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PDB: 50 results

3U4Q
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BU of 3u4q by Molmil
Structure of AddAB-DNA complex at 2.8 angstroms
Descriptor: 1,2-ETHANEDIOL, ATP-dependent helicase/deoxyribonuclease subunit B, ATP-dependent helicase/nuclease subunit A, ...
Authors:Saikrishnan, K, Krajewski, W, Wigley, D.
Deposit date:2011-10-10
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into Chi recognition from the structure of an AddAB-type helicase-nuclease complex.
Embo J., 31, 2012
5SSX
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BU of 5ssx by Molmil
Crystal Structure human formylglycine generating enzyme E130D mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COPPER (I) ION, ...
Authors:Radhakrishnan, K, Schlotawa, L, Rudolph, M.G.
Deposit date:2022-08-12
Release date:2023-08-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Crystal Structure of human formylglycine generating enzyme E130D mutant
To be published
5SSY
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BU of 5ssy by Molmil
Crystal Structure of human formylglycine generating enzyme
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COPPER (I) ION, ...
Authors:Radhakrishnan, K, Schlotawa, L, Rudolph, M.G.
Deposit date:2022-08-12
Release date:2023-08-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal Structure of human formylglycine generating enzyme in complex with N-acetyl-cysteine methylester
To be published
1YZ2
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BU of 1yz2 by Molmil
Solution structure of Am2766
Descriptor: Delta-conotoxin Am 2766
Authors:Sarma, S.P, Kumar, G.S, Sudarslal, S, Iengar, P, Sikdar, S.K, Krishnan, K.S, Balaram, P.
Deposit date:2005-02-26
Release date:2006-02-07
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Solution Structure of delta-Am2766: A Highly Hydrophobic delta-Conotoxin from Conus amadis That Inhibits Inactivation of Neuronal Voltage-Gated Sodium Channels
CHEM.BIODIVERS., 2, 2005
2M61
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BU of 2m61 by Molmil
NMR and Mass Spectrometric Studies of M-2 Branch Mini-M Conotoxins from Indian Cone Snails
Descriptor: Conotoxin Ar1446
Authors:Sarma, S.P, Rajesh, R.P, Kumar, G.S, Sudarslal, S, Sabareesh, V, Gowd, K.H, Gupta, K, Krishnan, K.S, Balaram, P.
Deposit date:2013-03-18
Release date:2014-04-16
Method:SOLUTION NMR
Cite:NMR and Mass Spectrometric Studies of M-2 Branch Mini-M Conotoxins from Indian Cone Snails
To be Published
4C7A
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BU of 4c7a by Molmil
Crystal structure of the Smoothened CRD, selenomethionine-labeled
Descriptor: SMOOTHENED, SODIUM ION, ZINC ION
Authors:Nachtergaele, S, Whalen, D.M, Mydock, L.K, Zhao, Z, Malinauskas, T, Krishnan, K, Ingham, P.W, Covey, D.F, Rohatgi, R, Siebold, C.
Deposit date:2013-09-20
Release date:2013-11-06
Last modified:2013-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Function of the Smoothened Extracellular Domain in Vertebrate Hedgehog Signaling
Elife, 2, 2013
4C79
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BU of 4c79 by Molmil
Crystal structure of the Smoothened CRD, native
Descriptor: SMOOTHENED, SODIUM ION, ZINC ION
Authors:Nachtergaele, S, Whalen, D.M, Mydock, L.K, Zhao, Z, Malinauskas, T, Krishnan, K, Ingham, P.W, Covey, D.F, Rohatgi, R, Siebold, C.
Deposit date:2013-09-20
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structure and Function of the Smoothened Extracellular Domain in Vertebrate Hedgehog Signaling
Elife, 2, 2013
4XQK
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BU of 4xqk by Molmil
ATP-dependent Type ISP restriction-modification enzyme LlaBIII bound to DNA
Descriptor: DNA (28-MER), LlaBIII, POTASSIUM ION
Authors:Chand, M.K, Saikrishnan, K.
