Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 13 件
6U8K
DownloadVisualize
BU of 6u8k by Molmil
Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3
分子名称: Heavy chain of Fab HCV3, JIIIabc RNA (68-MER), Light chain of Fab HCV3
著者Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A.
登録日2019-09-05
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Acs Chem.Biol., 15, 2020
6MWN
DownloadVisualize
BU of 6mwn by Molmil
Crystal structure of hepatitis A virus IRES domain V in complex with Fab HAVx
分子名称: Fab HAVx Heavy Chain, Fab HAVx Light Chain, HAV dV RNA (92-MER)
著者Koirala, D, Shao, Y, Piccirilli, J.A.
登録日2018-10-29
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.838 Å)
主引用文献A conserved RNA structural motif for organizing topology within picornaviral internal ribosome entry sites.
Nat Commun, 10, 2019
6U8D
DownloadVisualize
BU of 6u8d by Molmil
Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV2
分子名称: Heavy chain of Fab HCV2, JIIIabc RNA (68-MER), Light chain of Fab HCV2
著者Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A.
登録日2019-09-04
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.807 Å)
主引用文献Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Acs Chem.Biol., 15, 2020
6XJQ
DownloadVisualize
BU of 6xjq by Molmil
Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate
分子名称: 2-{[(4R)-4-hydroxyhexyl]oxy}ethyl 5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoate, Fab HAVx Heavy Chain, Fab HAVx Light Chain, ...
著者Koirala, D, Piccirilli, J.A.
登録日2020-06-24
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.708 Å)
主引用文献Structural basis for substrate binding and catalysis by a self-alkylating ribozyme.
Nat.Chem.Biol., 18, 2022
6XJW
DownloadVisualize
BU of 6xjw by Molmil
Crystal structure of a self-alkylating ribozyme - alkylated form without biotin moiety
分子名称: 2-{[(4R)-4-hydroxyhexyl]oxy}ethyl pentanoate, Fab HAVx Heavy Chain, Fab HAVx Light Chain, ...
著者Koirala, D, Piccirilli, J.A.
登録日2020-06-24
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.918 Å)
主引用文献Structural basis for substrate binding and catalysis by a self-alkylating ribozyme.
Nat.Chem.Biol., 18, 2022
6XJZ
DownloadVisualize
BU of 6xjz by Molmil
Crystal structure of a self-alkylating ribozyme - apo form
分子名称: Fab HAVx Heavy Chain, Fab HAVx Light Chain, Self-alkylating ribozyme (58-MER)
著者Koirala, D, Piccirilli, J.A.
登録日2020-06-24
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.488 Å)
主引用文献Structural basis for substrate binding and catalysis by a self-alkylating ribozyme.
Nat.Chem.Biol., 18, 2022
6XJY
DownloadVisualize
BU of 6xjy by Molmil
Crystal structure of a self-alkylating ribozyme - short time incubation with the epoxide substrate
分子名称: Fab HAVx Heavy Chain, Fab HAVx Light Chain, Self-alkylating ribozyme (58-MER)
著者Koirala, D, Piccirilli, J.A.
登録日2020-06-24
公開日2022-01-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.156 Å)
主引用文献Structural basis for substrate binding and catalysis by a self-alkylating ribozyme.
Nat.Chem.Biol., 18, 2022
8DP3
DownloadVisualize
BU of 8dp3 by Molmil
Crystal structure of coxsackievirus B3 cloverleaf RNA replication element
分子名称: Fab BL3-6 Heavy Chain, Fab BL3-6 Light Chain, PHOSPHATE ION, ...
著者Das, N.K, Koirala, D.
登録日2022-07-14
公開日2023-04-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of a highly conserved enteroviral 5' cloverleaf RNA replication element.
Nat Commun, 14, 2023
8T29
DownloadVisualize
BU of 8t29 by Molmil
Crystal structure of SCV PTE RNA in complex with Fab BL3-6
分子名称: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
著者Ojha, M, Koirala, D.
登録日2023-06-05
公開日2024-01-10
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Crystal structure of SCV PTE RNA in complex with Fab BL3-6
To Be Published
8T2A
DownloadVisualize
BU of 8t2a by Molmil
Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6
分子名称: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
著者Ojha, M, Koirala, D.
登録日2023-06-05
公開日2024-01-10
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Crystal structure of SCV PTE G18A mutant RNA in complex with Fab BL3-6
To Be Published
8T2O
DownloadVisualize
BU of 8t2o by Molmil
Crystal structure of SCV PTE G18U RNA in complex with Fab BL3-6
分子名称: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
著者Ojha, M, Koirala, D.
登録日2023-06-06
公開日2024-01-10
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Crystal structure of SCV PTE G18U RNA in complex with Fab BL3-6
To Be Published
8T2B
DownloadVisualize
BU of 8t2b by Molmil
Crystal structure of SCV PTE G18C mutant RNA in complex with Fab BL3-6
分子名称: BL3-6 Fab heavy chain, BL3-6 Fab light chain, RNA (90-MER)
著者Ojha, M, Koirala, D.
登録日2023-06-05
公開日2024-01-10
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Crystal structure of SCV PTE G18C mutant RNA in complex with Fab BL3-6
To Be Published
6B3K
DownloadVisualize
BU of 6b3k by Molmil
Crystal structure of mutant Spinach RNA aptamer in complex with Fab BL3-6
分子名称: Heavy chain of Fab BL3-6, Light chain of Fab BL3-6, MAGNESIUM ION, ...
著者DasGupta, S, Koirala, D, Shelke, S.A, Piccirilli, J.A.
登録日2017-09-22
公開日2017-12-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Affinity maturation of a portable Fab-RNA module for chaperone-assisted RNA crystallography.
Nucleic Acids Res., 46, 2018

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon