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PDB: 89 results

1EPI
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THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
2HSP
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SOLUTION STRUCTURE OF THE SH3 DOMAIN OF PHOSPHOLIPASE CGAMMA
Descriptor: PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN)
Authors:Kohda, D, Hatanaka, H, Odaka, M, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of phospholipase C-gamma.
Cell(Cambridge,Mass.), 72, 1993
1EPJ
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BU of 1epj by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
1EPG
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BU of 1epg by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
1EPH
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BU of 1eph by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Kohda, D, Inagaki, F.
Deposit date:1992-03-24
Release date:1994-01-31
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
1TCG
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BU of 1tcg by Molmil
STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Kohda, D, Lancelin, J.-M, Inagaki, F, Wakamatsu, K.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2025-03-26
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1TCJ
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STRUCTURE-ACTIVITY RELATIONSHIPS OF MU-CONOTOXIN GIIIA: STRUCTURE DETERMINATION OF ACTIVE AND INACTIVE SODIUM CHANNEL BLOCKER PEPTIDES BY NMR AND SIMULATED ANNEALING CALCULATIONS
Descriptor: MU-CONOTOXIN GIIIA
Authors:Kohda, D, Lancelin, J.-M, Inagaki, F, Wakamatsu, K.
Deposit date:1992-12-12
Release date:1994-01-31
Last modified:2025-03-26
Method:SOLUTION NMR
Cite:Structure-activity relationships of mu-conotoxin GIIIA: structure determination of active and inactive sodium channel blocker peptides by NMR and simulated annealing calculations.
Biochemistry, 31, 1992
1HSQ
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BU of 1hsq by Molmil
SOLUTION STRUCTURE OF THE SH3 DOMAIN OF PHOSPHOLIPASE CGAMMA
Descriptor: PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN)
Authors:Kohda, D, Hatanaka, H, Odaka, M, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of phospholipase C-gamma.
Cell(Cambridge,Mass.), 72, 1993
5Z5Q
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Nukacin ISK-1 in active state
Descriptor: Lantibiotic nukacin
Authors:Kohda, D, Fujinami, D.
Deposit date:2018-01-19
Release date:2018-11-28
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:The lantibiotic nukacin ISK-1 exists in an equilibrium between active and inactive lipid-II binding states.
Commun Biol, 1, 2018
1GFD
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BU of 1gfd by Molmil
SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2
Descriptor: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kohda, D, Terasawa, H, Hatanaka, H, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and ligand-binding site of the carboxy-terminal SH3 domain of GRB2.
Structure, 2, 1994
1GFC
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BU of 1gfc by Molmil
SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2
Descriptor: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kohda, D, Terasawa, H, Hatanaka, H, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and ligand-binding site of the carboxy-terminal SH3 domain of GRB2.
Structure, 2, 1994
5Z5R
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BU of 5z5r by Molmil
Nukacin ISK-1 in inactive state
Descriptor: Lantibiotic nukacin
Authors:Kohda, D, Fujinami, D.
Deposit date:2018-01-19
Release date:2018-11-28
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:The lantibiotic nukacin ISK-1 exists in an equilibrium between active and inactive lipid-II binding states.
Commun Biol, 1, 2018
2MLO
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BU of 2mlo by Molmil
Human CCR2 Membrane-Proximal C-Terminal Region (PRO-C) in a Membrane bound form
Descriptor: MCP-1 receptor
Authors:Esaki, K, Yoshinaga, S, Tsuji, T, Toda, E, Terashima, Y, Saitoh, T, Kohda, D, Kohno, T, Osawa, M, Ueda, T, Shimada, I, Matsushima, K, Terasawa, H.
Deposit date:2014-03-04
Release date:2014-10-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the binding of the membrane-proximal C-terminal region of chemokine receptor CCR2 with the cytosolic regulator FROUNT.
Febs J., 281, 2014
7X4O
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BU of 7x4o by Molmil
Crystal structure of Vps17p PX from S. cerevisiae (Space)
Descriptor: SULFATE ION, Vacuolar protein sorting-associated protein 17
Authors:Maita, N, Kohda, D, Obita, T.
Deposit date:2022-03-03
Release date:2022-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of the PX domain of Vps17p from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 78, 2022
6K7F
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BU of 6k7f by Molmil
Crystal structure of MBPholo-Tim21 fusion protein with a 17-residue helical linker
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Mitochondrial import inner membrane translocase subunit TIM21, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Bala, S, Shimada, A, Kohda, D.
Deposit date:2019-06-07
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal contact-free conformation of an intrinsically flexible loop in protein crystal: Tim21 as the case study.
Biochim Biophys Acta Gen Subj, 1864, 2020
8WAF
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BU of 8waf by Molmil
Crystal structure of the C-terminal fragment (residues 756-982 with the C864S mutation) of Arabidopsis thaliana CHUP1
Descriptor: Protein CHUP1, chloroplastic
Authors:Shimada, A, Takano, A, Nakamura, Y, Kohda, D.
Deposit date:2023-09-07
Release date:2024-01-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:CHLOROPLAST UNUSUAL POSITIONING 1 is a plant-specific actin polymerization factor regulating chloroplast movement.
Plant Cell, 36, 2024
8WAG
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BU of 8wag by Molmil
Crystal structure of the C-terminal fragment (residues 716-982) of Arabidopsis thaliana CHUP1
Descriptor: Protein CHUP1, chloroplastic
Authors:Shimada, A, Nakamura, Y, Takano, A, Kohda, D.
Deposit date:2023-09-07
Release date:2024-01-17
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:CHLOROPLAST UNUSUAL POSITIONING 1 is a plant-specific actin polymerization factor regulating chloroplast movement.
Plant Cell, 36, 2024
8XSH
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BU of 8xsh by Molmil
Crystal structure of the Actinobacillus minor NM305 glucosyltransferase
Descriptor: Putative glycosyltransferase
Authors:Yamasaki, T, Kohda, D.
Deposit date:2024-01-09
Release date:2025-01-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the Actinobacillus minor NM305 glucosyltransferase
To Be Published
8XSG
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BU of 8xsg by Molmil
Crystal structure of the Actinobacillus minor NM305 glucosyltransferase in complex with UDP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative glycosyltransferase, URIDINE
Authors:Yamasaki, T, Kohda, D.
Deposit date:2024-01-09
Release date:2025-01-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Actinobacillus minor NM305 glucosyltransferase in complex with UDP
To Be Published
5YCQ
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BU of 5ycq by Molmil
Unique Specificity-Enhancing Factor for the AAA+ Lon Protease
Descriptor: Heat shock protein HspQ
Authors:Abe, Y, Shioi, S, Kita, S, Nakata, H, Maenaka, K, Kohda, D, Katayama, T, Ueda, T.
Deposit date:2017-09-08
Release date:2018-04-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:X-ray crystal structure of Escherichia coli HspQ, a protein involved in the retardation of replication initiation
FEBS Lett., 591, 2017
5GMY
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BU of 5gmy by Molmil
Crystal structure of the Archaeoglobus fulgidus oligosaccharyltransferase (O29867_ARCFU) tethered with an acceptor peptide containing the NVT sequon via a disulfide bond
Descriptor: MAGNESIUM ION, Transmembrane oligosaccharyl transferase, putative, ...
Authors:Matsumoto, S, Kohda, D.
Deposit date:2016-07-18
Release date:2017-02-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Tethering an N-Glycosylation Sequon-Containing Peptide Creates a Catalytically Competent Oligosaccharyltransferase Complex
Biochemistry, 56, 2017
7E9S
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BU of 7e9s by Molmil
Archaeal oligosaccharyltransferase AglB from Archaeoglobus fulgidus in complex with an inhibitory peptide and a dolichol-phosphate
Descriptor: (2R)-2,3-DIHYDROXYPROPYL (7Z)-TETRADEC-7-ENOATE, DI(HYDROXYETHYL)ETHER, Dolichyl-phosphooligosaccharide-protein glycotransferase 3, ...
Authors:Taguchi, Y, Hirata, K, Kohda, D.
Deposit date:2021-03-05
Release date:2021-09-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of an archaeal oligosaccharyltransferase provides insight into the strict exclusion of proline from the N-glycosylation sequon.
Commun Biol, 4, 2021
1K4U
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BU of 1k4u by Molmil
Solution structure of the C-terminal SH3 domain of p67phox complexed with the C-terminal tail region of p47phox
Descriptor: PHAGOCYTE NADPH OXIDASE SUBUNIT P47PHOX, PHAGOCYTE NADPH OXIDASE SUBUNIT P67PHOX
Authors:Kami, K, Takeya, R, Sumimoto, H, Kohda, D.
Deposit date:2001-10-08
Release date:2002-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Diverse recognition of non-PxxP peptide ligands by the SH3 domains from p67(phox), Grb2 and Pex13p.
EMBO J., 21, 2002
1L4V
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BU of 1l4v by Molmil
SOLUTION STRUCTURE OF SAPECIN
Descriptor: Sapecin
Authors:Hanzawa, H, Iwai, H, Takeuchi, K, Kuzuhara, T, Komano, H, Kohda, D, Inagaki, F, Natori, S, Arata, Y, Shimada, I.
Deposit date:2002-03-06
Release date:2002-03-27
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:1H nuclear magnetic resonance study of the solution conformation of an antibacterial protein, sapecin.
FEBS Lett., 269, 1990
1OM2
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BU of 1om2 by Molmil
SOLUTION NMR STRUCTURE OF THE MITOCHONDRIAL PROTEIN IMPORT RECEPTOR TOM20 FROM RAT IN A COMPLEX WITH A PRESEQUENCE PEPTIDE DERIVED FROM RAT ALDEHYDE DEHYDROGENASE (ALDH)
Descriptor: PROTEIN (MITOCHONDRIAL ALDEHYDE DEHYDROGENASE), PROTEIN (MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20)
Authors:Abe, Y, Shodai, T, Muto, T, Mihara, K, Torii, H, Nishikawa, S, Endo, T, Kohda, D.
Deposit date:1999-04-23
Release date:2000-02-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural basis of presequence recognition by the mitochondrial protein import receptor Tom20.
Cell(Cambridge,Mass.), 100, 2000

 

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