Deposit date:2015-01-19
Release date:2015-09-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Translocation-coupled DNA cleavage by the Type ISP restriction-modification enzymes
Nat.Chem.Biol., 11, 2015
7NFU
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BU of 7nfu by Molmil
Crystal structure of C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
Descriptor: GLYCEROL, Nucleoid occlusion protein, SULFATE ION
Authors:Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
Deposit date:2021-02-07
Release date:2021-02-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
7NG0
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BU of 7ng0 by Molmil
Crystal structure of N- and C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
Descriptor: Nucleoid occlusion protein, SULFATE ION
Authors:Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
Deposit date:2021-02-08
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
8IJO
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BU of 8ijo by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: Y41F-L68F double mutant
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
Authors:Adhav, V.A, Saikrishnan, K.
Deposit date:2023-02-27
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
8IK4
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BU of 8ik4 by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to hemimethylated DNA: L68F mutant
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*AP*GP*AP*(5CM)P*CP*GP*GP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*TP*CP*T)-3'), ...
Authors:Adhav, V.A, Saikrishnan, K.
Deposit date:2023-02-28
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
8IJP
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BU of 8ijp by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68Y mutant
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
Authors:Adhav, V.A, Saikrishnan, K.
Deposit date:2023-02-27
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
8IK8
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BU of 8ik8 by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68F mutant
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
Authors:Adhav, V.A, Saikrishnan, K.
Deposit date:2023-02-28
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
8IKD
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BU of 8ikd by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: Y41F-L68Y double mutant
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
Authors:Adhav, V.A, Saikrishnan, K.
Deposit date:2023-02-28
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
6HZ5
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BU of 6hz5 by Molmil
Structure of McrBC without DNA binding domains (Class 1)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ8
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BU of 6hz8 by Molmil
Structure of McrBC without DNA binding domains (Class 4)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ9
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BU of 6hz9 by Molmil
Structure of McrBC without DNA binding domains (Class 5)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ7
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BU of 6hz7 by Molmil
Structure of McrBC without DNA binding domains (Class 3)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ6
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BU of 6hz6 by Molmil
Structure of McrBC without DNA binding domains (Class 2)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ4
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BU of 6hz4 by Molmil
Structure of McrBC without DNA binding domains (one half of the full complex)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
1X1V
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BU of 1x1v by Molmil
Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex
Descriptor: HEXANE-1,6-DIOL, ZINC ION, lectin, ...
Authors:Singh, D.D, Saikrishnan, K, Kumar, P, Surolia, A, Sekar, K, Vijayan, M.
Deposit date:2005-04-14
Release date:2005-11-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Unusual sugar specificity of banana lectin from Musa paradisiaca and its probable evolutionary origin. Crystallographic and modelling studies
Glycobiology, 15, 2005
7DSU
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BU of 7dsu by Molmil
Structure of Mod subunit of the Type III restriction-modification enzyme Mbo45V
Descriptor: 1,2-ETHANEDIOL, Mbo45V, SINEFUNGIN
Authors:Ahmed, I, Chouhan, O.P, Gopinath, A, Morgan, R.D, Bhagat, K, Singh, A, Saikrishnan, K.
Deposit date:2021-01-02
Release date:2022-01-05
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of Mod subunit of the Type III restriction-modification enzyme Mbo45V
To Be Published
2UV1
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BU of 2uv1 by Molmil
Hexagonal crystal form of GamS from bacteriophage lambda.
Descriptor: HOST-NUCLEASE INHIBITOR PROTEIN GAM
Authors:Court, R.I, Cook, N, Saikrishnan, K, Wigley, D.B.
Deposit date:2007-03-08
Release date:2007-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Crystal Structure of Lambda-Gam Protein Suggests a Model for Recbcd Inhibition.
J.Mol.Biol., 371, 2007
2UUZ
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BU of 2uuz by Molmil
Orthorhombic crystal form of GamS from bacteriophage lambda.
Descriptor: HOST-NUCLEASE INHIBITOR PROTEIN GAM
Authors:Court, R.I, Cook, N, Saikrishnan, K, Wigley, D.B.
Deposit date:2007-03-08
Release date:2007-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of Lambda-Gam Protein Suggests a Model for Recbcd Inhibition.
J.Mol.Biol., 371, 2007
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