5MTF
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![BU of 5mtf by Molmil](/molmil-images/mine/5mtf) | A modular route to novel potent and selective inhibitors of rhomboid intramembrane proteases | Descriptor: | CHLORIDE ION, Rhomboid protease GlpG, inhibitor, ... | Authors: | Ticha, A, Stanchev, S, Vinothkumar, K.R, Mikles, D.C, Pachl, P, Svehlova, K, Nguyen, M.T.N, Verhelst, S.H.L, Johnson, D, Bachovchin, D, Lepsik, M, Majer, P, Strisovsky, K. | Deposit date: | 2017-01-09 | Release date: | 2017-11-15 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.79 Å) | Cite: | General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases. Cell Chem Biol, 24, 2017
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5O31
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![BU of 5o31 by Molmil](/molmil-images/mine/5o31) | Mitochondrial complex I in the deactive state | Descriptor: | Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Blaza, J.N, Vinothkumar, K.R, Hirst, J. | Deposit date: | 2017-05-23 | Release date: | 2018-01-17 | Last modified: | 2019-10-23 | Method: | ELECTRON MICROSCOPY (4.13 Å) | Cite: | Structure of the Deactive State of Mammalian Respiratory Complex I. Structure, 26, 2018
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2IWV
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![BU of 2iwv by Molmil](/molmil-images/mine/2iwv) | Structure of the monomeric outer membrane porin OmpG in the open and closed conformation | Descriptor: | CALCIUM ION, LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE PROTEIN G, ... | Authors: | Yildiz, O, Vinothkumar, K.R, Goswami, P, Kuehlbrandt, W. | Deposit date: | 2006-07-04 | Release date: | 2006-08-14 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structure of the Monomeric Outer-Membrane Porin Ompg in the Open and Closed Conformation. Embo J., 25, 2006
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2IWW
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![BU of 2iww by Molmil](/molmil-images/mine/2iww) | Structure of the monomeric outer membrane porin OmpG in the open and closed conformation | Descriptor: | LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE PROTEIN G, beta-D-glucopyranose, ... | Authors: | Yildiz, O, Vinothkumar, K.R, Goswami, P, Kuehlbrandt, W. | Deposit date: | 2006-07-05 | Release date: | 2006-08-14 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structure of the Monomeric Outer-Membrane Porin Ompg in the Open and Closed Conformation. Embo J., 25, 2006
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8WV6
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![BU of 8wv6 by Molmil](/molmil-images/mine/8wv6) | PaaZ, bifunctional enzyme | Descriptor: | Bifunctional protein PaaZ | Authors: | Yadav, S, Vinothkumar, K.R. | Deposit date: | 2023-10-23 | Release date: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (2.3 Å) | Cite: | Factors affecting macromolecule orientations in thin films formed in cryo-EM. Acta Crystallogr D Struct Biol, 80, 2024
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8WV5
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![BU of 8wv5 by Molmil](/molmil-images/mine/8wv5) | C-reactive protein, decamer | Descriptor: | C-reactive protein(1-205), CALCIUM ION | Authors: | Yadav, S, Vinothkumar, K.R. | Deposit date: | 2023-10-23 | Release date: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Factors affecting macromolecule orientations in thin films formed in cryo-EM. Acta Crystallogr D Struct Biol, 80, 2024
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8WV4
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![BU of 8wv4 by Molmil](/molmil-images/mine/8wv4) | C-reactive protein, pentamer | Descriptor: | C-reactive protein(1-205), CALCIUM ION | Authors: | Yadav, S, Vinothkumar, K.R. | Deposit date: | 2023-10-23 | Release date: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Factors affecting macromolecule orientations in thin films formed in cryo-EM. Acta Crystallogr D Struct Biol, 80, 2024
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8WZM
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![BU of 8wzm by Molmil](/molmil-images/mine/8wzm) | |
8WZK
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![BU of 8wzk by Molmil](/molmil-images/mine/8wzk) | Human erythrocyte catalase | Descriptor: | Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Yadav, S, Vinothkumar, K.R. | Deposit date: | 2023-11-01 | Release date: | 2024-07-10 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (2.4 Å) | Cite: | Factors affecting macromolecule orientations in thin films formed in cryo-EM. Acta Crystallogr D Struct Biol, 80, 2024
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8WZJ
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![BU of 8wzj by Molmil](/molmil-images/mine/8wzj) | Human erythrocyte catalase | Descriptor: | Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Yadav, S, Vinothkumar, K.R. | Deposit date: | 2023-11-01 | Release date: | 2024-07-10 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | Factors affecting macromolecule orientations in thin films formed in cryo-EM. Acta Crystallogr D Struct Biol, 80, 2024
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8WZH
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![BU of 8wzh by Molmil](/molmil-images/mine/8wzh) | |
8WZI
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![BU of 8wzi by Molmil](/molmil-images/mine/8wzi) | One RBD up state of Spike glycoprotein, SARS-CoV-2 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Yadav, S, Vinothkumar, K.R. | Deposit date: | 2023-11-01 | Release date: | 2024-07-10 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3 Å) | Cite: | Factors affecting macromolecule orientations in thin films formed in cryo-EM. Acta Crystallogr D Struct Biol, 80, 2024
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3FI1
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![BU of 3fi1 by Molmil](/molmil-images/mine/3fi1) | NhaA dimer model | Descriptor: | Na(+)/H(+) antiporter nhaA | Authors: | Appel, M, Hizlan, D, Vinothkumar, K.R, Ziegler, C, Kuehlbrandt, W. | Deposit date: | 2008-12-10 | Release date: | 2009-01-13 | Last modified: | 2024-02-21 | Method: | ELECTRON CRYSTALLOGRAPHY (7 Å) | Cite: | Conformations of NhaA, the Na/H exchanger from Escherichia coli, in the pH-activated and ion-translocating states J.Mol.Biol., 386, 2009
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6JQN
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![BU of 6jqn by Molmil](/molmil-images/mine/6jqn) | Structure of PaaZ, a bifunctional enzyme in complex with NADP+ and OCoA | Descriptor: | Bifunctional protein PaaZ, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OCTANOYL-COENZYME A | Authors: | Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G. | Deposit date: | 2019-03-31 | Release date: | 2019-09-11 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway. Nat Commun, 10, 2019
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6JQO
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![BU of 6jqo by Molmil](/molmil-images/mine/6jqo) | Structure of PaaZ, a bifunctional enzyme in complex with NADP+ and CCoA | Descriptor: | Bifunctional protein PaaZ, CROTONYL COENZYME A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G. | Deposit date: | 2019-03-31 | Release date: | 2019-09-11 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway. Nat Commun, 10, 2019
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6JQL
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![BU of 6jql by Molmil](/molmil-images/mine/6jql) | Structure of PaaZ, a bifunctional enzyme | Descriptor: | Bifunctional protein PaaZ | Authors: | Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G. | Deposit date: | 2019-03-31 | Release date: | 2019-09-11 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway. Nat Commun, 10, 2019
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6JQM
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![BU of 6jqm by Molmil](/molmil-images/mine/6jqm) | Structure of PaaZ with NADPH | Descriptor: | Bifunctional protein PaaZ, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G. | Deposit date: | 2019-03-31 | Release date: | 2019-09-11 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway. Nat Commun, 10, 2019
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6LVE
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![BU of 6lve by Molmil](/molmil-images/mine/6lve) | Structure of Dimethylformamidase, tetramer, E521A mutant | Descriptor: | N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit | Authors: | Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R. | Deposit date: | 2020-02-02 | Release date: | 2020-06-03 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase. Angew.Chem.Int.Ed.Engl., 59, 2020
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6LVC
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![BU of 6lvc by Molmil](/molmil-images/mine/6lvc) | Structure of Dimethylformamidase, dimer | Descriptor: | FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit | Authors: | Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R. | Deposit date: | 2020-02-02 | Release date: | 2020-06-03 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3 Å) | Cite: | A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase. Angew.Chem.Int.Ed.Engl., 59, 2020
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6LVB
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![BU of 6lvb by Molmil](/molmil-images/mine/6lvb) | Structure of Dimethylformamidase, tetramer | Descriptor: | FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit | Authors: | Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R. | Deposit date: | 2020-02-02 | Release date: | 2020-06-03 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (2.8 Å) | Cite: | A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase. Angew.Chem.Int.Ed.Engl., 59, 2020
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6LVD
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![BU of 6lvd by Molmil](/molmil-images/mine/6lvd) | Structure of Dimethylformamidase, tetramer, Y440A mutant | Descriptor: | N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit | Authors: | Arya, C.A, Yadav, S, Fine, J, Casanal, A, Chopra, G, Ramanathan, G, Subramanian, R, Vinothkumar, K.R. | Deposit date: | 2020-02-02 | Release date: | 2020-06-03 | Last modified: | 2024-03-27 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase. Angew.Chem.Int.Ed.Engl., 59, 2020
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