-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of ubiquitin refined at 1.8 A resolution.
J.Mol.Biol., 194, 1987
8I7E
DownloadVisualize
BU of 8i7e by Molmil
Crystal structure of Glyceraldehyde 3-phosphate dehydrogenase from Salmonella typhi at 2.05A
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase
Authors:Kumar, N, Dilawari, R, Chaubey, G.K, Modanwal, R, Talukdar, S, Dhiman, A, Chaudhary, S, Patidar, A, Kumar, A, Raje, C.I, Raje, M, Kumaran, S.
Deposit date:2023-01-31
Release date:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of Glyceraldehyde 3-phosphate dehydrogenase from Salmonella typhi at 2.05A
To Be Published
6LCN
DownloadVisualize
BU of 6lcn by Molmil
Crystal structure of Serine Acetyltransferase from Planctomyces limnophilus at 2.15A
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Kumar, N, Singh, R.P, Singh, A.K, Kumaran, S.
Deposit date:2019-11-19
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Understanding Mechanics of competitive-allostery Using Engineered Cysteine Synthase Assembly
To Be Published
8PQ4
DownloadVisualize
BU of 8pq4 by Molmil
Structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69)
Descriptor: 1,2-ETHANEDIOL, Transcriptional regulator HosA
Authors:Arpita, G, Kavyashree, M, Kannika, B.R, Madan Kumar, S.
Deposit date:2023-07-10
Release date:2023-07-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69)
To Be Published
7D40
DownloadVisualize
BU of 7d40 by Molmil
Crystal structure of GATase subunit of Methanocaldococcus jannaschii GMP synthetase
Descriptor: GMP synthase [glutamine-hydrolyzing] subunit A
Authors:Bellur, A, Dongre, A, Kumar, S, Balaram, H.
Deposit date:2020-09-21
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for the hyperthermostability of an archaeal enzyme induced by succinimide formation.
Biophys.J., 120, 2021
7D95
DownloadVisualize
BU of 7d95 by Molmil
Crystal structure of acivicin-bound GATase subunit of Methanocaldococcus jannaschii GMP synthetase
Descriptor: GMP synthase [glutamine-hydrolyzing] subunit A
Authors:Bellur, A, Dongre, A, Kumar, S, Balaram, H.
Deposit date:2020-10-12
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for the hyperthermostability of an archaeal enzyme induced by succinimide formation.
Biophys.J., 120, 2021
7X7N
DownloadVisualize
BU of 7x7n by Molmil
3D model of the 3-RBD up single trimeric spike protein of SARS-CoV2 in the presence of synthetic peptide SIH-5.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, Synthetic peptide SIH-5
Authors:Khatri, B, Pramanick, I, Malladi, S.K, Rajmani, R.S, Kumar, S, Ghosh, P, Sengupta, N, Rahisuddin, R, Kumaran, S, Ringe, R.P, Varadarajan, R, Dutta, S, Chatterjee, J.
Deposit date:2022-03-10
Release date:2022-04-27
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (4.47 Å)
Cite:A dimeric proteomimetic prevents SARS-CoV-2 infection by dimerizing the spike protein.
Nat.Chem.Biol., 18, 2022
4LQ6
DownloadVisualize
BU of 4lq6 by Molmil
Crystal structure of Rv3717 reveals a novel amidase from M. tuberculosis
Descriptor: CHLORIDE ION, N-acetymuramyl-L-alanine amidase-related protein, PLATINUM (II) ION, ...
Authors:Kumar, A, Kumar, S, Kumar, D, Mishra, A, Dewangan, R.P, Shrivastava, P, Ramachandran, S, Taneja, B.
Deposit date:2013-07-17
Release date:2013-12-04
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The structure of Rv3717 reveals a novel amidase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 69, 2013
1BJF
DownloadVisualize
BU of 1bjf by Molmil
CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA AT 2.4 ANGSTROMS
Descriptor: CALCIUM ION, NEUROCALCIN DELTA
Authors:Vijay-Kumar, S, Kumar, V.D.
Deposit date:1998-06-25
Release date:1999-07-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of recombinant bovine neurocalcin.
Nat.Struct.Biol., 6, 1999
3OIH
DownloadVisualize
BU of 3oih by Molmil
Crystal Structure of the complex of xylanase-alpha-amylase inhibitor Protein (XAIP-I) with trehalose at 1.87 A resolution
Descriptor: ACETATE ION, Haementhin, PHOSPHATE ION, ...
Authors:Kumar, M, Kumar, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-08-19
Release date:2010-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal Structure of the complex of xylanase-alpha-amylase inhibitor Protein (XAIP-I) with trehalose at 1.87 A resolution
To be Published
3S8H
DownloadVisualize
BU of 3s8h by Molmil
Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution
Descriptor: 3-HYDROXY-PROPANOIC ACID, Dihydrodipicolinate synthase
Authors:Kumar, M, Kaur, N, Kumar, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-05-28
Release date:2011-06-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution
TO BE PUBLISHED
1HIG
DownloadVisualize
BU of 1hig by Molmil
THREE-DIMENSIONAL STRUCTURE OF RECOMBINANT HUMAN INTERFERON-GAMMA.
Descriptor: INTERFERON-GAMMA
Authors:Ealick, S.E, Cook, W.J, Vijay-Kumar, S, Carson, M, Nagabhushan, T.L, Trotta, P.P, Bugg, C.E.
Deposit date:1991-10-03
Release date:1992-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Three-dimensional structure of recombinant human interferon-gamma.
Science, 252, 1991
3BM5
DownloadVisualize
BU of 3bm5 by Molmil
Crystal structure of O-acetyl-serine sulfhydrylase from Entamoeba histolytica in complex with cysteine
Descriptor: CYSTEINE, Cysteine synthase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Krishna, C, Kumar, M, Kumar, S, Gourinath, S.
Deposit date:2007-12-12
Release date:2008-04-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of native O-acetyl-serine sulfhydrylase from Entamoeba histolytica and its complex with cysteine: structural evidence for cysteine binding and lack of interactions with serine acetyl transferase.
Proteins, 72, 2008

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon