Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 71 件
3ZOT
DownloadVisualize
BU of 3zot by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L29 (data set 2)
分子名称: CHLORIDE ION, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside, ...
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-24
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
3ZMH
DownloadVisualize
BU of 3zmh by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L62
分子名称: CHLORIDE ION, CYCLOPENTYL 2-OXO-4-PHENYLAZETIDINE-1-CARBOXYLATE, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of rhomboid protease in complex with beta-lactam inhibitors defines the S2' cavity.
Structure, 21, 2013
3ZMJ
DownloadVisualize
BU of 3zmj by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L61
分子名称: 2-methylpropyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, Pierrat, O, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
3ZEB
DownloadVisualize
BU of 3zeb by Molmil
A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150
分子名称: 2-phenylethyl 2-(4-azanyl-2-methanoyl-phenyl)ethanoate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, voskya, O, Kuettler, E.V, Brouwer, A.J, Liskamp, R.M.J, Verhelst, S.H.L.
登録日2012-12-04
公開日2013-02-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Activity-Based Probes for Rhomboid Proteases Discovered in a Mass Spectrometry-Based Assay.
Proc.Natl.Acad.Sci.USA, 110, 2013
4CKD
DownloadVisualize
BU of 4ckd by Molmil
Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4.
分子名称: BETA-GALACTOSIDASE, SCFV13R4 ANTIBODY FV HEAVY CHAIN, SCFV13R4 ANTIBODY FV LIGHT CHAIN
著者Vinothkumar, K.R, McMullan, G, Henderson, R.
登録日2014-01-03
公開日2014-01-15
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (13 Å)
主引用文献Molecular Mechanism of Antibody-Mediated Activation of Beta-Galactosidase.
Structure, 22, 2014
3ZMI
DownloadVisualize
BU of 3zmi by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L29
分子名称: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside, phenyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
7W8J
DownloadVisualize
BU of 7w8j by Molmil
Dimethylformamidase, 2x(A2B2)
分子名称: FE (III) ION, N,N-dimethylformamidase large subunit, N,N-dimethylformamidase small subunit
著者Vinothkumar, K.R, Subramanian, R, Arya, C, Ramanathan, G.
登録日2021-12-07
公開日2022-04-06
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Dimethylformamidase with a Unique Iron Center
To Be Published
5LDX
DownloadVisualize
BU of 5ldx by Molmil
Structure of mammalian respiratory Complex I, class3.
分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ...
著者Vinothkumar, K.R, Zhu, J, Hirst, J.
登録日2016-06-28
公開日2016-09-14
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Structure of mammalian respiratory complex I.
Nature, 536, 2016
5LQY
DownloadVisualize
BU of 5lqy by Molmil
Structure of F-ATPase from Pichia angusta, in state2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase OSCP subunit, ...
著者Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
登録日2016-08-17
公開日2016-11-16
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LQX
DownloadVisualize
BU of 5lqx by Molmil
Structure of F-ATPase from Pichia angusta, state3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase AAP1 subunit, ...
著者Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
登録日2016-08-17
公開日2016-11-16
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LDW
DownloadVisualize
BU of 5ldw by Molmil
Structure of mammalian respiratory Complex I, class1
分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ...
著者Vinothkumar, K.R, Zhu, J, Hirst, J.
登録日2016-06-28
公開日2016-09-07
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structure of mammalian respiratory complex I.
Nature, 536, 2016
5LC5
DownloadVisualize
BU of 5lc5 by Molmil
Structure of mammalian respiratory Complex I, class2
分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ...
著者Vinothkumar, K.R, Zhu, J, Hirst, J.
登録日2016-06-19
公開日2016-09-07
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (4.35 Å)
主引用文献Structure of mammalian respiratory complex I.
Nature, 536, 2016
5LQZ
DownloadVisualize
BU of 5lqz by Molmil
Structure of F-ATPase from Pichia angusta, state1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase OSCP subunit, ...
著者Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
