6MWN
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6XJY
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6XJQ
| Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate | Descriptor: | 2-{[(4R)-4-hydroxyhexyl]oxy}ethyl 5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoate, Fab HAVx Heavy Chain, Fab HAVx Light Chain, ... | Authors: | Koirala, D, Piccirilli, J.A. | Deposit date: | 2020-06-24 | Release date: | 2022-01-19 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (1.708 Å) | Cite: | Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol., 18, 2022
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6XJZ
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6XJW
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6U8D
| Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV2 | Descriptor: | Heavy chain of Fab HCV2, JIIIabc RNA (68-MER), Light chain of Fab HCV2 | Authors: | Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A. | Deposit date: | 2019-09-04 | Release date: | 2019-12-04 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (1.807 Å) | Cite: | Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation. Acs Chem.Biol., 15, 2020
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6U8K
| Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3 | Descriptor: | Heavy chain of Fab HCV3, JIIIabc RNA (68-MER), Light chain of Fab HCV3 | Authors: | Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A. | Deposit date: | 2019-09-05 | Release date: | 2019-12-04 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.75 Å) | Cite: | Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation. Acs Chem.Biol., 15, 2020
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8DP3
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8T2B
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8T2O
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8T2A
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8T29
| Crystal structure of SCV PTE RNA in complex with Fab BL3-6 | Descriptor: | BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER) | Authors: | Ojha, M, Koirala, D. | Deposit date: | 2023-06-05 | Release date: | 2024-01-10 | Last modified: | 2024-07-24 | Method: | X-RAY DIFFRACTION (3.13 Å) | Cite: | Structure of saguaro cactus virus 3' translational enhancer mimics 5' cap for eIF4E binding. Proc.Natl.Acad.Sci.USA, 121, 2024
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6B3K
| Crystal structure of mutant Spinach RNA aptamer in complex with Fab BL3-6 | Descriptor: | Heavy chain of Fab BL3-6, Light chain of Fab BL3-6, MAGNESIUM ION, ... | Authors: | DasGupta, S, Koirala, D, Shelke, S.A, Piccirilli, J.A. | Deposit date: | 2017-09-22 | Release date: | 2017-12-27 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.09 Å) | Cite: | Affinity maturation of a portable Fab-RNA module for chaperone-assisted RNA crystallography. Nucleic Acids Res., 46, 2018
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8VMB
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8VM8
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8VMA
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8VM9
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