登録日2016-08-17
公開日2016-11-16
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5MT6
DownloadVisualize
BU of 5mt6 by Molmil
Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-RVRHA-phenylethyl-ketoamide
分子名称: ACE-ARG-VAL-ARG-HIS-ALA-V9C, Rhomboid protease GlpG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R.
登録日2017-01-06
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
5MT8
DownloadVisualize
BU of 5mt8 by Molmil
Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-RVRHA-cmk
分子名称: ACE-ARG-VAL-ARG-HIS-ALA-0QE, CHLORIDE ION, Rhomboid protease GlpG, ...
著者Vinothkumar, K.R.
登録日2017-01-06
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
5MT7
DownloadVisualize
BU of 5mt7 by Molmil
Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-VRHA-cmk
分子名称: ACE-VAL-ARG-HIS-ALA-0QE, Rhomboid protease GlpG
著者Vinothkumar, K.R.
登録日2017-01-06
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
4UQ8
DownloadVisualize
BU of 4uq8 by Molmil
Electron cryo-microscopy of bovine Complex I
分子名称: ACYL CARRIER PROTEIN, MITOCHONDRIAL, FE2/S2 (INORGANIC) CLUSTER, ...
著者Vinothkumar, K.R, Zhu, J, Hirst, J.
登録日2014-06-21
公開日2014-10-01
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.95 Å)
主引用文献Architecture of Mammalian Respiratory Complex I.
Nature, 515, 2014
2XOW
DownloadVisualize
BU of 2xow by Molmil
Structure of GlpG in complex with a mechanism-based isocoumarin inhibitor
分子名称: 5-AMINO-2-(2-METHOXY-2-OXOETHYL)BENZOIC ACID, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
登録日2010-08-24
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献The Structural Basis for Catalysis and Substrate Specificity of a Rhomboid Protease
Embo J., 29, 2010
2XOV
DownloadVisualize
BU of 2xov by Molmil
Crystal Structure of E.coli rhomboid protease GlpG, native enzyme
分子名称: GLYCEROL, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
登録日2010-08-24
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The structural basis for catalysis and substrate specificity of a rhomboid protease.
EMBO J., 29, 2010
2XTU
DownloadVisualize
BU of 2xtu by Molmil
Structure of E.coli rhomboid protease GlpG active site mutant, S201T in trigonal crystal form
分子名称: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of Rhomboid Protease in a Lipid Environment
J.Mol.Biol., 407, 2011
2XTV
DownloadVisualize
BU of 2xtv by Molmil
Structure of E.coli rhomboid protease GlpG, active site mutant, S201T, orthorhombic crystal form
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, RHOMBOID PROTEASE GLPG
著者Vinothkumar, K.R.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of rhomboid protease in a lipid environment.
J. Mol. Biol., 407, 2011
7FD9
DownloadVisualize
BU of 7fd9 by Molmil
Thermostabilised full length human mGluR5-5M with orthosteric antagonist, LY341495
分子名称: 2-[(1S,2S)-2-carboxycyclopropyl]-3-(9H-xanthen-9-yl)-D-alanine, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 5
著者Vinothkumar, K.R, Cannone, G, Lebon, G.
登録日2021-07-16
公開日2021-09-08
最終更新日2021-10-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations.
Cell Rep, 36, 2021
7FD8
DownloadVisualize
BU of 7fd8 by Molmil
Thermostabilised full length human mGluR5-5M bound with L-quisqualic acid
分子名称: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
著者Vinothkumar, K.R, Cannone, G, Lebon, G.
登録日2021-07-16
公開日2021-09-08
最終更新日2021-10-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations.
Cell Rep, 36, 2021
3BOY
DownloadVisualize
BU of 3boy by Molmil
Crystal structure of the HutP antitermination complex bound to the HUT mRNA
分子名称: 5'-R(*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ...
著者Kumarevel, T.S, Balasundaresan, D, Jeyakanthan, J, Shinkai, A, Yokoyama, S, Kumar, P.K.R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-12-18
公開日2008-01-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of HutP complexed with the 55-mer RNA
To be Published
1WRQ
DownloadVisualize
BU of 1wrq by Molmil
Crystal Structure of HutP-Antitermination complex
分子名称: 5'-R(*UP*UP*UP*AP*GP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ...
著者Kumarevel, T, Mizuno, H, Kumar, P.K.R.
登録日2004-10-25
公開日2005-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the HutP-antitermination complex
To be published

 

123>

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon